RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeastyeast

Gene RPN11, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN11YFR004W STL1P39932 569 aa6.04□□□□□ -1.44
RPN11YFR004W YER158CP40095 573 aa6.04□□□□□ -1.44
RPN11YFR004W YJR061WP40355 935 aa6.04□□□□□ -1.44
RPN11YFR004W MND2P40577 368 aa6.04□□□□□ -1.44
RPN11YFR004W UFE1P41834 346 aa6.04□□□□□ -1.44
RPN11YFR004W ERR3P42222 437 aa6.04□□□□□ -1.44
RPN11YFR004W AAD14P42884 376 aa6.04□□□□□ -1.44
RPN11YFR004W NUP85P46673 744 aa6.04□□□□□ -1.44
RPN11YFR004W COS6P53344 381 aa6.04□□□□□ -1.44
RPN11YFR004W SPO19Q03029 223 aa6.04□□□□□ -1.44
RPN11YFR004W CLU1Q03690 1277 aaKnown RBP6.04□□□□□ -1.44
RPN11YFR004W RTN1Q04947 295 aaKnown RBP6.04□□□□□ -1.44
RPN11YFR004W DDC1Q08949 612 aa6.04□□□□□ -1.44
RPN11YFR004W MEF1P25039 761 aa6.03□□□□□ -1.44
RPN11YFR004W YCL068CP25593 260 aa6.03□□□□□ -1.44
RPN11YFR004W SGE1P33335 543 aa6.03□□□□□ -1.44
RPN11YFR004W SIP2P34164 415 aaKnown RBP6.03□□□□□ -1.44
RPN11YFR004W HES1P35843 434 aa6.03□□□□□ -1.44
RPN11YFR004W CUE2P36075 443 aaKnown RBP6.03□□□□□ -1.44
RPN11YFR004W RIM2P38127 377 aa6.03□□□□□ -1.44
RPN11YFR004W BIT2P38346 545 aa6.03□□□□□ -1.44
RPN11YFR004W RIM11P38615 370 aa6.03□□□□□ -1.44
RPN11YFR004W CRP1P38845 465 aaKnown RBP6.03□□□□□ -1.44
RPN11YFR004W AIM18P38884 321 aa6.03□□□□□ -1.44
RPN11YFR004W JEM1P40358 645 aa6.03□□□□□ -1.44
RPN11YFR004W ATM1P40416 690 aa6.03□□□□□ -1.44
RPN11YFR004W DPH1P40487 425 aaKnown RBP6.03□□□□□ -1.44
RPN11YFR004W CDC1P40986 491 aa6.03□□□□□ -1.44
RPN11YFR004W SEC27P41811 889 aaKnown RBP6.03□□□□□ -1.44
RPN11YFR004W VEL1P53058 206 aa6.03□□□□□ -1.44
RPN11YFR004W YPR003CP53394 754 aa6.03□□□□□ -1.44
RPN11YFR004W NOP15P53927 220 aaPredicted RBP6.03□□□□□ -1.44
RPN11YFR004W TVP15Q03860 143 aa6.03□□□□□ -1.44
RPN11YFR004W YET2Q04210 160 aa6.03□□□□□ -1.44
RPN11YFR004W HRD3Q05787 833 aa6.03□□□□□ -1.44
RPN11YFR004W MRL1Q06815 381 aa6.03□□□□□ -1.44
RPN11YFR004W RCL1Q08096 367 aaPredicted RBP6.03□□□□□ -1.44
RPN11YFR004W AAD15Q08361 143 aa6.03□□□□□ -1.44
RPN11YFR004W YPR202WQ08993 238 aa6.03□□□□□ -1.44
RPN11YFR004W LDB17Q12342 491 aa6.03□□□□□ -1.44
RPN11YFR004W NKP1Q12493 238 aa6.03□□□□□ -1.44
RPN11YFR004W YMR030W-AQ3E760 96 aa6.03□□□□□ -1.44
RPN11YFR004W RGS2Q99188 309 aa6.03□□□□□ -1.44
RPN11YFR004W BRR2P32639 2163 aaKnown RBP6.02□□□□□ -1.45
RPN11YFR004W LEU1P07264 779 aaKnown RBP6.02□□□□□ -1.45
RPN11YFR004W ERG20P08524 352 aaKnown RBP6.02□□□□□ -1.45
RPN11YFR004W PRP6P19735 899 aaPredicted RBP6.02□□□□□ -1.45
RPN11YFR004W PHA2P32452 334 aa6.02□□□□□ -1.45
RPN11YFR004W GDA1P32621 518 aa6.02□□□□□ -1.45
RPN11YFR004W PPE1P38796 400 aa6.02□□□□□ -1.45
RPN11YFR004W SEC31P38968 1273 aaKnown RBP6.02□□□□□ -1.45
RPN11YFR004W FRT2P39734 528 aa6.02□□□□□ -1.45
RPN11YFR004W YAT2P40017 923 aa6.02□□□□□ -1.45
RPN11YFR004W YIL165CP40446 119 aa6.02□□□□□ -1.45
RPN11YFR004W IML2P47031 731 aa6.02□□□□□ -1.45
RPN11YFR004W KTR6P54070 446 aa6.02□□□□□ -1.45
RPN11YFR004W YPL062WQ02781 134 aa6.02□□□□□ -1.45
RPN11YFR004W PIR3Q03180 325 aa6.02□□□□□ -1.45
RPN11YFR004W TAF11Q04226 346 aa6.02□□□□□ -1.45
RPN11YFR004W ARP9Q05123 467 aa6.02□□□□□ -1.45
RPN11YFR004W ECM38Q05902 660 aaPredicted RBP6.02□□□□□ -1.45
RPN11YFR004W BCP1Q06338 283 aa6.02□□□□□ -1.45
RPN11YFR004W NTG2Q08214 380 aa6.02□□□□□ -1.45
RPN11YFR004W NRT1Q08485 598 aa6.02□□□□□ -1.45
RPN11YFR004W CIR2Q08822 631 aa6.02□□□□□ -1.45
RPN11YFR004W CHS5Q12114 671 aaKnown RBP6.02□□□□□ -1.45
RPN11YFR004W RUP1Q12242 671 aa6.02□□□□□ -1.45
RPN11YFR004W KCS1Q12494 1050 aa6.02□□□□□ -1.45
RPN11YFR004W EFG1Q3E705 233 aaKnown RBP6.02□□□□□ -1.45
RPN11YFR004W YPR089WO13585 888 aa6.01□□□□□ -1.45
RPN11YFR004W MET16P18408 261 aaPredicted RBP6.01□□□□□ -1.45
RPN11YFR004W MRPS28P21771 286 aa6.01□□□□□ -1.45
RPN11YFR004W SBA1P28707 216 aaKnown RBP6.01□□□□□ -1.45
RPN11YFR004W PMI40P29952 429 aaKnown RBP6.01□□□□□ -1.45
RPN11YFR004W SFP1P32432 683 aa6.01□□□□□ -1.45
RPN11YFR004W RML2P32611 393 aa6.01□□□□□ -1.45
RPN11YFR004W PEX5P35056 612 aa6.01□□□□□ -1.45
RPN11YFR004W SEA4P38164 1038 aa6.01□□□□□ -1.45
RPN11YFR004W TSC10P38342 320 aa6.01□□□□□ -1.45
RPN11YFR004W HOS4P40480 1083 aa6.01□□□□□ -1.45
RPN11YFR004W MAM33P40513 266 aa6.01□□□□□ -1.45
RPN11YFR004W GVP36P40531 326 aaKnown RBP6.01□□□□□ -1.45
RPN11YFR004W CNN1P43618 361 aa6.01□□□□□ -1.45
RPN11YFR004W MNN11P46985 422 aaKnown RBP6.01□□□□□ -1.45
RPN11YFR004W SKP1P52286 194 aa6.01□□□□□ -1.45
RPN11YFR004W PYK2P52489 506 aaKnown RBP6.01□□□□□ -1.45
RPN11YFR004W PEX31P53203 462 aa6.01□□□□□ -1.45
RPN11YFR004W YGR016WP53209 190 aa6.01□□□□□ -1.45
RPN11YFR004W VPS9P54787 451 aa6.01□□□□□ -1.45
RPN11YFR004W PEX13P80667 386 aa6.01□□□□□ -1.45
RPN11YFR004W RPM2Q02773 1202 aa6.01□□□□□ -1.45
RPN11YFR004W NOG1Q02892 647 aaKnown RBP6.01□□□□□ -1.45
RPN11YFR004W HDA2Q06629 674 aa6.01□□□□□ -1.45
RPN11YFR004W PMT7Q06644 662 aa6.01□□□□□ -1.45
RPN11YFR004W AAD4Q07747 329 aa6.01□□□□□ -1.45
RPN11YFR004W APC5Q08683 685 aa6.01□□□□□ -1.45
RPN11YFR004W CLP1Q08685 445 aaPredicted RBP6.01□□□□□ -1.45
RPN11YFR004W RTK1Q12100 620 aaPredicted RBP6.01□□□□□ -1.45
RPN11YFR004W TY1A-DR3Q12441 440 aa6.01□□□□□ -1.45
RPN11YFR004W TRA1P38811 3744 aa6□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms