RNA–Protein interactions for RNA: YFL028C

CAF16, Transcript of Part of evolutionarily-conserved CCR4-NOT regulatory complex, yeast

Gene CAF16, Length 870 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	YFL028C	YGL117W	P53133	265 aa		5.06	□□□□□ -1.6
CAF16	YFL028C	YGL036W	P53185	909 aa	Predicted RBP	5.06	□□□□□ -1.6
CAF16	YFL028C	YPL071C	Q02864	156 aa		5.06	□□□□□ -1.6
CAF16	YFL028C	UTP21	Q06078	939 aa	Predicted RBP	5.06	□□□□□ -1.6
CAF16	YFL028C	GPN2	Q08726	347 aa	Predicted RBP	5.06	□□□□□ -1.6
CAF16	YFL028C	BAG7	Q12128	409 aa		5.06	□□□□□ -1.6
CAF16	YFL028C	NMD4	Q12129	218 aa		5.06	□□□□□ -1.6
CAF16	YFL028C	SCM3	Q12334	223 aa		5.06	□□□□□ -1.6
CAF16	YFL028C	PMD1	P32634	1753 aa		5.06	□□□□□ -1.6
CAF16	YFL028C	LPD1	P09624	499 aa	Known RBP	5.05	□□□□□ -1.6
CAF16	YFL028C	CBS1	P14066	229 aa		5.05	□□□□□ -1.6
CAF16	YFL028C	CKA1	P15790	372 aa		5.05	□□□□□ -1.6
CAF16	YFL028C	VBA2	P38358	474 aa	Known RBP	5.05	□□□□□ -1.6
CAF16	YFL028C	SPO22	P40511	975 aa		5.05	□□□□□ -1.6
CAF16	YFL028C	IRC24	P40580	263 aa		5.05	□□□□□ -1.6
CAF16	YFL028C	SWP82	P43554	623 aa		5.05	□□□□□ -1.6
CAF16	YFL028C	EAF6	P47128	113 aa		5.05	□□□□□ -1.6
CAF16	YFL028C	DCP2	P53550	970 aa	Known RBP	5.05	□□□□□ -1.6
CAF16	YFL028C	AUR1	P36107	401 aa	Predicted RBP	5.04	□□□□□ -1.6
CAF16	YFL028C	NTR2	P36118	322 aa	Predicted RBP	5.04	□□□□□ -1.6
CAF16	YFL028C	NUP133	P36161	1157 aa		5.04	□□□□□ -1.6
CAF16	YFL028C	SRO77	P38163	1010 aa		5.04	□□□□□ -1.6
CAF16	YFL028C	REG2	P38232	338 aa		5.04	□□□□□ -1.6
CAF16	YFL028C	MUP3	P38734	546 aa		5.04	□□□□□ -1.6
CAF16	YFL028C	GLO1	P50107	326 aa		5.04	□□□□□ -1.6
CAF16	YFL028C	GND2	P53319	492 aa		5.04	□□□□□ -1.6
CAF16	YFL028C	YML037C	Q03703	340 aa		5.04	□□□□□ -1.6
CAF16	YFL028C	HRD3	Q05787	833 aa		5.04	□□□□□ -1.6
CAF16	YFL028C	YPL191C	Q08930	360 aa		5.04	□□□□□ -1.6
CAF16	YFL028C	MRH1	Q12117	320 aa	Predicted RBP	5.04	□□□□□ -1.6
CAF16	YFL028C	SSK22	P25390	1331 aa	Predicted RBP	5.03	□□□□□ -1.6
CAF16	YFL028C	RPL7A	P05737	244 aa	Known RBP	5.03	□□□□□ -1.6
CAF16	YFL028C	ILV2	P07342	687 aa	Known RBP	5.03	□□□□□ -1.6
CAF16	YFL028C	OCA4	P25366	362 aa		5.03	□□□□□ -1.6
CAF16	YFL028C	RAD24	P32641	659 aa		5.03	□□□□□ -1.6
CAF16	YFL028C	AFG3	P39925	761 aa		5.03	□□□□□ -1.6
CAF16	YFL028C	PSR1	Q07800	427 aa		5.03	□□□□□ -1.6
CAF16	YFL028C	RPL7B	Q12213	244 aa	Known RBP	5.03	□□□□□ -1.6
CAF16	YFL028C	SES1	P07284	462 aa	Known RBP	5.02	□□□□□ -1.61
CAF16	YFL028C	PCT1	P13259	424 aa		5.02	□□□□□ -1.61
CAF16	YFL028C	DAL5	P15365	543 aa		5.02	□□□□□ -1.61
CAF16	YFL028C	MOH1	P38191	138 aa		5.02	□□□□□ -1.61
CAF16	YFL028C	PFF1	P38244	976 aa		5.02	□□□□□ -1.61
CAF16	YFL028C	RPS7B	P48164	190 aa	Known RBP	5.02	□□□□□ -1.61
CAF16	YFL028C	CSI1	Q04368	295 aa		5.02	□□□□□ -1.61
CAF16	YFL028C	SPE4	Q12455	300 aa		5.02	□□□□□ -1.61
CAF16	YFL028C	PMA2	P19657	947 aa		5.01	□□□□□ -1.61
CAF16	YFL028C	SAT4	P25333	603 aa	Known RBP	5.01	□□□□□ -1.61
CAF16	YFL028C	SMY1	P32364	656 aa	Known RBP	5.01	□□□□□ -1.61
CAF16	YFL028C	EMP70	P32802	667 aa		5.01	□□□□□ -1.61
CAF16	YFL028C	SOF1	P33750	489 aa	Known RBP	5.01	□□□□□ -1.61
CAF16	YFL028C	MTH1	P35198	433 aa		5.01	□□□□□ -1.61
CAF16	YFL028C	LHS1	P36016	881 aa		5.01	□□□□□ -1.61
CAF16	YFL028C	UBP13	P38187	747 aa		5.01	□□□□□ -1.61
CAF16	YFL028C	UTP9	P38882	575 aa	Known RBP	5.01	□□□□□ -1.61
CAF16	YFL028C	BUR6	P40096	142 aa		5.01	□□□□□ -1.61
CAF16	YFL028C	OPT1	P40897	799 aa		5.01	□□□□□ -1.61
CAF16	YFL028C	RSM28	Q03430	361 aa		5.01	□□□□□ -1.61
CAF16	YFL028C	GIS1	Q03833	894 aa		5.01	□□□□□ -1.61
CAF16	YFL028C	TMN2	Q04562	672 aa		5.01	□□□□□ -1.61
CAF16	YFL028C	SPN1	Q06505	410 aa	Predicted RBP	5.01	□□□□□ -1.61
CAF16	YFL028C	DIB1	Q06819	143 aa	Predicted RBP	5.01	□□□□□ -1.61
CAF16	YFL028C	CYK3	Q07533	885 aa		5.01	□□□□□ -1.61
CAF16	YFL028C	GET3	Q12154	354 aa	Known RBP	5.01	□□□□□ -1.61
CAF16	YFL028C	SRP54	P20424	541 aa	Known RBP	5	□□□□□ -1.61
CAF16	YFL028C	ROX1	P25042	368 aa		5	□□□□□ -1.61
CAF16	YFL028C	AAD3	P25612	363 aa		5	□□□□□ -1.61
CAF16	YFL028C	YJU2	P28320	278 aa	Predicted RBP	5	□□□□□ -1.61
CAF16	YFL028C	OAR1	P35731	278 aa		5	□□□□□ -1.61
CAF16	YFL028C	BYE1	P36106	594 aa		5	□□□□□ -1.61
CAF16	YFL028C	AAP1	P37898	856 aa	Known RBP	5	□□□□□ -1.61
CAF16	YFL028C	AGP2	P38090	596 aa		5	□□□□□ -1.61
CAF16	YFL028C	RKM3	P38222	552 aa		5	□□□□□ -1.61
CAF16	YFL028C	RGI2	P40188	164 aa		5	□□□□□ -1.61
CAF16	YFL028C	GPD2	P41911	440 aa	Known RBP	5	□□□□□ -1.61
CAF16	YFL028C	YMR155W	Q03795	547 aa		5	□□□□□ -1.61
CAF16	YFL028C	BUD22	Q04347	519 aa	Known RBP	5	□□□□□ -1.61
CAF16	YFL028C	ARG7	Q04728	441 aa		5	□□□□□ -1.61
CAF16	YFL028C	ULA1	Q12059	462 aa		5	□□□□□ -1.61
CAF16	YFL028C	RTN2	Q12443	393 aa		5	□□□□□ -1.61
CAF16	YFL028C	YMR084W	A2P2R3	262 aa		4.99	□□□□□ -1.61
CAF16	YFL028C	RPS19A	P07280	144 aa	Known RBP	4.99	□□□□□ -1.61
CAF16	YFL028C	RPS19B	P07281	144 aa	Predicted RBP	4.99	□□□□□ -1.61
CAF16	YFL028C	ARD1	P07347	238 aa	Predicted RBP	4.99	□□□□□ -1.61
CAF16	YFL028C	HEM1	P09950	548 aa	Predicted RBP	4.99	□□□□□ -1.61
CAF16	YFL028C	VMA16	P23968	213 aa		4.99	□□□□□ -1.61
CAF16	YFL028C	LCB1	P25045	558 aa	Known RBP	4.99	□□□□□ -1.61
CAF16	YFL028C	YIH1	P25637	258 aa		4.99	□□□□□ -1.61
CAF16	YFL028C	PTC6	P25646	442 aa		4.99	□□□□□ -1.61
CAF16	YFL028C	YMC1	P32331	307 aa		4.99	□□□□□ -1.61
CAF16	YFL028C	ERG3	P32353	365 aa		4.99	□□□□□ -1.61
CAF16	YFL028C	PDB1	P32473	366 aa	Known RBP	4.99	□□□□□ -1.61
CAF16	YFL028C	UGP1	P32861	499 aa	Known RBP	4.99	□□□□□ -1.61
CAF16	YFL028C	KES1	P35844	434 aa	Known RBP	4.99	□□□□□ -1.61
CAF16	YFL028C	ADE17	P38009	592 aa	Known RBP	4.99	□□□□□ -1.61
CAF16	YFL028C	SEC31	P38968	1273 aa	Known RBP	4.99	□□□□□ -1.61
CAF16	YFL028C	MRX1	P40050	688 aa		4.99	□□□□□ -1.61
CAF16	YFL028C	ASG1	P40467	964 aa		4.99	□□□□□ -1.61
CAF16	YFL028C	MAF1	P41910	395 aa		4.99	□□□□□ -1.61
CAF16	YFL028C	TDA10	P42938	290 aa		4.99	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms