RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeastyeast

Gene RUB1, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUB1YDR139C YSA1Q01976 231 aa3.76□□□□□ -1.81
RUB1YDR139C MAK10Q02197 733 aa3.76□□□□□ -1.81
RUB1YDR139C ATG26Q06321 1198 aa3.76□□□□□ -1.81
RUB1YDR139C VIP1Q06685 1146 aaKnown RBP3.76□□□□□ -1.81
RUB1YDR139C RPL19AP0CX82 189 aaKnown RBP3.75□□□□□ -1.81
RUB1YDR139C RPL19BP0CX83 189 aaPredicted RBP3.75□□□□□ -1.81
RUB1YDR139C ADH7P25377 361 aa3.75□□□□□ -1.81
RUB1YDR139C CHS3P29465 1165 aa3.75□□□□□ -1.81
RUB1YDR139C YEL068CP39977 110 aa3.75□□□□□ -1.81
RUB1YDR139C TES1P41903 349 aaKnown RBP3.75□□□□□ -1.81
RUB1YDR139C YMR254CQ04838 102 aa3.75□□□□□ -1.81
RUB1YDR139C YDL218WQ07629 317 aa3.75□□□□□ -1.81
RUB1YDR139C CDC16P09798 840 aa3.74□□□□□ -1.81
RUB1YDR139C PDR3P33200 976 aa3.74□□□□□ -1.81
RUB1YDR139C MAL33P38157 468 aa3.74□□□□□ -1.81
RUB1YDR139C YBL029WP38201 376 aa3.74□□□□□ -1.81
RUB1YDR139C RKM3P38222 552 aa3.74□□□□□ -1.81
RUB1YDR139C PHO90P39535 881 aa3.74□□□□□ -1.81
RUB1YDR139C ELO1P39540 310 aa3.74□□□□□ -1.81
RUB1YDR139C YIL060WP40519 144 aa3.74□□□□□ -1.81
RUB1YDR139C LYS14P40971 790 aa3.74□□□□□ -1.81
RUB1YDR139C SGM1P47166 707 aa3.74□□□□□ -1.81
RUB1YDR139C STR3P53101 465 aaKnown RBP3.74□□□□□ -1.81
RUB1YDR139C EKI1Q03764 534 aa3.74□□□□□ -1.81
RUB1YDR139C EMI2Q04409 500 aaKnown RBP3.74□□□□□ -1.81
RUB1YDR139C RSF1Q05043 376 aa3.74□□□□□ -1.81
RUB1YDR139C LEU9Q12166 604 aaKnown RBP3.74□□□□□ -1.81
RUB1YDR139C PGS1P25578 521 aa3.73□□□□□ -1.81
RUB1YDR139C MUD2P36084 527 aaKnown RBP3.73□□□□□ -1.81
RUB1YDR139C TSC10P38342 320 aa3.73□□□□□ -1.81
RUB1YDR139C DBP8P38719 431 aa3.73□□□□□ -1.81
RUB1YDR139C RTS2P40962 232 aa3.73□□□□□ -1.81
RUB1YDR139C DIG1Q03063 452 aaKnown RBP3.73□□□□□ -1.81
RUB1YDR139C FMP42Q04991 504 aa3.73□□□□□ -1.81
RUB1YDR139C ADE13Q05911 482 aaKnown RBP3.73□□□□□ -1.81
RUB1YDR139C APL5Q08951 932 aaKnown RBP3.73□□□□□ -1.81
RUB1YDR139C YBR126W-AQ8TGU7 68 aa3.73□□□□□ -1.81
RUB1YDR139C ARG81P05085 880 aa3.72□□□□□ -1.81
RUB1YDR139C GID7P25569 745 aa3.72□□□□□ -1.81
RUB1YDR139C MGR1P25573 417 aa3.72□□□□□ -1.81
RUB1YDR139C PAH1P32567 862 aa3.72□□□□□ -1.81
RUB1YDR139C AUR1P36107 401 aaPredicted RBP3.72□□□□□ -1.81
RUB1YDR139C EFM2P38347 419 aa3.72□□□□□ -1.81
RUB1YDR139C UBA4P38820 440 aa3.72□□□□□ -1.81
RUB1YDR139C ANS1P38832 159 aa3.72□□□□□ -1.81
RUB1YDR139C SVL3Q03088 825 aaKnown RBP3.72□□□□□ -1.81
RUB1YDR139C YKU80Q04437 629 aa3.72□□□□□ -1.81
RUB1YDR139C GRS2Q06817 618 aa3.72□□□□□ -1.81
RUB1YDR139C ETT1Q08421 412 aaKnown RBP3.72□□□□□ -1.81
RUB1YDR139C RDR1Q08904 546 aa3.72□□□□□ -1.81
RUB1YDR139C HUA2Q12134 243 aa3.72□□□□□ -1.81
RUB1YDR139C TOP1P04786 769 aa3.71□□□□□ -1.82
RUB1YDR139C ARP1P38696 384 aa3.71□□□□□ -1.82
RUB1YDR139C RGI2P40188 164 aa3.71□□□□□ -1.82
RUB1YDR139C SAD1P43589 448 aa3.71□□□□□ -1.82
RUB1YDR139C FAR3P46671 204 aa3.71□□□□□ -1.82
RUB1YDR139C LYS4P49367 693 aaPredicted RBP3.71□□□□□ -1.82
RUB1YDR139C SCS3P53012 380 aa3.71□□□□□ -1.82
RUB1YDR139C ERG26P53199 349 aaKnown RBP3.71□□□□□ -1.82
RUB1YDR139C YGR127WP53275 312 aa3.71□□□□□ -1.82
RUB1YDR139C SOL4P53315 255 aa3.71□□□□□ -1.82
RUB1YDR139C BUD22Q04347 519 aaKnown RBP3.71□□□□□ -1.82
RUB1YDR139C TDA9Q04545 1251 aa3.71□□□□□ -1.82
RUB1YDR139C DPB4Q04603 196 aaKnown RBP3.71□□□□□ -1.82
RUB1YDR139C YLR352WQ06479 807 aa3.71□□□□□ -1.82
RUB1YDR139C ECM30Q06673 1274 aa3.71□□□□□ -1.82
RUB1YDR139C GRC3Q07845 632 aa3.71□□□□□ -1.82
RUB1YDR139C YDR056CQ12025 205 aa3.71□□□□□ -1.82
RUB1YDR139C TAH18Q12181 623 aa3.71□□□□□ -1.82
RUB1YDR139C NOP58Q12499 511 aaKnown RBP3.71□□□□□ -1.82
RUB1YDR139C SEM1O94742 89 aa3.7□□□□□ -1.82
RUB1YDR139C PUT2P07275 575 aa3.7□□□□□ -1.82
RUB1YDR139C ARD1P07347 238 aaPredicted RBP3.7□□□□□ -1.82
RUB1YDR139C KAR3P17119 729 aa3.7□□□□□ -1.82
RUB1YDR139C HNM1P19807 563 aa3.7□□□□□ -1.82
RUB1YDR139C YCK1P23291 538 aa3.7□□□□□ -1.82
RUB1YDR139C GFD2P25370 566 aaKnown RBP3.7□□□□□ -1.82
RUB1YDR139C YIH1P25637 258 aa3.7□□□□□ -1.82
RUB1YDR139C RPN2P32565 945 aaKnown RBP3.7□□□□□ -1.82
RUB1YDR139C SAC6P32599 642 aaKnown RBP3.7□□□□□ -1.82
RUB1YDR139C RAD24P32641 659 aa3.7□□□□□ -1.82
RUB1YDR139C NOP16P40007 231 aaKnown RBP3.7□□□□□ -1.82
RUB1YDR139C FET5P43561 622 aa3.7□□□□□ -1.82
RUB1YDR139C DUO1P53168 247 aaKnown RBP3.7□□□□□ -1.82
RUB1YDR139C PKP2P53170 491 aa3.7□□□□□ -1.82
RUB1YDR139C EFM6P53970 246 aa3.7□□□□□ -1.82
RUB1YDR139C NUP100Q02629 959 aa3.7□□□□□ -1.82
RUB1YDR139C YML037CQ03703 340 aa3.7□□□□□ -1.82
RUB1YDR139C YDR415CQ04033 374 aaPredicted RBP3.7□□□□□ -1.82
RUB1YDR139C TEN1Q07921 160 aa3.7□□□□□ -1.82
RUB1YDR139C ENT1Q12518 454 aa3.7□□□□□ -1.82
RUB1YDR139C SNF3P10870 884 aa3.69□□□□□ -1.82
RUB1YDR139C YUR1P26725 428 aa3.69□□□□□ -1.82
RUB1YDR139C ERG7P38604 731 aa3.69□□□□□ -1.82
RUB1YDR139C BZZ1P38822 633 aa3.69□□□□□ -1.82
RUB1YDR139C YND1P40009 630 aa3.69□□□□□ -1.82
RUB1YDR139C YAT2P40017 923 aa3.69□□□□□ -1.82
RUB1YDR139C TMA108P40462 946 aa3.69□□□□□ -1.82
RUB1YDR139C PTR3P43606 678 aa3.69□□□□□ -1.82
RUB1YDR139C RPS10BP46784 105 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms