RNA–Protein interactions for RNA: YDR138W

HPR1, Transcript of Subunit of THO/TREX complexes, yeast

Gene HPR1, Length 2,259 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HPR1	YDR138W	FMS1	P50264	508 aa		4.24	□□□□□ -1.73
HPR1	YDR138W	OCA1	P50946	238 aa	Predicted RBP	4.24	□□□□□ -1.73
HPR1	YDR138W	VID30	P53076	958 aa		4.24	□□□□□ -1.73
HPR1	YDR138W	MSC1	Q03104	513 aa		4.24	□□□□□ -1.73
HPR1	YDR138W	TRS23	Q03784	219 aa		4.24	□□□□□ -1.73
HPR1	YDR138W	RAD33	Q04231	177 aa		4.24	□□□□□ -1.73
HPR1	YDR138W	UFO1	Q04511	668 aa		4.24	□□□□□ -1.73
HPR1	YDR138W	YML053C	Q04978	212 aa		4.24	□□□□□ -1.73
HPR1	YDR138W	SAC3	P46674	1301 aa		4.23	□□□□□ -1.73
HPR1	YDR138W	AAC1	P04710	309 aa		4.23	□□□□□ -1.73
HPR1	YDR138W	RPL1A	P0CX43	217 aa	Known RBP	4.23	□□□□□ -1.73
HPR1	YDR138W	RPL1B	P0CX44	217 aa	Known RBP	4.23	□□□□□ -1.73
HPR1	YDR138W	MUP3	P38734	546 aa		4.23	□□□□□ -1.73
HPR1	YDR138W	REV7	P38927	245 aa		4.23	□□□□□ -1.73
HPR1	YDR138W	YFR020W	P43600	232 aa		4.23	□□□□□ -1.73
HPR1	YDR138W	DLD2	P46681	530 aa	Known RBP	4.23	□□□□□ -1.73
HPR1	YDR138W	ECM27	P47144	725 aa		4.23	□□□□□ -1.73
HPR1	YDR138W	INP52	P50942	1183 aa		4.23	□□□□□ -1.73
HPR1	YDR138W	YOR352W	Q08816	343 aa		4.23	□□□□□ -1.73
HPR1	YDR138W	BAG7	Q12128	409 aa		4.23	□□□□□ -1.73
HPR1	YDR138W	MET3	P08536	511 aa		4.23	□□□□□ -1.73
HPR1	YDR138W	RRP43	P25359	394 aa	Predicted RBP	4.23	□□□□□ -1.73
HPR1	YDR138W	SSE2	P32590	693 aa	Known RBP	4.23	□□□□□ -1.73
HPR1	YDR138W	UIP5	P36137	443 aa		4.23	□□□□□ -1.73
HPR1	YDR138W	YSW1	P38280	609 aa		4.23	□□□□□ -1.73
HPR1	YDR138W	MRX1	P40050	688 aa		4.23	□□□□□ -1.73
HPR1	YDR138W	BUR6	P40096	142 aa		4.23	□□□□□ -1.73
HPR1	YDR138W	CAK1	P43568	368 aa	Predicted RBP	4.23	□□□□□ -1.73
HPR1	YDR138W	IRC8	P47046	822 aa		4.23	□□□□□ -1.73
HPR1	YDR138W	PHO23	P50947	330 aa		4.23	□□□□□ -1.73
HPR1	YDR138W	VPS73	P53142	486 aa	Known RBP	4.23	□□□□□ -1.73
HPR1	YDR138W	YNR068C	P53754	272 aa		4.23	□□□□□ -1.73
HPR1	YDR138W	EFM6	P53970	246 aa		4.23	□□□□□ -1.73
HPR1	YDR138W	YDR109C	Q04585	715 aa		4.23	□□□□□ -1.73
HPR1	YDR138W	COQ9	Q05779	260 aa		4.23	□□□□□ -1.73
HPR1	YDR138W	HRD3	Q05787	833 aa		4.23	□□□□□ -1.73
HPR1	YDR138W	YLR040C	Q07988	224 aa		4.23	□□□□□ -1.73
HPR1	YDR138W	PDA1	P16387	420 aa	Known RBP	4.22	□□□□□ -1.73
HPR1	YDR138W	PUP3	P25451	205 aa	Known RBP	4.22	□□□□□ -1.73
HPR1	YDR138W	LTV1	P34078	463 aa		4.22	□□□□□ -1.73
HPR1	YDR138W	PXL1	P36166	706 aa		4.22	□□□□□ -1.73
HPR1	YDR138W	ARP1	P38696	384 aa		4.22	□□□□□ -1.73
HPR1	YDR138W	KEL1	P38853	1164 aa	Known RBP	4.22	□□□□□ -1.73
HPR1	YDR138W	MIT1	P40002	666 aa		4.22	□□□□□ -1.73
HPR1	YDR138W	HXT14	P42833	540 aa		4.22	□□□□□ -1.73
HPR1	YDR138W	IPI3	P53877	555 aa		4.22	□□□□□ -1.73
HPR1	YDR138W	BOP3	P53958	396 aa		4.22	□□□□□ -1.73
HPR1	YDR138W	YPL216W	Q08964	1102 aa		4.22	□□□□□ -1.73
HPR1	YDR138W	RPL3	P14126	387 aa	Known RBP	4.21	□□□□□ -1.73
HPR1	YDR138W	APN1	P22936	367 aa		4.21	□□□□□ -1.73
HPR1	YDR138W	ERG4	P25340	473 aa		4.21	□□□□□ -1.73
HPR1	YDR138W	PPS1	P38148	807 aa		4.21	□□□□□ -1.73
HPR1	YDR138W	YMR124W	P39523	943 aa	Known RBP	4.21	□□□□□ -1.73
HPR1	YDR138W	ECM10	P39987	644 aa		4.21	□□□□□ -1.73
HPR1	YDR138W	SMC3	P47037	1230 aa		4.21	□□□□□ -1.73
HPR1	YDR138W	OGG1	P53397	376 aa	Predicted RBP	4.21	□□□□□ -1.73
HPR1	YDR138W	NCS2	P53923	493 aa	Predicted RBP	4.21	□□□□□ -1.73
HPR1	YDR138W	BUD22	Q04347	519 aa	Known RBP	4.21	□□□□□ -1.73
HPR1	YDR138W	GGA1	Q06336	557 aa		4.21	□□□□□ -1.73
HPR1	YDR138W	RUD3	Q12234	484 aa	Known RBP	4.21	□□□□□ -1.73
HPR1	YDR138W	RRP36	Q12481	300 aa	Predicted RBP	4.21	□□□□□ -1.73
HPR1	YDR138W	CHO1	P08456	276 aa		4.21	□□□□□ -1.74
HPR1	YDR138W	LPD1	P09624	499 aa	Known RBP	4.21	□□□□□ -1.74
HPR1	YDR138W	RNR3	P21672	869 aa	Known RBP	4.21	□□□□□ -1.74
HPR1	YDR138W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
HPR1	YDR138W	GYP6	P32806	458 aa		4.21	□□□□□ -1.74
HPR1	YDR138W	THI80	P35202	319 aa		4.21	□□□□□ -1.74
HPR1	YDR138W	SNU114	P36048	1008 aa	Known RBP	4.21	□□□□□ -1.74
HPR1	YDR138W	SEC31	P38968	1273 aa	Known RBP	4.21	□□□□□ -1.74
HPR1	YDR138W	ELO1	P39540	310 aa		4.21	□□□□□ -1.74
HPR1	YDR138W	RPS10B	P46784	105 aa	Known RBP	4.21	□□□□□ -1.74
HPR1	YDR138W	FMP40	Q08968	688 aa	Predicted RBP	4.21	□□□□□ -1.74
HPR1	YDR138W	NTO1	Q12311	748 aa		4.21	□□□□□ -1.74
HPR1	YDR138W	CTF3	Q12748	733 aa		4.21	□□□□□ -1.74
HPR1	YDR138W	PMA1	P05030	918 aa	Known RBP	4.2	□□□□□ -1.74
HPR1	YDR138W	REC107	P21651	314 aa		4.2	□□□□□ -1.74
HPR1	YDR138W	IDH2	P28241	369 aa	Known RBP	4.2	□□□□□ -1.74
HPR1	YDR138W	LAC1	P28496	418 aa		4.2	□□□□□ -1.74
HPR1	YDR138W	PAP1	P29468	568 aa	Known RBP	4.2	□□□□□ -1.74
HPR1	YDR138W	UGP1	P32861	499 aa	Known RBP	4.2	□□□□□ -1.74
HPR1	YDR138W	YBR144C	P34215	104 aa		4.2	□□□□□ -1.74
HPR1	YDR138W	SEF1	P34228	1148 aa		4.2	□□□□□ -1.74
HPR1	YDR138W	SAP1	P39955	897 aa	Known RBP	4.2	□□□□□ -1.74
HPR1	YDR138W	STB2	P46679	850 aa		4.2	□□□□□ -1.74
HPR1	YDR138W	SEC5	P89102	971 aa		4.2	□□□□□ -1.74
HPR1	YDR138W	KAP120	Q02932	1032 aa		4.2	□□□□□ -1.74
HPR1	YDR138W	RPS10A	Q08745	105 aa	Predicted RBP	4.2	□□□□□ -1.74
HPR1	YDR138W	ALG7	P07286	448 aa		4.2	□□□□□ -1.74
HPR1	YDR138W	GEX1	P25596	615 aa		4.2	□□□□□ -1.74
HPR1	YDR138W	GSH1	P32477	678 aa		4.2	□□□□□ -1.74
HPR1	YDR138W	TFB1	P32776	642 aa		4.2	□□□□□ -1.74
HPR1	YDR138W	YME2	P32843	850 aa		4.2	□□□□□ -1.74
HPR1	YDR138W	ARC19	P33204	171 aa	Known RBP	4.2	□□□□□ -1.74
HPR1	YDR138W	FTH1	P38310	465 aa		4.2	□□□□□ -1.74
HPR1	YDR138W	OPT1	P40897	799 aa		4.2	□□□□□ -1.74
HPR1	YDR138W	MCM6	P53091	1017 aa	Known RBP	4.2	□□□□□ -1.74
HPR1	YDR138W	LEU9	Q12166	604 aa	Known RBP	4.2	□□□□□ -1.74
HPR1	YDR138W	TAF3	Q12297	353 aa		4.2	□□□□□ -1.74
HPR1	YDR138W	RRD2	Q12461	358 aa		4.2	□□□□□ -1.74
HPR1	YDR138W	SEC39	Q12745	709 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms