RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	JJJ1	P53863	590 aa		5.67	□□□□□ -1.5
RPN5	YDL147W	EFM6	P53970	246 aa		5.67	□□□□□ -1.5
RPN5	YDL147W	PFA5	Q03289	374 aa		5.67	□□□□□ -1.5
RPN5	YDL147W	SXM1	Q04175	944 aa	Known RBP	5.67	□□□□□ -1.5
RPN5	YDL147W	DPB4	Q04603	196 aa	Known RBP	5.67	□□□□□ -1.5
RPN5	YDL147W	RDL1	Q12305	139 aa	Known RBP	5.67	□□□□□ -1.5
RPN5	YDL147W	SNU66	Q12420	587 aa	Predicted RBP	5.67	□□□□□ -1.5
RPN5	YDL147W	ILS1	P09436	1072 aa	Known RBP	5.66	□□□□□ -1.5
RPN5	YDL147W	YCR006C	P25350	157 aa		5.66	□□□□□ -1.5
RPN5	YDL147W	GSY2	P27472	705 aa		5.66	□□□□□ -1.5
RPN5	YDL147W	ICS2	P38284	255 aa		5.66	□□□□□ -1.5
RPN5	YDL147W	FTH1	P38310	465 aa		5.66	□□□□□ -1.5
RPN5	YDL147W	ORC5	P50874	479 aa		5.66	□□□□□ -1.5
RPN5	YDL147W	IPI3	P53877	555 aa		5.66	□□□□□ -1.5
RPN5	YDL147W	BOP3	P53958	396 aa		5.66	□□□□□ -1.5
RPN5	YDL147W	ATG29	Q12092	213 aa		5.66	□□□□□ -1.5
RPN5	YDL147W	ATG9	Q12142	997 aa		5.66	□□□□□ -1.5
RPN5	YDL147W	RAP1	P11938	827 aa		5.65	□□□□□ -1.51
RPN5	YDL147W	REC107	P21651	314 aa		5.65	□□□□□ -1.51
RPN5	YDL147W	TCD2	P36101	447 aa	Known RBP	5.65	□□□□□ -1.51
RPN5	YDL147W	ELO1	P39540	310 aa		5.65	□□□□□ -1.51
RPN5	YDL147W	SSU1	P41930	458 aa		5.65	□□□□□ -1.51
RPN5	YDL147W	TWF1	P53250	332 aa		5.65	□□□□□ -1.51
RPN5	YDL147W	MAK32	P23060	363 aa		5.64	□□□□□ -1.51
RPN5	YDL147W	IMG1	P25626	169 aa		5.64	□□□□□ -1.51
RPN5	YDL147W	CMC1	P36064	111 aa		5.64	□□□□□ -1.51
RPN5	YDL147W	RFC1	P38630	861 aa	Known RBP	5.64	□□□□□ -1.51
RPN5	YDL147W	IMD2	P38697	523 aa	Known RBP	5.64	□□□□□ -1.51
RPN5	YDL147W	IMD3	P50095	523 aa	Known RBP	5.64	□□□□□ -1.51
RPN5	YDL147W	YGR250C	P53316	781 aa	Known RBP	5.64	□□□□□ -1.51
RPN5	YDL147W	YMR178W	Q03219	274 aa	Known RBP	5.64	□□□□□ -1.51
RPN5	YDL147W	APN1	P22936	367 aa		5.63	□□□□□ -1.51
RPN5	YDL147W	SAC1	P32368	623 aa	Known RBP	5.63	□□□□□ -1.51
RPN5	YDL147W	YJL068C	P40363	299 aa		5.63	□□□□□ -1.51
RPN5	YDL147W	PET130	P47065	347 aa		5.63	□□□□□ -1.51
RPN5	YDL147W	IMD4	P50094	524 aa	Known RBP	5.63	□□□□□ -1.51
RPN5	YDL147W	RMT2	Q03305	412 aa		5.63	□□□□□ -1.51
RPN5	YDL147W	RCF1	Q03713	159 aa		5.63	□□□□□ -1.51
RPN5	YDL147W	SNU56	Q03782	492 aa	Known RBP	5.63	□□□□□ -1.51
RPN5	YDL147W	FIN1	Q03898	291 aa		5.63	□□□□□ -1.51
RPN5	YDL147W	YLR455W	Q06188	304 aa		5.63	□□□□□ -1.51
RPN5	YDL147W	ART10	P18634	518 aa	Known RBP	5.62	□□□□□ -1.51
RPN5	YDL147W	KGD1	P20967	1014 aa	Known RBP	5.62	□□□□□ -1.51
RPN5	YDL147W	TKL1	P23254	680 aa	Known RBP	5.62	□□□□□ -1.51
RPN5	YDL147W	BOS1	P25385	244 aa		5.62	□□□□□ -1.51
RPN5	YDL147W	PUP3	P25451	205 aa	Known RBP	5.62	□□□□□ -1.51
RPN5	YDL147W	SYN8	P31377	255 aa		5.62	□□□□□ -1.51
RPN5	YDL147W	SWI3	P32591	825 aa		5.62	□□□□□ -1.51
RPN5	YDL147W	MRE11	P32829	692 aa		5.62	□□□□□ -1.51
RPN5	YDL147W	WBP1	P33767	430 aa	Known RBP	5.62	□□□□□ -1.51
RPN5	YDL147W	PMT1	P33775	817 aa		5.62	□□□□□ -1.51
RPN5	YDL147W	SAS3	P34218	831 aa		5.62	□□□□□ -1.51
RPN5	YDL147W	DBP8	P38719	431 aa		5.62	□□□□□ -1.51
RPN5	YDL147W	CIN1	P40987	1014 aa		5.62	□□□□□ -1.51
RPN5	YDL147W	EMI2	Q04409	500 aa	Known RBP	5.62	□□□□□ -1.51
RPN5	YDL147W	ECM22	Q05958	814 aa	Predicted RBP	5.62	□□□□□ -1.51
RPN5	YDL147W	MRD1	Q06106	887 aa	Known RBP	5.62	□□□□□ -1.51
RPN5	YDL147W	PDR8	Q06149	701 aa		5.62	□□□□□ -1.51
RPN5	YDL147W	TPO3	Q06451	622 aa		5.62	□□□□□ -1.51
RPN5	YDL147W	BSP1	Q06604	576 aa		5.62	□□□□□ -1.51
RPN5	YDL147W	TEN1	Q07921	160 aa		5.62	□□□□□ -1.51
RPN5	YDL147W	CDC45	Q08032	650 aa		5.62	□□□□□ -1.51
RPN5	YDL147W	ETT1	Q08421	412 aa	Known RBP	5.62	□□□□□ -1.51
RPN5	YDL147W	YOL159C-A	Q3E769	90 aa		5.62	□□□□□ -1.51
RPN5	YDL147W	SGS1	P35187	1447 aa		5.61	□□□□□ -1.51
RPN5	YDL147W	ADK2	P26364	225 aa		5.61	□□□□□ -1.51
RPN5	YDL147W	PAP1	P29468	568 aa	Known RBP	5.61	□□□□□ -1.51
RPN5	YDL147W	YME1	P32795	747 aa		5.61	□□□□□ -1.51
RPN5	YDL147W	TSC10	P38342	320 aa		5.61	□□□□□ -1.51
RPN5	YDL147W	QRI1	P43123	477 aa	Known RBP	5.61	□□□□□ -1.51
RPN5	YDL147W	ERG26	P53199	349 aa	Known RBP	5.61	□□□□□ -1.51
RPN5	YDL147W	OGG1	P53397	376 aa	Predicted RBP	5.61	□□□□□ -1.51
RPN5	YDL147W	ERO1	Q03103	563 aa		5.61	□□□□□ -1.51
RPN5	YDL147W	RQC1	Q05468	723 aa	Known RBP	5.61	□□□□□ -1.51
RPN5	YDL147W	ECM30	Q06673	1274 aa		5.61	□□□□□ -1.51
RPN5	YDL147W	MCH4	Q08268	501 aa		5.61	□□□□□ -1.51
RPN5	YDL147W	RLM1	Q12224	676 aa		5.61	□□□□□ -1.51
RPN5	YDL147W	SEC39	Q12745	709 aa		5.61	□□□□□ -1.51
RPN5	YDL147W	CHO1	P08456	276 aa		5.6	□□□□□ -1.51
RPN5	YDL147W	MRP13	P12686	339 aa		5.6	□□□□□ -1.51
RPN5	YDL147W	ADY2	P25613	283 aa		5.6	□□□□□ -1.51
RPN5	YDL147W	TIF3	P34167	436 aa	Known RBP	5.6	□□□□□ -1.51
RPN5	YDL147W	OCT1	P35999	772 aa		5.6	□□□□□ -1.51
RPN5	YDL147W	ERV46	P39727	415 aa		5.6	□□□□□ -1.51
RPN5	YDL147W	CDC1	P40986	491 aa		5.6	□□□□□ -1.51
RPN5	YDL147W	HXT14	P42833	540 aa		5.6	□□□□□ -1.51
RPN5	YDL147W	TAX4	P47030	604 aa		5.6	□□□□□ -1.51
RPN5	YDL147W	YDR131C	Q03899	556 aa		5.6	□□□□□ -1.51
RPN5	YDL147W	SUT2	Q12286	268 aa		5.6	□□□□□ -1.51
RPN5	YDL147W	YML133C	Q03099	1374 aa		5.59	□□□□□ -1.51
RPN5	YDL147W	YLL067C	Q07888	1374 aa		5.59	□□□□□ -1.51
RPN5	YDL147W	YLL066C	Q99208	1374 aa		5.59	□□□□□ -1.51
RPN5	YDL147W	ARG81	P05085	880 aa		5.59	□□□□□ -1.51
RPN5	YDL147W	KRS1	P15180	591 aa	Known RBP	5.59	□□□□□ -1.51
RPN5	YDL147W	CLC1	P17891	233 aa		5.59	□□□□□ -1.51
RPN5	YDL147W	ILV6	P25605	309 aa	Known RBP	5.59	□□□□□ -1.51
RPN5	YDL147W	PPZ2	P33329	710 aa		5.59	□□□□□ -1.51
RPN5	YDL147W	YBL055C	P34220	418 aa	Predicted RBP	5.59	□□□□□ -1.51
RPN5	YDL147W	ARN1	P38731	627 aa		5.59	□□□□□ -1.51
RPN5	YDL147W	UBP8	P50102	471 aa		5.59	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 40.4 ms