RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 INHBEP58166 350 aa15.13■□□□□ 0.01
PHGDH-221ENST00000641573 PRKG1Q13976 671 aa15.13■□□□□ 0.01
PHGDH-221ENST00000641573 CSPP1Q1MSJ5 1256 aa15.13■□□□□ 0.01
PHGDH-221ENST00000641573 USP17L2Q6R6M4 530 aa15.13■□□□□ 0.01
PHGDH-221ENST00000641573 MIGA2Q7L4E1 593 aa15.13■□□□□ 0.01
PHGDH-221ENST00000641573 RASGRP2Q7LDG7 609 aa15.13■□□□□ 0.01
PHGDH-221ENST00000641573 MKL1Q969V6 931 aa15.13■□□□□ 0.01
PHGDH-221ENST00000641573 TEPSINQ96N21 525 aa15.13■□□□□ 0.01
PHGDH-221ENST00000641573 RBM27Q9P2N5 1060 aaKnown RBP15.13■□□□□ 0.01
PHGDH-221ENST00000641573 HTTP42858 3142 aa15.13■□□□□ 0.01
PHGDH-221ENST00000641573 KIF28PB7ZC32 967 aa15.12■□□□□ 0.01
PHGDH-221ENST00000641573 KLRF2D3W0D1 207 aa15.12■□□□□ 0.01
PHGDH-221ENST00000641573 SNHG28P0DPA3 235 aa15.12■□□□□ 0.01
PHGDH-221ENST00000641573 PDHBP11177 359 aa15.12■□□□□ 0.01
PHGDH-221ENST00000641573 XBP1P17861 261 aa15.12■□□□□ 0.01
PHGDH-221ENST00000641573 EN2P19622 333 aaPredicted RBP15.12■□□□□ 0.01
PHGDH-221ENST00000641573 MAP3K10Q02779 954 aa15.12■□□□□ 0.01
PHGDH-221ENST00000641573 ICA1Q05084 483 aa15.12■□□□□ 0.01
PHGDH-221ENST00000641573 SLC35G1Q2M3R5 365 aa15.12■□□□□ 0.01
PHGDH-221ENST00000641573 ASPRV1Q53RT3 343 aa15.12■□□□□ 0.01
PHGDH-221ENST00000641573 SPRYD7Q5W111 196 aa15.12■□□□□ 0.01
PHGDH-221ENST00000641573 BRAPQ7Z569 592 aa15.12■□□□□ 0.01
PHGDH-221ENST00000641573 SIAH1Q8IUQ4 282 aa15.12■□□□□ 0.01
PHGDH-221ENST00000641573 ZNF396Q96N95 335 aaPredicted RBP15.12■□□□□ 0.01
PHGDH-221ENST00000641573 TFIP11Q9UBB9 837 aaKnown RBP15.12■□□□□ 0.01
PHGDH-221ENST00000641573 KCNJ14Q9UNX9 436 aa15.12■□□□□ 0.01
PHGDH-221ENST00000641573 PTPN22Q9Y2R2 807 aa15.12■□□□□ 0.01
PHGDH-221ENST00000641573 MMP1P03956 469 aa15.11■□□□□ 0.01
PHGDH-221ENST00000641573 SCG2P13521 617 aa15.11■□□□□ 0.01
PHGDH-221ENST00000641573 SMARCA1P28370 1054 aa15.11■□□□□ 0.01
PHGDH-221ENST00000641573 GNL2Q13823 731 aaKnown RBP15.11■□□□□ 0.01
PHGDH-221ENST00000641573 SAFBQ15424 915 aaKnown RBP eCLIP15.11■□□□□ 0.01
PHGDH-221ENST00000641573 PFKFB3Q16875 520 aaPredicted RBP15.11■□□□□ 0.01
PHGDH-221ENST00000641573 APOBEC3FQ8IUX4 373 aaKnown RBP15.11■□□□□ 0.01
PHGDH-221ENST00000641573 PIBF1Q8WXW3 757 aa15.11■□□□□ 0.01
PHGDH-221ENST00000641573 SPZ1Q9BXG8 430 aa15.11■□□□□ 0.01
PHGDH-221ENST00000641573 DEFB129Q9H1M3 183 aa15.11■□□□□ 0.01
PHGDH-221ENST00000641573 VPS54Q9P1Q0 977 aa15.11■□□□□ 0.01
PHGDH-221ENST00000641573 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.11■□□□□ 0.01
PHGDH-221ENST00000641573 FRMPD2Q68DX3 1309 aaPredicted RBP15.11■□□□□ 0.01
PHGDH-221ENST00000641573 CYTH3O43739 400 aa15.1■□□□□ 0.01
PHGDH-221ENST00000641573 ZNF543Q08ER8 600 aa15.1■□□□□ 0.01
PHGDH-221ENST00000641573 ATL3Q6DD88 541 aa15.1■□□□□ 0.01
PHGDH-221ENST00000641573 IFNL1Q8IU54 200 aa15.1■□□□□ 0.01
PHGDH-221ENST00000641573 ARMC5Q96C12 935 aa15.1■□□□□ 0.01
PHGDH-221ENST00000641573 SHISA4Q96DD7 197 aa15.1■□□□□ 0.01
PHGDH-221ENST00000641573 SLC10A4Q96EP9 437 aa15.1■□□□□ 0.01
PHGDH-221ENST00000641573 SCAND2PQ9GZW5 306 aaPredicted RBP15.1■□□□□ 0.01
PHGDH-221ENST00000641573 CPVLQ9H3G5 476 aa15.1■□□□□ 0.01
PHGDH-221ENST00000641573 EFCC1Q9HA90 598 aa15.1■□□□□ 0.01
PHGDH-221ENST00000641573 GPCPD1Q9NPB8 672 aa15.1■□□□□ 0.01
PHGDH-221ENST00000641573 CFAP45Q9UL16 551 aa15.1■□□□□ 0.01
PHGDH-221ENST00000641573 ZBTB21Q9ULJ3 1066 aa15.1■□□□□ 0.01
PHGDH-221ENST00000641573 DDX49Q9Y6V7 483 aaKnown RBP15.1■□□□□ 0.01
PHGDH-221ENST00000641573 KIAA0100Q14667 2235 aaKnown RBP15.1■□□□□ 0.01
PHGDH-221ENST00000641573 GADD45BO75293 160 aaPredicted RBP15.09■□□□□ 0.01
PHGDH-221ENST00000641573 CCDC96Q2M329 555 aa15.09■□□□□ 0.01
PHGDH-221ENST00000641573 SLFN13Q68D06 897 aa15.09■□□□□ 0.01
PHGDH-221ENST00000641573 DIS3L2Q8IYB7 885 aaKnown RBP15.09■□□□□ 0.01
PHGDH-221ENST00000641573 DCAF4Q8WV16 495 aa15.09■□□□□ 0.01
PHGDH-221ENST00000641573 LEO1Q8WVC0 666 aaPredicted RBP15.09■□□□□ 0.01
PHGDH-221ENST00000641573 SPATA32Q96LK8 384 aa15.09■□□□□ 0.01
PHGDH-221ENST00000641573 PHF20Q9BVI0 1012 aa15.09■□□□□ 0.01
PHGDH-221ENST00000641573 UBA5Q9GZZ9 404 aa15.09■□□□□ 0.01
PHGDH-221ENST00000641573 BTBD18B2RXH4 712 aa15.08■□□□□ 0
PHGDH-221ENST00000641573 DLL1O00548 723 aa15.08■□□□□ 0
PHGDH-221ENST00000641573 MBD3O95983 291 aa15.08■□□□□ 0
PHGDH-221ENST00000641573 ZBTB48P10074 688 aaPredicted RBP15.08■□□□□ 0
PHGDH-221ENST00000641573 U2AF2P26368 475 aaKnown RBP eCLIP15.08■□□□□ 0
PHGDH-221ENST00000641573 CAP2P40123 477 aa15.08■□□□□ 0
PHGDH-221ENST00000641573 KLHL40Q2TBA0 621 aa15.08■□□□□ 0
PHGDH-221ENST00000641573 GPATCH4Q5T3I0 446 aaKnown RBP15.08■□□□□ 0
PHGDH-221ENST00000641573 LDLRAD1Q5T700 205 aa15.08■□□□□ 0
PHGDH-221ENST00000641573 NBPF12Q5TAG4 269 aaPredicted RBP15.08■□□□□ 0
PHGDH-221ENST00000641573 MYSM1Q5VVJ2 828 aa15.08■□□□□ 0
PHGDH-221ENST00000641573 GMCL1P1Q8NEA9 526 aa15.08■□□□□ 0
PHGDH-221ENST00000641573 CD99L2Q8TCZ2 262 aa15.08■□□□□ 0
PHGDH-221ENST00000641573 GPT2Q8TD30 523 aa15.08■□□□□ 0
PHGDH-221ENST00000641573 RRP36Q96EU6 259 aaKnown RBP15.08■□□□□ 0
PHGDH-221ENST00000641573 USP28Q96RU2 1077 aa15.08■□□□□ 0
PHGDH-221ENST00000641573 FOXP1Q9H334 677 aaPredicted RBP15.08■□□□□ 0
PHGDH-221ENST00000641573 RIOX1Q9H6W3 641 aa15.08■□□□□ 0
PHGDH-221ENST00000641573 ARHGEF10LQ9HCE6 1279 aa15.08■□□□□ 0
PHGDH-221ENST00000641573 VAT1LQ9HCJ6 419 aa15.08■□□□□ 0
PHGDH-221ENST00000641573 SYNPO2Q9UMS6 1093 aa15.08■□□□□ 0
PHGDH-221ENST00000641573 ELP1O95163 1332 aa15.08■□□□□ 0
PHGDH-221ENST00000641573 CENPFP49454 3210 aa15.08■□□□□ 0
PHGDH-221ENST00000641573 PHF20L1A8MW92 1017 aa15.07■□□□□ 0
PHGDH-221ENST00000641573 F5H6K3 240 aa15.07■□□□□ 0
PHGDH-221ENST00000641573 RAD21O60216 631 aa15.07■□□□□ 0
PHGDH-221ENST00000641573 KRT2P35908 639 aa15.07■□□□□ 0
PHGDH-221ENST00000641573 CEBPZQ03701 1054 aaKnown RBP15.07■□□□□ 0
PHGDH-221ENST00000641573 KLRC3Q07444 240 aa15.07■□□□□ 0
PHGDH-221ENST00000641573 ARHGEF6Q15052 776 aa15.07■□□□□ 0
PHGDH-221ENST00000641573 TTBK2Q6IQ55 1244 aa15.07■□□□□ 0
PHGDH-221ENST00000641573 KCTD1Q719H9 257 aa15.07■□□□□ 0
PHGDH-221ENST00000641573 NOSTRINQ8IVI9 506 aa15.07■□□□□ 0
PHGDH-221ENST00000641573 OXER1Q8TDS5 423 aa15.07■□□□□ 0
PHGDH-221ENST00000641573 GPKOWQ92917 476 aaPredicted RBP eCLIP15.07■□□□□ 0
PHGDH-221ENST00000641573 PIGSQ96S52 555 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms