RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 ZMYND12Q9H0C1 365 aa19.36■□□□□ 0.69
PHGDH-211ENST00000641213 SUGT1Q9Y2Z0 365 aa19.36■□□□□ 0.69
PHGDH-211ENST00000641213 HMGB2P26583 209 aaKnown RBP19.36■□□□□ 0.69
PHGDH-211ENST00000641213 TBX2Q13207 712 aaPredicted RBP19.36■□□□□ 0.69
PHGDH-211ENST00000641213 SPATA1Q5VX52 437 aa19.36■□□□□ 0.69
PHGDH-211ENST00000641213 NLGN1Q8N2Q7 840 aa19.36■□□□□ 0.69
PHGDH-211ENST00000641213 CCDC112Q8NEF3 446 aa19.36■□□□□ 0.69
PHGDH-211ENST00000641213 MTRQ99707 1265 aa19.36■□□□□ 0.69
PHGDH-211ENST00000641213 BLZF1Q9H2G9 400 aa19.36■□□□□ 0.69
PHGDH-211ENST00000641213 SYNRGQ9UMZ2 1314 aa19.35■□□□□ 0.69
PHGDH-211ENST00000641213 MYH4Q9Y623 1939 aa19.35■□□□□ 0.69
PHGDH-211ENST00000641213 PLIN4Q96Q06 1357 aa19.35■□□□□ 0.69
PHGDH-211ENST00000641213 F8W031 263 aaPredicted RBP19.35■□□□□ 0.69
PHGDH-211ENST00000641213 NPR1P16066 1061 aa19.35■□□□□ 0.69
PHGDH-211ENST00000641213 SMARCA1P28370 1054 aa19.35■□□□□ 0.69
PHGDH-211ENST00000641213 PICALMQ13492 652 aa19.35■□□□□ 0.69
PHGDH-211ENST00000641213 KLHL10Q6JEL2 608 aa19.35■□□□□ 0.69
PHGDH-211ENST00000641213 COL23A1Q86Y22 540 aaPredicted RBP19.35■□□□□ 0.69
PHGDH-211ENST00000641213 SMYD4Q8IYR2 804 aaPredicted RBP19.35■□□□□ 0.69
PHGDH-211ENST00000641213 PPP1R13BQ96KQ4 1090 aa19.35■□□□□ 0.69
PHGDH-211ENST00000641213 ZC3H12CQ9C0D7 883 aaKnown RBP19.35■□□□□ 0.69
PHGDH-211ENST00000641213 GTPBP6O43824 516 aaPredicted RBP19.34■□□□□ 0.69
PHGDH-211ENST00000641213 CDC25AP30304 524 aa19.34■□□□□ 0.69
PHGDH-211ENST00000641213 NAPAP54920 295 aa19.34■□□□□ 0.69
PHGDH-211ENST00000641213 GABPAQ06546 454 aa19.34■□□□□ 0.69
PHGDH-211ENST00000641213 GOLGA8FQ08AF8 430 aa19.34■□□□□ 0.69
PHGDH-211ENST00000641213 GOLGA8DPQ0D2H9 430 aa19.34■□□□□ 0.69
PHGDH-211ENST00000641213 TMEM60Q9H2L4 133 aa19.34■□□□□ 0.69
PHGDH-211ENST00000641213 TXLNAP40222 546 aa19.34■□□□□ 0.69
PHGDH-211ENST00000641213 STX17P56962 302 aa19.34■□□□□ 0.69
PHGDH-211ENST00000641213 NR1I3Q14994 352 aa19.34■□□□□ 0.69
PHGDH-211ENST00000641213 DTHD1Q6ZMT9 781 aa19.34■□□□□ 0.69
PHGDH-211ENST00000641213 MTERF4Q7Z6M4 381 aaKnown RBP19.34■□□□□ 0.69
PHGDH-211ENST00000641213 CCDC12Q8WUD4 166 aaPredicted RBP19.34■□□□□ 0.69
PHGDH-211ENST00000641213 RRP36Q96EU6 259 aaKnown RBP19.34■□□□□ 0.69
PHGDH-211ENST00000641213 USP17L5A8MUK1 530 aa19.33■□□□□ 0.69
PHGDH-211ENST00000641213 KIF2AO00139 706 aaPredicted RBP19.33■□□□□ 0.69
PHGDH-211ENST00000641213 SPECC1LQ69YQ0 1117 aa19.33■□□□□ 0.69
PHGDH-211ENST00000641213 HOMER1Q86YM7 354 aa19.33■□□□□ 0.69
PHGDH-211ENST00000641213 AKT1S1Q96B36 256 aa19.33■□□□□ 0.69
PHGDH-211ENST00000641213 DDX4Q9NQI0 724 aaKnown RBP19.33■□□□□ 0.69
PHGDH-211ENST00000641213 TTF2Q9UNY4 1162 aaKnown RBP19.33■□□□□ 0.69
PHGDH-211ENST00000641213 A0A1B0GTH6 734 aa19.32■□□□□ 0.68
PHGDH-211ENST00000641213 KARSQ15046 597 aaKnown RBP19.32■□□□□ 0.68
PHGDH-211ENST00000641213 DOK7Q18PE1 504 aa19.32■□□□□ 0.68
PHGDH-211ENST00000641213 CDKAL1Q5VV42 579 aa19.32■□□□□ 0.68
PHGDH-211ENST00000641213 APTXQ7Z2E3 356 aaKnown RBP19.32■□□□□ 0.68
PHGDH-211ENST00000641213 MXD3Q9BW11 206 aa19.32■□□□□ 0.68
PHGDH-211ENST00000641213 MTMR4Q9NYA4 1195 aa19.32■□□□□ 0.68
PHGDH-211ENST00000641213 GREB1LQ9C091 1923 aaPredicted RBP19.32■□□□□ 0.68
PHGDH-211ENST00000641213 SMCO2A6NFE2 343 aa19.32■□□□□ 0.68
PHGDH-211ENST00000641213 LAD1O00515 517 aa19.32■□□□□ 0.68
PHGDH-211ENST00000641213 ALDH1B1P30837 517 aa19.32■□□□□ 0.68
PHGDH-211ENST00000641213 STAT6P42226 847 aa19.32■□□□□ 0.68
PHGDH-211ENST00000641213 DPP8Q6V1X1 898 aaPredicted RBP19.32■□□□□ 0.68
PHGDH-211ENST00000641213 KRT25Q7Z3Z0 450 aa19.32■□□□□ 0.68
PHGDH-211ENST00000641213 TMEM139Q8IV31 216 aa19.32■□□□□ 0.68
PHGDH-211ENST00000641213 PIGSQ96S52 555 aa19.32■□□□□ 0.68
PHGDH-211ENST00000641213 VAT1LQ9HCJ6 419 aa19.32■□□□□ 0.68
PHGDH-211ENST00000641213 C6orf50Q9HD87 102 aa19.32■□□□□ 0.68
PHGDH-211ENST00000641213 DISC1Q9NRI5 854 aa19.32■□□□□ 0.68
PHGDH-211ENST00000641213 SEC63Q9UGP8 760 aaKnown RBP19.32■□□□□ 0.68
PHGDH-211ENST00000641213 PDHBP11177 359 aa19.31■□□□□ 0.68
PHGDH-211ENST00000641213 RIOX1Q9H6W3 641 aa19.31■□□□□ 0.68
PHGDH-211ENST00000641213 PP2D1A8MPX8 630 aa19.31■□□□□ 0.68
PHGDH-211ENST00000641213 AKR1B1P15121 316 aa19.31■□□□□ 0.68
PHGDH-211ENST00000641213 GNA11P29992 359 aa19.31■□□□□ 0.68
PHGDH-211ENST00000641213 PDE6BP35913 854 aa19.31■□□□□ 0.68
PHGDH-211ENST00000641213 PRPHP41219 470 aa19.31■□□□□ 0.68
PHGDH-211ENST00000641213 RRAGBQ5VZM2 374 aa19.31■□□□□ 0.68
PHGDH-211ENST00000641213 KIF18AQ8NI77 898 aa19.31■□□□□ 0.68
PHGDH-211ENST00000641213 UBA5Q9GZZ9 404 aa19.31■□□□□ 0.68
PHGDH-211ENST00000641213 USP40Q9NVE5 1235 aa19.31■□□□□ 0.68
PHGDH-211ENST00000641213 CTNND2Q9UQB3 1225 aa19.31■□□□□ 0.68
PHGDH-211ENST00000641213 IGKV6D-41A0A0C4DH26 115 aa19.3■□□□□ 0.68
PHGDH-211ENST00000641213 SCNN1DP51172 638 aa19.3■□□□□ 0.68
PHGDH-211ENST00000641213 NONOQ15233 471 aaKnown RBP eCLIP19.3■□□□□ 0.68
PHGDH-211ENST00000641213 NAALADL2Q58DX5 795 aa19.3■□□□□ 0.68
PHGDH-211ENST00000641213 TC2NQ8N9U0 490 aa19.3■□□□□ 0.68
PHGDH-211ENST00000641213 PLSCR1O15162 318 aa19.29■□□□□ 0.68
PHGDH-211ENST00000641213 CCP110O43303 1012 aa19.29■□□□□ 0.68
PHGDH-211ENST00000641213 RPN1P04843 607 aaKnown RBP19.29■□□□□ 0.68
PHGDH-211ENST00000641213 ZNF658Q5TYW1 1059 aaPredicted RBP19.29■□□□□ 0.68
PHGDH-211ENST00000641213 CCSER1Q9C0I3 900 aa19.29■□□□□ 0.68
PHGDH-211ENST00000641213 RMND1Q9NWS8 449 aa19.29■□□□□ 0.68
PHGDH-211ENST00000641213 FRMPD2Q68DX3 1309 aaPredicted RBP19.29■□□□□ 0.68
PHGDH-211ENST00000641213 ZNF646O15015 1829 aaPredicted RBP19.29■□□□□ 0.68
PHGDH-211ENST00000641213 TEX33O43247 280 aa19.29■□□□□ 0.68
PHGDH-211ENST00000641213 SOGA3Q5TF21 947 aa19.29■□□□□ 0.68
PHGDH-211ENST00000641213 FCHSD1Q86WN1 690 aa19.29■□□□□ 0.68
PHGDH-211ENST00000641213 LRRC47Q8N1G4 583 aaKnown RBP19.29■□□□□ 0.68
PHGDH-211ENST00000641213 ANKRD7Q92527 254 aa19.29■□□□□ 0.68
PHGDH-211ENST00000641213 MASTLQ96GX5 879 aa19.29■□□□□ 0.68
PHGDH-211ENST00000641213 ADD3Q9UEY8 706 aaKnown RBP19.29■□□□□ 0.68
PHGDH-211ENST00000641213 SIPA1L1O43166 1804 aa19.28■□□□□ 0.68
PHGDH-211ENST00000641213 ESYT2A0FGR8 921 aa19.28■□□□□ 0.68
PHGDH-211ENST00000641213 ARHGAP6O43182 974 aa19.28■□□□□ 0.68
PHGDH-211ENST00000641213 MMP10P09238 476 aa19.28■□□□□ 0.68
PHGDH-211ENST00000641213 UBA7P41226 1012 aa19.28■□□□□ 0.68
PHGDH-211ENST00000641213 ADKP55263 362 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms