RNA–Protein interactions for RNA: ENST00000638853.1

PAX6-241, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,248 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-241ENST00000638853 C16orf59Q7L2K0 433 aa13.96□□□□□ -0.17
PAX6-241ENST00000638853 SPICE1Q8N0Z3 855 aa13.96□□□□□ -0.17
PAX6-241ENST00000638853 MB21D1Q8N884 522 aa13.96□□□□□ -0.17
PAX6-241ENST00000638853 STRBPQ96SI9 672 aaKnown RBP13.96□□□□□ -0.17
PAX6-241ENST00000638853 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.96□□□□□ -0.17
PAX6-241ENST00000638853 C1QTNF1Q9BXJ1 281 aa13.96□□□□□ -0.17
PAX6-241ENST00000638853 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.96□□□□□ -0.17
PAX6-241ENST00000638853 STARD7Q9NQZ5 370 aa13.96□□□□□ -0.17
PAX6-241ENST00000638853 ECHDC1Q9NTX5 307 aa13.96□□□□□ -0.17
PAX6-241ENST00000638853 TMX2Q9Y320 296 aa13.96□□□□□ -0.17
PAX6-241ENST00000638853 PCDHB15Q9Y5E8 787 aa13.96□□□□□ -0.17
PAX6-241ENST00000638853 SLC4A4Q9Y6R1 1079 aa13.96□□□□□ -0.17
PAX6-241ENST00000638853 ROBO3Q96MS0 1386 aa13.96□□□□□ -0.18
PAX6-241ENST00000638853 XIRP2A4UGR9 3374 aa13.95□□□□□ -0.18
PAX6-241ENST00000638853 TCF20Q9UGU0 1960 aaKnown RBP13.95□□□□□ -0.18
PAX6-241ENST00000638853 GSG1L2A8MUP6 293 aa13.95□□□□□ -0.18
PAX6-241ENST00000638853 ADAMTS4O75173 837 aa13.95□□□□□ -0.18
PAX6-241ENST00000638853 PGK2P07205 417 aa13.95□□□□□ -0.18
PAX6-241ENST00000638853 DSG3P32926 999 aa13.95□□□□□ -0.18
PAX6-241ENST00000638853 PPIGQ13427 754 aaKnown RBP eCLIP13.95□□□□□ -0.18
PAX6-241ENST00000638853 TMEM240Q5SV17 173 aa13.95□□□□□ -0.18
PAX6-241ENST00000638853 RASIP1Q5U651 963 aa13.95□□□□□ -0.18
PAX6-241ENST00000638853 OSBP2Q969R2 916 aa13.95□□□□□ -0.18
PAX6-241ENST00000638853 ATG4CQ96DT6 458 aa13.95□□□□□ -0.18
PAX6-241ENST00000638853 NECAB3Q96P71 396 aaPredicted RBP13.95□□□□□ -0.18
PAX6-241ENST00000638853 TINF2Q9BSI4 451 aa13.95□□□□□ -0.18
PAX6-241ENST00000638853 TBX21Q9UL17 535 aa13.95□□□□□ -0.18
PAX6-241ENST00000638853 NCOR1O75376 2440 aa13.95□□□□□ -0.18
PAX6-241ENST00000638853 NAV1Q8NEY1 1877 aa13.95□□□□□ -0.18
PAX6-241ENST00000638853 REV3LO60673 3130 aa13.95□□□□□ -0.18
PAX6-241ENST00000638853 COL11A1P12107 1806 aaPredicted RBP13.94□□□□□ -0.18
PAX6-241ENST00000638853 PARP14Q460N5 1801 aa13.94□□□□□ -0.18
PAX6-241ENST00000638853 BAZ2AQ9UIF9 1905 aaKnown RBP13.94□□□□□ -0.18
PAX6-241ENST00000638853 FLOT1O75955 427 aa13.94□□□□□ -0.18
PAX6-241ENST00000638853 ZNF865P0CJ78 1059 aaPredicted RBP13.94□□□□□ -0.18
PAX6-241ENST00000638853 EEF2P13639 858 aaKnown RBP13.94□□□□□ -0.18
PAX6-241ENST00000638853 CSF2RAP15509 400 aa13.94□□□□□ -0.18
PAX6-241ENST00000638853 ACLYP53396 1101 aa13.94□□□□□ -0.18
PAX6-241ENST00000638853 ICA1Q05084 483 aa13.94□□□□□ -0.18
PAX6-241ENST00000638853 CCDC174Q6PII3 467 aa13.94□□□□□ -0.18
PAX6-241ENST00000638853 SAMD1Q6SPF0 538 aaPredicted RBP13.94□□□□□ -0.18
PAX6-241ENST00000638853 OTUD7AQ8TE49 926 aaPredicted RBP13.94□□□□□ -0.18
PAX6-241ENST00000638853 NUP133Q8WUM0 1156 aa13.94□□□□□ -0.18
PAX6-241ENST00000638853 GBF1Q92538 1859 aa13.94□□□□□ -0.18
PAX6-241ENST00000638853 CCDC17Q96LX7 622 aa13.94□□□□□ -0.18
PAX6-241ENST00000638853 TSEN34Q9BSV6 310 aaKnown RBP13.94□□□□□ -0.18
PAX6-241ENST00000638853 ACRP10323 421 aa13.93□□□□□ -0.18
PAX6-241ENST00000638853 AKR1A1P14550 325 aa13.93□□□□□ -0.18
PAX6-241ENST00000638853 ZNF365Q70YC5 407 aa13.93□□□□□ -0.18
PAX6-241ENST00000638853 KBTBD3Q8NAB2 608 aa13.93□□□□□ -0.18
PAX6-241ENST00000638853 MMP19Q99542 508 aa13.93□□□□□ -0.18
PAX6-241ENST00000638853 VCPKMTQ9H867 229 aa13.93□□□□□ -0.18
PAX6-241ENST00000638853 FBXO28Q9NVF7 368 aa13.93□□□□□ -0.18
PAX6-241ENST00000638853 MSRAQ9UJ68 235 aa13.93□□□□□ -0.18
PAX6-241ENST00000638853 MYO9BQ13459 2157 aa13.93□□□□□ -0.18
PAX6-241ENST00000638853 SYNRGQ9UMZ2 1314 aa13.92□□□□□ -0.18
PAX6-241ENST00000638853 RNF113AO15541 343 aaKnown RBP13.92□□□□□ -0.18
PAX6-241ENST00000638853 SLC25A27O95847 323 aa13.92□□□□□ -0.18
PAX6-241ENST00000638853 KCTD2Q14681 263 aa13.92□□□□□ -0.18
PAX6-241ENST00000638853 TMEM132BQ14DG7 1078 aa13.92□□□□□ -0.18
PAX6-241ENST00000638853 KCNA10Q16322 511 aa13.92□□□□□ -0.18
PAX6-241ENST00000638853 ZNF792Q3KQV3 632 aa13.92□□□□□ -0.18
PAX6-241ENST00000638853 SBK1Q52WX2 424 aa13.92□□□□□ -0.18
PAX6-241ENST00000638853 ZSCAN25Q6NSZ9 544 aa13.92□□□□□ -0.18
PAX6-241ENST00000638853 PSRC1Q6PGN9 363 aaPredicted RBP13.92□□□□□ -0.18
PAX6-241ENST00000638853 STK11IPQ8N1F8 1099 aa13.92□□□□□ -0.18
PAX6-241ENST00000638853 TMEM199Q8N511 208 aa13.92□□□□□ -0.18
PAX6-241ENST00000638853 TSPYL2Q9H2G4 693 aaPredicted RBP13.92□□□□□ -0.18
PAX6-241ENST00000638853 NKX2-4Q9H2Z4 354 aa13.92□□□□□ -0.18
PAX6-241ENST00000638853 ARHGEF10LQ9HCE6 1279 aa13.92□□□□□ -0.18
PAX6-241ENST00000638853 CXXC1Q9P0U4 656 aaPredicted RBP13.92□□□□□ -0.18
PAX6-241ENST00000638853 ADAMTS5Q9UNA0 930 aa13.92□□□□□ -0.18
PAX6-241ENST00000638853 CNPY2Q9Y2B0 182 aa13.92□□□□□ -0.18
PAX6-241ENST00000638853 MROH7Q68CQ1 1323 aa13.91□□□□□ -0.18
PAX6-241ENST00000638853 CHD7Q9P2D1 2997 aa13.91□□□□□ -0.18
PAX6-241ENST00000638853 MOXD2PA6NHM9 499 aa13.91□□□□□ -0.18
PAX6-241ENST00000638853 M0R2C6 588 aa13.91□□□□□ -0.18
PAX6-241ENST00000638853 BMP1P13497 986 aa13.91□□□□□ -0.18
PAX6-241ENST00000638853 RASA1P20936 1047 aa13.91□□□□□ -0.18
PAX6-241ENST00000638853 TFF2Q03403 129 aa13.91□□□□□ -0.18
PAX6-241ENST00000638853 RAB30Q15771 203 aa13.91□□□□□ -0.18
PAX6-241ENST00000638853 CCSAPQ6IQ19 270 aaPredicted RBP13.91□□□□□ -0.18
PAX6-241ENST00000638853 KLHDC9Q8NEP7 349 aa13.91□□□□□ -0.18
PAX6-241ENST00000638853 PPP1R12CQ9BZL4 782 aa13.91□□□□□ -0.18
PAX6-241ENST00000638853 KANSL2Q9H9L4 492 aa13.91□□□□□ -0.18
PAX6-241ENST00000638853 SLC28A3Q9HAS3 691 aa13.91□□□□□ -0.18
PAX6-241ENST00000638853 EPB41L4AQ9HCS5 686 aaPredicted RBP13.91□□□□□ -0.18
PAX6-241ENST00000638853 DIS3Q9Y2L1 958 aaKnown RBP13.91□□□□□ -0.18
PAX6-241ENST00000638853 SYNGAP1Q96PV0 1343 aa13.9□□□□□ -0.18
PAX6-241ENST00000638853 MYADML2A6NDP7 307 aa13.9□□□□□ -0.18
PAX6-241ENST00000638853 WDR46O15213 610 aaKnown RBP13.9□□□□□ -0.18
PAX6-241ENST00000638853 CDK7P50613 346 aa13.9□□□□□ -0.18
PAX6-241ENST00000638853 RIOX2Q8IUF8 465 aa13.9□□□□□ -0.18
PAX6-241ENST00000638853 MICALL1Q8N3F8 863 aa13.9□□□□□ -0.18
PAX6-241ENST00000638853 PI4K2BQ8TCG2 481 aa13.9□□□□□ -0.18
PAX6-241ENST00000638853 APPBP2Q92624 585 aa13.9□□□□□ -0.18
PAX6-241ENST00000638853 GLT1D1Q96MS3 346 aa13.9□□□□□ -0.18
PAX6-241ENST00000638853 SEC62Q99442 399 aaKnown RBP13.9□□□□□ -0.18
PAX6-241ENST00000638853 YBX2Q9Y2T7 364 aaKnown RBP13.9□□□□□ -0.18
PAX6-241ENST00000638853 HCN4Q9Y3Q4 1203 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms