RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 SHC4Q6S5L8 630 aa11.35□□□□□ -0.59
ATM-226ENST00000638443 HEATR3Q7Z4Q2 680 aa11.35□□□□□ -0.59
ATM-226ENST00000638443 MRPS27Q92552 414 aaKnown RBP11.35□□□□□ -0.59
ATM-226ENST00000638443 SGSM3Q96HU1 749 aa11.35□□□□□ -0.59
ATM-226ENST00000638443 GPCPD1Q9NPB8 672 aa11.35□□□□□ -0.59
ATM-226ENST00000638443 DDX19AQ9NUU7 478 aaKnown RBP11.35□□□□□ -0.59
ATM-226ENST00000638443 ZNF70Q9UC06 446 aaPredicted RBP11.35□□□□□ -0.59
ATM-226ENST00000638443 MYO3BQ8WXR4 1341 aa11.35□□□□□ -0.59
ATM-226ENST00000638443 CNTNAP1P78357 1384 aa11.35□□□□□ -0.59
ATM-226ENST00000638443 TTLL1O95922 423 aa11.35□□□□□ -0.59
ATM-226ENST00000638443 XBP1P17861 261 aa11.35□□□□□ -0.59
ATM-226ENST00000638443 SEPT2Q15019 361 aa11.35□□□□□ -0.59
ATM-226ENST00000638443 DLGAP5Q15398 846 aa11.35□□□□□ -0.59
ATM-226ENST00000638443 MAP3K11Q16584 847 aa11.35□□□□□ -0.59
ATM-226ENST00000638443 SOGA3Q5TF21 947 aa11.35□□□□□ -0.59
ATM-226ENST00000638443 TTBK2Q6IQ55 1244 aa11.35□□□□□ -0.59
ATM-226ENST00000638443 CCDC73Q6ZRK6 1079 aa11.35□□□□□ -0.59
ATM-226ENST00000638443 KCTD1Q719H9 257 aa11.35□□□□□ -0.59
ATM-226ENST00000638443 PIGSQ96S52 555 aa11.35□□□□□ -0.59
ATM-226ENST00000638443 TMEM39BQ9GZU3 492 aa11.35□□□□□ -0.59
ATM-226ENST00000638443 PI4KBQ9UBF8 816 aa11.35□□□□□ -0.59
ATM-226ENST00000638443 STK24Q9Y6E0 443 aa11.35□□□□□ -0.59
ATM-226ENST00000638443 ATRNL1Q5VV63 1379 aa11.34□□□□□ -0.59
ATM-226ENST00000638443 PFKFB1P16118 471 aa11.34□□□□□ -0.59
ATM-226ENST00000638443 NT5C2P49902 561 aa11.34□□□□□ -0.59
ATM-226ENST00000638443 FAM160A1Q05DH4 1040 aa11.34□□□□□ -0.59
ATM-226ENST00000638443 CERKLQ49MI3 558 aaPredicted RBP11.34□□□□□ -0.59
ATM-226ENST00000638443 PIK3AP1Q6ZUJ8 805 aa11.34□□□□□ -0.59
ATM-226ENST00000638443 FMR1NBQ8N0W7 255 aaPredicted RBP11.34□□□□□ -0.59
ATM-226ENST00000638443 OGFOD1Q8N543 542 aa11.34□□□□□ -0.59
ATM-226ENST00000638443 MICAL1Q8TDZ2 1067 aa11.34□□□□□ -0.59
ATM-226ENST00000638443 SREK1Q8WXA9 508 aaKnown RBP11.34□□□□□ -0.59
ATM-226ENST00000638443 DHX36Q9H2U1 1008 aaKnown RBP11.34□□□□□ -0.59
ATM-226ENST00000638443 ASTN2O75129 1339 aaPredicted RBP11.34□□□□□ -0.59
ATM-226ENST00000638443 STXBP3O00186 592 aa11.33□□□□□ -0.6
ATM-226ENST00000638443 EEF2P13639 858 aaKnown RBP11.33□□□□□ -0.6
ATM-226ENST00000638443 SLC16A2P36021 539 aa11.33□□□□□ -0.6
ATM-226ENST00000638443 SPDYE2Q495Y8 402 aa11.33□□□□□ -0.6
ATM-226ENST00000638443 CIAPIN1Q6FI81 312 aa11.33□□□□□ -0.6
ATM-226ENST00000638443 JDP2Q8WYK2 163 aa11.33□□□□□ -0.6
ATM-226ENST00000638443 TRIM34Q9BYJ4 488 aa11.33□□□□□ -0.6
ATM-226ENST00000638443 MYH4Q9Y623 1939 aa11.33□□□□□ -0.6
ATM-226ENST00000638443 A0A1W2PQ27 194 aa11.33□□□□□ -0.6
ATM-226ENST00000638443 A0A1W2PQ64 194 aa11.33□□□□□ -0.6
ATM-226ENST00000638443 A0A1W2PQD8 194 aa11.33□□□□□ -0.6
ATM-226ENST00000638443 WNT10BO00744 389 aa11.33□□□□□ -0.6
ATM-226ENST00000638443 ENTPD3O75355 529 aa11.33□□□□□ -0.6
ATM-226ENST00000638443 SNHG28P0DPA3 235 aa11.33□□□□□ -0.6
ATM-226ENST00000638443 TYRO3Q06418 890 aa11.33□□□□□ -0.6
ATM-226ENST00000638443 SKIV2LQ15477 1246 aaKnown RBP11.33□□□□□ -0.6
ATM-226ENST00000638443 RILPL1Q5EBL4 403 aa11.33□□□□□ -0.6
ATM-226ENST00000638443 TATDN1Q6P1N9 297 aa11.33□□□□□ -0.6
ATM-226ENST00000638443 RBM43Q6ZSC3 357 aaKnown RBP11.33□□□□□ -0.6
ATM-226ENST00000638443 SIAH1Q8IUQ4 282 aa11.33□□□□□ -0.6
ATM-226ENST00000638443 GPIHBP1Q8IV16 184 aa11.33□□□□□ -0.6
ATM-226ENST00000638443 SPZ1Q9BXG8 430 aa11.33□□□□□ -0.6
ATM-226ENST00000638443 HDAC9Q9UKV0 1011 aa11.33□□□□□ -0.6
ATM-226ENST00000638443 SSUH2Q9Y2M2 353 aa11.33□□□□□ -0.6
ATM-226ENST00000638443 CD2APQ9Y5K6 639 aa11.33□□□□□ -0.6
ATM-226ENST00000638443 KINO60870 393 aaKnown RBP11.32□□□□□ -0.6
ATM-226ENST00000638443 PPP6R2O75170 966 aa11.32□□□□□ -0.6
ATM-226ENST00000638443 GH2P01242 217 aa11.32□□□□□ -0.6
ATM-226ENST00000638443 GNAQP50148 359 aa11.32□□□□□ -0.6
ATM-226ENST00000638443 ZNF174Q15697 407 aa11.32□□□□□ -0.6
ATM-226ENST00000638443 CCDC96Q2M329 555 aa11.32□□□□□ -0.6
ATM-226ENST00000638443 SMYD5Q6GMV2 418 aa11.32□□□□□ -0.6
ATM-226ENST00000638443 MIGA2Q7L4E1 593 aa11.32□□□□□ -0.6
ATM-226ENST00000638443 NUP88Q99567 741 aaPredicted RBP11.32□□□□□ -0.6
ATM-226ENST00000638443 BARHL2Q9NY43 387 aa11.32□□□□□ -0.6
ATM-226ENST00000638443 FBXO2Q9UK22 296 aaPredicted RBP11.32□□□□□ -0.6
ATM-226ENST00000638443 ZNF541Q9H0D2 1346 aa11.32□□□□□ -0.6
ATM-226ENST00000638443 TAL1P17542 331 aaPredicted RBP11.32□□□□□ -0.6
ATM-226ENST00000638443 ICA1Q05084 483 aa11.32□□□□□ -0.6
ATM-226ENST00000638443 ZNF543Q08ER8 600 aa11.32□□□□□ -0.6
ATM-226ENST00000638443 USP49Q70CQ1 688 aa11.32□□□□□ -0.6
ATM-226ENST00000638443 SAMD7Q7Z3H4 446 aa11.32□□□□□ -0.6
ATM-226ENST00000638443 CCDC84Q86UT8 332 aaPredicted RBP11.32□□□□□ -0.6
ATM-226ENST00000638443 BLIDQ8IZY5 108 aa11.32□□□□□ -0.6
ATM-226ENST00000638443 AGBL3Q8NEM8 1001 aa11.32□□□□□ -0.6
ATM-226ENST00000638443 BRMS1Q9HCU9 246 aa11.32□□□□□ -0.6
ATM-226ENST00000638443 MYOZ2Q9NPC6 264 aa11.32□□□□□ -0.6
ATM-226ENST00000638443 TMOD2Q9NZR1 351 aa11.32□□□□□ -0.6
ATM-226ENST00000638443 GJA3Q9Y6H8 435 aa11.32□□□□□ -0.6
ATM-226ENST00000638443 M0R2N6 131 aa11.31□□□□□ -0.6
ATM-226ENST00000638443 PPP1R11O60927 126 aaPredicted RBP11.31□□□□□ -0.6
ATM-226ENST00000638443 LETM1O95202 739 aaPredicted RBP11.31□□□□□ -0.6
ATM-226ENST00000638443 NAPAP54920 295 aa11.31□□□□□ -0.6
ATM-226ENST00000638443 ABCB5Q2M3G0 1257 aa11.31□□□□□ -0.6
ATM-226ENST00000638443 ANO6Q4KMQ2 910 aa11.31□□□□□ -0.6
ATM-226ENST00000638443 COA7Q96BR5 231 aa11.31□□□□□ -0.6
ATM-226ENST00000638443 RNF39Q9H2S5 420 aa11.31□□□□□ -0.6
ATM-226ENST00000638443 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.31□□□□□ -0.6
ATM-226ENST00000638443 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.31□□□□□ -0.6
ATM-226ENST00000638443 PCDHA4Q9UN74 947 aa11.31□□□□□ -0.6
ATM-226ENST00000638443 A0A1W2PRG0 241 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 ZNF202O95125 648 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 CCDC192P0DO97 292 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 CMA1P23946 247 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 MCM7P33993 719 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 ECE1P42892 770 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms