RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 KRT86O43790 486 aa13.38□□□□□ -0.27
CAPN3-221ENST00000638141 ALADP13716 330 aa13.38□□□□□ -0.27
CAPN3-221ENST00000638141 KRT83P78385 493 aa13.38□□□□□ -0.27
CAPN3-221ENST00000638141 SPAG1Q07617 926 aa13.38□□□□□ -0.27
CAPN3-221ENST00000638141 TNNI3KQ59H18 835 aa13.38□□□□□ -0.27
CAPN3-221ENST00000638141 CFAP58Q5T655 872 aa13.38□□□□□ -0.27
CAPN3-221ENST00000638141 RPUSD2Q8IZ73 545 aaKnown RBP13.38□□□□□ -0.27
CAPN3-221ENST00000638141 KIRREL3Q8IZU9 778 aa13.38□□□□□ -0.27
CAPN3-221ENST00000638141 CCT6BQ92526 530 aa13.38□□□□□ -0.27
CAPN3-221ENST00000638141 KAZALD1Q96I82 304 aa13.38□□□□□ -0.27
CAPN3-221ENST00000638141 LIMA1Q9UHB6 759 aaKnown RBP13.38□□□□□ -0.27
CAPN3-221ENST00000638141 FPGT-TNNI3KV9GXZ4 949 aa13.38□□□□□ -0.27
CAPN3-221ENST00000638141 SYNRGQ9UMZ2 1314 aa13.37□□□□□ -0.27
CAPN3-221ENST00000638141 CFAP73A6NFT4 308 aa13.37□□□□□ -0.27
CAPN3-221ENST00000638141 E7EVH7 732 aa13.37□□□□□ -0.27
CAPN3-221ENST00000638141 SH2B2O14492 632 aaPredicted RBP13.37□□□□□ -0.27
CAPN3-221ENST00000638141 ENC1O14682 589 aa13.37□□□□□ -0.27
CAPN3-221ENST00000638141 TRAPPC3O43617 180 aa13.37□□□□□ -0.27
CAPN3-221ENST00000638141 DDX58O95786 925 aaKnown RBP13.37□□□□□ -0.27
CAPN3-221ENST00000638141 PEX19P40855 299 aa13.37□□□□□ -0.27
CAPN3-221ENST00000638141 PIP4K2AP48426 406 aaPredicted RBP13.37□□□□□ -0.27
CAPN3-221ENST00000638141 CUL4BQ13620 913 aa13.37□□□□□ -0.27
CAPN3-221ENST00000638141 OTUD7BQ6GQQ9 843 aa13.37□□□□□ -0.27
CAPN3-221ENST00000638141 CCDC129Q6ZRS4 1044 aa13.37□□□□□ -0.27
CAPN3-221ENST00000638141 SH2D3CQ8N5H7 860 aa13.37□□□□□ -0.27
CAPN3-221ENST00000638141 L3MBTL3Q96JM7 780 aaPredicted RBP13.37□□□□□ -0.27
CAPN3-221ENST00000638141 NOP53Q9NZM5 478 aaKnown RBP13.37□□□□□ -0.27
CAPN3-221ENST00000638141 PCDHGC5Q9Y5F6 944 aa13.37□□□□□ -0.27
CAPN3-221ENST00000638141 KIF1AQ12756 1690 aa13.37□□□□□ -0.27
CAPN3-221ENST00000638141 ZNF233A6NK53 670 aa13.37□□□□□ -0.27
CAPN3-221ENST00000638141 PPIP5K2O43314 1243 aa13.37□□□□□ -0.27
CAPN3-221ENST00000638141 EIF2S2P20042 333 aaKnown RBP13.37□□□□□ -0.27
CAPN3-221ENST00000638141 SEC24CP53992 1094 aa13.37□□□□□ -0.27
CAPN3-221ENST00000638141 MYO1EQ12965 1108 aa13.37□□□□□ -0.27
CAPN3-221ENST00000638141 MSL1Q68DK7 614 aa13.37□□□□□ -0.27
CAPN3-221ENST00000638141 CACNA2D3Q8IZS8 1091 aa13.37□□□□□ -0.27
CAPN3-221ENST00000638141 AIDAQ96BJ3 306 aa13.37□□□□□ -0.27
CAPN3-221ENST00000638141 ALS2CR12Q96Q35 445 aa13.37□□□□□ -0.27
CAPN3-221ENST00000638141 DMGDHQ9UI17 866 aaKnown RBP13.37□□□□□ -0.27
CAPN3-221ENST00000638141 DBNLQ9UJU6 430 aaKnown RBP13.37□□□□□ -0.27
CAPN3-221ENST00000638141 SRGAP2O75044 1071 aa13.36□□□□□ -0.27
CAPN3-221ENST00000638141 SSBP05455 408 aaKnown RBP eCLIP13.36□□□□□ -0.27
CAPN3-221ENST00000638141 CCNG1P51959 295 aa13.36□□□□□ -0.27
CAPN3-221ENST00000638141 VAV2P52735 878 aa13.36□□□□□ -0.27
CAPN3-221ENST00000638141 C2orf54Q08AI8 447 aa13.36□□□□□ -0.27
CAPN3-221ENST00000638141 TEFQ10587 303 aa13.36□□□□□ -0.27
CAPN3-221ENST00000638141 KIAA0753Q2KHM9 967 aa13.36□□□□□ -0.27
CAPN3-221ENST00000638141 CCDC122Q5T0U0 273 aa13.36□□□□□ -0.27
CAPN3-221ENST00000638141 VPS37DQ86XT2 251 aa13.36□□□□□ -0.27
CAPN3-221ENST00000638141 CREG2Q8IUH2 290 aa13.36□□□□□ -0.27
CAPN3-221ENST00000638141 STAMBPL1Q96FJ0 436 aa13.36□□□□□ -0.27
CAPN3-221ENST00000638141 SEC16BQ96JE7 1060 aa13.36□□□□□ -0.27
CAPN3-221ENST00000638141 CAPZA3Q96KX2 299 aa13.36□□□□□ -0.27
CAPN3-221ENST00000638141 HPS5Q9UPZ3 1129 aa13.36□□□□□ -0.27
CAPN3-221ENST00000638141 ZBTB12Q9Y330 459 aaPredicted RBP13.36□□□□□ -0.27
CAPN3-221ENST00000638141 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.36□□□□□ -0.27
CAPN3-221ENST00000638141 CPDO75976 1380 aa13.36□□□□□ -0.27
CAPN3-221ENST00000638141 NHSL1Q5SYE7 1610 aa13.36□□□□□ -0.27
CAPN3-221ENST00000638141 GOLGA8BA8MQT2 603 aa13.36□□□□□ -0.27
CAPN3-221ENST00000638141 MAGEA8P43361 318 aa13.36□□□□□ -0.27
CAPN3-221ENST00000638141 HERVK_113P62684 666 aa13.36□□□□□ -0.27
CAPN3-221ENST00000638141 SPRED3Q2MJR0 410 aa13.36□□□□□ -0.27
CAPN3-221ENST00000638141 LRIG3Q6UXM1 1119 aa13.36□□□□□ -0.27
CAPN3-221ENST00000638141 KRT28Q7Z3Y7 464 aa13.36□□□□□ -0.27
CAPN3-221ENST00000638141 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.36□□□□□ -0.27
CAPN3-221ENST00000638141 LEMD3Q9Y2U8 911 aa13.36□□□□□ -0.27
CAPN3-221ENST00000638141 ENO4A6NNW6 628 aa13.35□□□□□ -0.27
CAPN3-221ENST00000638141 FOXN1O15353 648 aa13.35□□□□□ -0.27
CAPN3-221ENST00000638141 PPFIA2O75334 1257 aa13.35□□□□□ -0.27
CAPN3-221ENST00000638141 ANP32DO95626 131 aa13.35□□□□□ -0.27
CAPN3-221ENST00000638141 IBSPP21815 317 aaPredicted RBP13.35□□□□□ -0.27
CAPN3-221ENST00000638141 HSPA1LP34931 641 aa13.35□□□□□ -0.27
CAPN3-221ENST00000638141 PAPOLAP51003 745 aaKnown RBP13.35□□□□□ -0.27
CAPN3-221ENST00000638141 BYSLQ13895 437 aaKnown RBP13.35□□□□□ -0.27
CAPN3-221ENST00000638141 SDCCAG8Q86SQ7 713 aaPredicted RBP13.35□□□□□ -0.27
CAPN3-221ENST00000638141 TEX9Q8N6V9 391 aa13.35□□□□□ -0.27
CAPN3-221ENST00000638141 HVCN1Q96D96 273 aa13.35□□□□□ -0.27
CAPN3-221ENST00000638141 DNAJC7Q99615 494 aa13.35□□□□□ -0.27
CAPN3-221ENST00000638141 LRRC1Q9BTT6 524 aa13.35□□□□□ -0.27
CAPN3-221ENST00000638141 CHCHD3Q9NX63 227 aaKnown RBP13.35□□□□□ -0.27
CAPN3-221ENST00000638141 SLC5A4Q9NY91 659 aa13.35□□□□□ -0.27
CAPN3-221ENST00000638141 SLC12A6Q9UHW9 1150 aa13.35□□□□□ -0.27
CAPN3-221ENST00000638141 SNX12Q9UMY4 172 aa13.35□□□□□ -0.27
CAPN3-221ENST00000638141 HEG1Q9ULI3 1381 aa13.35□□□□□ -0.27
CAPN3-221ENST00000638141 KLF18A0A0U1RQI7 1052 aa13.35□□□□□ -0.27
CAPN3-221ENST00000638141 PDLIM1O00151 329 aa13.35□□□□□ -0.27
CAPN3-221ENST00000638141 KRT14P02533 472 aa13.35□□□□□ -0.27
CAPN3-221ENST00000638141 HSPD1P10809 573 aaKnown RBP13.35□□□□□ -0.27
CAPN3-221ENST00000638141 KRT9P35527 623 aa13.35□□□□□ -0.27
CAPN3-221ENST00000638141 HAUS3Q68CZ6 603 aa13.35□□□□□ -0.27
CAPN3-221ENST00000638141 MTHFD1LQ6UB35 978 aa13.35□□□□□ -0.27
CAPN3-221ENST00000638141 SPATA4Q8NEY3 305 aa13.35□□□□□ -0.27
CAPN3-221ENST00000638141 ZNF570Q96NI8 536 aa13.35□□□□□ -0.27
CAPN3-221ENST00000638141 NDST4Q9H3R1 872 aa13.35□□□□□ -0.27
CAPN3-221ENST00000638141 GDF3Q9NR23 364 aa13.35□□□□□ -0.27
CAPN3-221ENST00000638141 TRIM10Q9UDY6 481 aa13.35□□□□□ -0.27
CAPN3-221ENST00000638141 PHLPP1O60346 1717 aa13.34□□□□□ -0.27
CAPN3-221ENST00000638141 OPLAHO14841 1288 aa13.34□□□□□ -0.27
CAPN3-221ENST00000638141 IFIT3O14879 490 aaKnown RBP13.34□□□□□ -0.27
CAPN3-221ENST00000638141 LINGO3P0C6S8 592 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms