RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 RAD21O60216 631 aa14.54□□□□□ -0.08
CACNA1A-250ENST00000637809 SNAI1O95863 264 aaPredicted RBP14.54□□□□□ -0.08
CACNA1A-250ENST00000637809 CLTBP09497 229 aa14.54□□□□□ -0.08
CACNA1A-250ENST00000637809 CCSAPQ6IQ19 270 aaPredicted RBP14.54□□□□□ -0.08
CACNA1A-250ENST00000637809 MAMDC4Q6UXC1 1216 aa14.54□□□□□ -0.08
CACNA1A-250ENST00000637809 MSL3Q8N5Y2 521 aaKnown RBP14.54□□□□□ -0.08
CACNA1A-250ENST00000637809 CHMP4BQ9H444 224 aaKnown RBP14.54□□□□□ -0.08
CACNA1A-250ENST00000637809 EPB41L4AQ9HCS5 686 aaPredicted RBP14.54□□□□□ -0.08
CACNA1A-250ENST00000637809 MUC3AQ02505 3323 aa14.54□□□□□ -0.08
CACNA1A-250ENST00000637809 PARP14Q460N5 1801 aa14.53□□□□□ -0.08
CACNA1A-250ENST00000637809 SYNGAP1Q96PV0 1343 aa14.53□□□□□ -0.08
CACNA1A-250ENST00000637809 ATP2A1O14983 1001 aa14.53□□□□□ -0.08
CACNA1A-250ENST00000637809 PQBP1O60828 265 aaKnown RBP14.53□□□□□ -0.08
CACNA1A-250ENST00000637809 DIEXFQ68CQ4 756 aaKnown RBP14.53□□□□□ -0.08
CACNA1A-250ENST00000637809 SNRNP48Q6IEG0 339 aaKnown RBP14.53□□□□□ -0.08
CACNA1A-250ENST00000637809 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.53□□□□□ -0.08
CACNA1A-250ENST00000637809 ANKRD33Q7Z3H0 272 aa14.53□□□□□ -0.08
CACNA1A-250ENST00000637809 STK11IPQ8N1F8 1099 aa14.53□□□□□ -0.08
CACNA1A-250ENST00000637809 KBTBD3Q8NAB2 608 aa14.53□□□□□ -0.08
CACNA1A-250ENST00000637809 PRPF38AQ8NAV1 312 aaKnown RBP14.53□□□□□ -0.08
CACNA1A-250ENST00000637809 KLHDC9Q8NEP7 349 aa14.53□□□□□ -0.08
CACNA1A-250ENST00000637809 APPBP2Q92624 585 aa14.53□□□□□ -0.08
CACNA1A-250ENST00000637809 FGD4Q96M96 766 aa14.53□□□□□ -0.08
CACNA1A-250ENST00000637809 TSEN34Q9BSV6 310 aaKnown RBP14.53□□□□□ -0.08
CACNA1A-250ENST00000637809 RCAN3Q9UKA8 241 aa14.53□□□□□ -0.08
CACNA1A-250ENST00000637809 CNPY2Q9Y2B0 182 aa14.53□□□□□ -0.08
CACNA1A-250ENST00000637809 BAZ2AQ9UIF9 1905 aaKnown RBP14.53□□□□□ -0.08
CACNA1A-250ENST00000637809 SYNRGQ9UMZ2 1314 aa14.52□□□□□ -0.08
CACNA1A-250ENST00000637809 ACLYP53396 1101 aa14.52□□□□□ -0.09
CACNA1A-250ENST00000637809 FAAP100Q0VG06 881 aa14.52□□□□□ -0.09
CACNA1A-250ENST00000637809 TSHZ3Q63HK5 1081 aa14.52□□□□□ -0.09
CACNA1A-250ENST00000637809 ZNF467Q7Z7K2 595 aaPredicted RBP14.52□□□□□ -0.09
CACNA1A-250ENST00000637809 MKL1Q969V6 931 aa14.52□□□□□ -0.09
CACNA1A-250ENST00000637809 TOX2Q96NM4 488 aa14.52□□□□□ -0.09
CACNA1A-250ENST00000637809 MKNK2Q9HBH9 465 aa14.52□□□□□ -0.09
CACNA1A-250ENST00000637809 CLIP2Q9UDT6 1046 aa14.52□□□□□ -0.09
CACNA1A-250ENST00000637809 GREB1LQ9C091 1923 aaPredicted RBP14.51□□□□□ -0.09
CACNA1A-250ENST00000637809 MYADML2A6NDP7 307 aa14.51□□□□□ -0.09
CACNA1A-250ENST00000637809 MINDY4BA8MYZ0 360 aa14.51□□□□□ -0.09
CACNA1A-250ENST00000637809 RNF113AO15541 343 aaKnown RBP14.51□□□□□ -0.09
CACNA1A-250ENST00000637809 GPAA1O43292 621 aa14.51□□□□□ -0.09
CACNA1A-250ENST00000637809 ADCY6O43306 1168 aa14.51□□□□□ -0.09
CACNA1A-250ENST00000637809 IRX5P78411 483 aaPredicted RBP14.51□□□□□ -0.09
CACNA1A-250ENST00000637809 SLC38A10Q9HBR0 1119 aa14.51□□□□□ -0.09
CACNA1A-250ENST00000637809 RAVER2Q9HCJ3 691 aaKnown RBP14.51□□□□□ -0.09
CACNA1A-250ENST00000637809 TMEM39AQ9NV64 488 aa14.51□□□□□ -0.09
CACNA1A-250ENST00000637809 MTMR4Q9NYA4 1195 aa14.51□□□□□ -0.09
CACNA1A-250ENST00000637809 FAM184BQ9ULE4 1060 aa14.51□□□□□ -0.09
CACNA1A-250ENST00000637809 CHD9Q3L8U1 2897 aa14.51□□□□□ -0.09
CACNA1A-250ENST00000637809 MOXD2PA6NHM9 499 aa14.5□□□□□ -0.09
CACNA1A-250ENST00000637809 M0R2C6 588 aa14.5□□□□□ -0.09
CACNA1A-250ENST00000637809 ZBED4O75132 1171 aa14.5□□□□□ -0.09
CACNA1A-250ENST00000637809 DUSP11O75319 330 aaKnown RBP14.5□□□□□ -0.09
CACNA1A-250ENST00000637809 PRDM1O75626 825 aa14.5□□□□□ -0.09
CACNA1A-250ENST00000637809 RAG1P15918 1043 aa14.5□□□□□ -0.09
CACNA1A-250ENST00000637809 CST5P28325 142 aaPredicted RBP14.5□□□□□ -0.09
CACNA1A-250ENST00000637809 ACVR2BQ13705 512 aa14.5□□□□□ -0.09
CACNA1A-250ENST00000637809 KCNA10Q16322 511 aa14.5□□□□□ -0.09
CACNA1A-250ENST00000637809 CPXCR1Q8N123 301 aa14.5□□□□□ -0.09
CACNA1A-250ENST00000637809 MAFAQ8NHW3 353 aaPredicted RBP14.5□□□□□ -0.09
CACNA1A-250ENST00000637809 MYLIPQ8WY64 445 aa14.5□□□□□ -0.09
CACNA1A-250ENST00000637809 KIFC2Q96AC6 838 aa14.5□□□□□ -0.09
CACNA1A-250ENST00000637809 DDX11Q96FC9 970 aa14.5□□□□□ -0.09
CACNA1A-250ENST00000637809 CEP95Q96GE4 821 aa14.5□□□□□ -0.09
CACNA1A-250ENST00000637809 RNPC3Q96LT9 517 aaKnown RBP14.5□□□□□ -0.09
CACNA1A-250ENST00000637809 DCTPP1Q9H773 170 aa14.5□□□□□ -0.09
CACNA1A-250ENST00000637809 STARD7Q9NQZ5 370 aa14.5□□□□□ -0.09
CACNA1A-250ENST00000637809 ZHX1Q9UKY1 873 aaPredicted RBP14.5□□□□□ -0.09
CACNA1A-250ENST00000637809 TBX21Q9UL17 535 aa14.5□□□□□ -0.09
CACNA1A-250ENST00000637809 SYNPO2Q9UMS6 1093 aa14.5□□□□□ -0.09
CACNA1A-250ENST00000637809 TMEM265A0A087WTH1 108 aa14.49□□□□□ -0.09
CACNA1A-250ENST00000637809 ZFYP08048 801 aaPredicted RBP14.49□□□□□ -0.09
CACNA1A-250ENST00000637809 FPGSQ05932 587 aa14.49□□□□□ -0.09
CACNA1A-250ENST00000637809 GMCL1P1Q8NEA9 526 aa14.49□□□□□ -0.09
CACNA1A-250ENST00000637809 NUP133Q8WUM0 1156 aa14.49□□□□□ -0.09
CACNA1A-250ENST00000637809 KATNBL1Q9H079 304 aa14.49□□□□□ -0.09
CACNA1A-250ENST00000637809 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.49□□□□□ -0.09
CACNA1A-250ENST00000637809 FEM1BQ9UK73 627 aa14.49□□□□□ -0.09
CACNA1A-250ENST00000637809 COL11A1P12107 1806 aaPredicted RBP14.49□□□□□ -0.09
CACNA1A-250ENST00000637809 PLIN4Q96Q06 1357 aa14.48□□□□□ -0.09
CACNA1A-250ENST00000637809 DCDC2CA8MYV0 355 aa14.48□□□□□ -0.09
CACNA1A-250ENST00000637809 PATL2C9JE40 543 aaKnown RBP14.48□□□□□ -0.09
CACNA1A-250ENST00000637809 TTLL1O95922 423 aa14.48□□□□□ -0.09
CACNA1A-250ENST00000637809 TIMP1P01033 207 aa14.48□□□□□ -0.09
CACNA1A-250ENST00000637809 GNAT2P19087 354 aa14.48□□□□□ -0.09
CACNA1A-250ENST00000637809 TDO2P48775 406 aa14.48□□□□□ -0.09
CACNA1A-250ENST00000637809 CDK7P50613 346 aa14.48□□□□□ -0.09
CACNA1A-250ENST00000637809 OAZ1P54368 228 aa14.48□□□□□ -0.09
CACNA1A-250ENST00000637809 IFNL3Q8IZI9 196 aa14.48□□□□□ -0.09
CACNA1A-250ENST00000637809 ZNF444Q8N0Y2 327 aaPredicted RBP14.48□□□□□ -0.09
CACNA1A-250ENST00000637809 LRRC47Q8N1G4 583 aaKnown RBP14.48□□□□□ -0.09
CACNA1A-250ENST00000637809 CHST13Q8NET6 341 aa14.48□□□□□ -0.09
CACNA1A-250ENST00000637809 UPF3AQ9H1J1 476 aaKnown RBP14.48□□□□□ -0.09
CACNA1A-250ENST00000637809 ABHD16BQ9H3Z7 469 aa14.48□□□□□ -0.09
CACNA1A-250ENST00000637809 ELP1O95163 1332 aa14.47□□□□□ -0.09
CACNA1A-250ENST00000637809 MYH8P13535 1937 aa14.47□□□□□ -0.09
CACNA1A-250ENST00000637809 CTAGE5O15320 804 aa14.47□□□□□ -0.09
CACNA1A-250ENST00000637809 SLC4A3P48751 1232 aa14.47□□□□□ -0.09
CACNA1A-250ENST00000637809 GJA9P57773 515 aa14.47□□□□□ -0.09
CACNA1A-250ENST00000637809 NKX3-2P78367 333 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms