RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 STX8Q9UNK0 236 aa21.25■□□□□ 0.99
PNKP-225ENST00000636214 PLXNA1Q9UIW2 1896 aa21.24■□□□□ 0.99
PNKP-225ENST00000636214 DNM1LO00429 736 aa21.24■□□□□ 0.99
PNKP-225ENST00000636214 PGK2P07205 417 aa21.24■□□□□ 0.99
PNKP-225ENST00000636214 COL6A1P12109 1028 aa21.24■□□□□ 0.99
PNKP-225ENST00000636214 BMP3P12645 472 aa21.24■□□□□ 0.99
PNKP-225ENST00000636214 CTDSPL2Q05D32 466 aa21.24■□□□□ 0.99
PNKP-225ENST00000636214 REPS2Q8NFH8 660 aa21.24■□□□□ 0.99
PNKP-225ENST00000636214 NRBP1Q9UHY1 535 aa21.24■□□□□ 0.99
PNKP-225ENST00000636214 DIS3Q9Y2L1 958 aaKnown RBP21.24■□□□□ 0.99
PNKP-225ENST00000636214 RANBP6O60518 1105 aaKnown RBP21.23■□□□□ 0.99
PNKP-225ENST00000636214 FDX1P10109 184 aa21.23■□□□□ 0.99
PNKP-225ENST00000636214 SYN1P17600 705 aa21.23■□□□□ 0.99
PNKP-225ENST00000636214 SLC1A4P43007 532 aa21.23■□□□□ 0.99
PNKP-225ENST00000636214 MFAP1P55081 439 aaKnown RBP21.23■□□□□ 0.99
PNKP-225ENST00000636214 FBXO40Q9UH90 709 aa21.23■□□□□ 0.99
PNKP-225ENST00000636214 CNPY2Q9Y2B0 182 aa21.23■□□□□ 0.99
PNKP-225ENST00000636214 STAT2P52630 851 aa21.22■□□□□ 0.99
PNKP-225ENST00000636214 ANO1Q5XXA6 986 aa21.22■□□□□ 0.99
PNKP-225ENST00000636214 SMC5Q8IY18 1101 aa21.22■□□□□ 0.99
PNKP-225ENST00000636214 CHURC1Q8WUH1 139 aa21.22■□□□□ 0.99
PNKP-225ENST00000636214 TINF2Q9BSI4 451 aa21.22■□□□□ 0.99
PNKP-225ENST00000636214 A0A0D9SFI3 127 aa21.21■□□□□ 0.99
PNKP-225ENST00000636214 TMEM232C9JQI7 657 aa21.21■□□□□ 0.99
PNKP-225ENST00000636214 IGHA2P01877 340 aa21.21■□□□□ 0.99
PNKP-225ENST00000636214 RARBP10826 455 aa21.21■□□□□ 0.99
PNKP-225ENST00000636214 ALX1Q15699 326 aa21.21■□□□□ 0.99
PNKP-225ENST00000636214 LRRC26Q2I0M4 334 aa21.21■□□□□ 0.99
PNKP-225ENST00000636214 ZNF792Q3KQV3 632 aa21.21■□□□□ 0.99
PNKP-225ENST00000636214 PRAMEF19Q5SWL8 479 aa21.21■□□□□ 0.99
PNKP-225ENST00000636214 GJC2Q5T442 439 aaPredicted RBP21.21■□□□□ 0.99
PNKP-225ENST00000636214 VPS53Q5VIR6 699 aa21.21■□□□□ 0.99
PNKP-225ENST00000636214 FAM160B2Q86V87 743 aa21.21■□□□□ 0.99
PNKP-225ENST00000636214 CHD1LQ86WJ1 897 aa21.21■□□□□ 0.99
PNKP-225ENST00000636214 FAM227BQ96M60 508 aa21.21■□□□□ 0.99
PNKP-225ENST00000636214 PRO3102Q9H379 93 aa21.21■□□□□ 0.99
PNKP-225ENST00000636214 SLC38A10Q9HBR0 1119 aa21.21■□□□□ 0.99
PNKP-225ENST00000636214 RAVER2Q9HCJ3 691 aaKnown RBP21.21■□□□□ 0.99
PNKP-225ENST00000636214 PRKAG2Q9UGJ0 569 aa21.21■□□□□ 0.99
PNKP-225ENST00000636214 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.21■□□□□ 0.99
PNKP-225ENST00000636214 ATP2A1O14983 1001 aa21.2■□□□□ 0.98
PNKP-225ENST00000636214 ATN1P54259 1190 aaPredicted RBP21.2■□□□□ 0.98
PNKP-225ENST00000636214 OAZ1P54368 228 aa21.2■□□□□ 0.98
PNKP-225ENST00000636214 NMIQ13287 307 aaPredicted RBP21.2■□□□□ 0.98
PNKP-225ENST00000636214 RRP12Q5JTH9 1297 aaKnown RBP21.2■□□□□ 0.98
PNKP-225ENST00000636214 ANKRD35Q8N283 1001 aa21.2■□□□□ 0.98
PNKP-225ENST00000636214 EXOC6Q8TAG9 804 aa21.2■□□□□ 0.98
PNKP-225ENST00000636214 GMCL1Q96IK5 515 aa21.2■□□□□ 0.98
PNKP-225ENST00000636214 ANAPC4Q9UJX5 808 aa21.2■□□□□ 0.98
PNKP-225ENST00000636214 SMCHD1A6NHR9 2005 aa21.19■□□□□ 0.98
PNKP-225ENST00000636214 ORC4O43929 436 aa21.19■□□□□ 0.98
PNKP-225ENST00000636214 MCCP23508 829 aa21.19■□□□□ 0.98
PNKP-225ENST00000636214 MAGEA10P43363 369 aaPredicted RBP21.19■□□□□ 0.98
PNKP-225ENST00000636214 MSL3Q8N5Y2 521 aaKnown RBP21.19■□□□□ 0.98
PNKP-225ENST00000636214 CHST13Q8NET6 341 aa21.19■□□□□ 0.98
PNKP-225ENST00000636214 CHMP4CQ96CF2 233 aa21.19■□□□□ 0.98
PNKP-225ENST00000636214 GDF15Q99988 308 aa21.19■□□□□ 0.98
PNKP-225ENST00000636214 MTMR7Q9Y216 660 aa21.19■□□□□ 0.98
PNKP-225ENST00000636214 CCDC171Q6TFL3 1326 aa21.19■□□□□ 0.98
PNKP-225ENST00000636214 FOXP2O15409 715 aa21.18■□□□□ 0.98
PNKP-225ENST00000636214 AKR1A1P14550 325 aa21.18■□□□□ 0.98
PNKP-225ENST00000636214 BMP8BP34820 402 aa21.18■□□□□ 0.98
PNKP-225ENST00000636214 CCDC96Q2M329 555 aa21.18■□□□□ 0.98
PNKP-225ENST00000636214 STAG1Q8WVM7 1258 aa21.18■□□□□ 0.98
PNKP-225ENST00000636214 UBE2OQ9C0C9 1292 aaKnown RBP21.18■□□□□ 0.98
PNKP-225ENST00000636214 XPNPEP3Q9NQH7 507 aa21.18■□□□□ 0.98
PNKP-225ENST00000636214 HOMER2Q9NSB8 354 aa21.18■□□□□ 0.98
PNKP-225ENST00000636214 DIAPH3Q9NSV4 1193 aa21.18■□□□□ 0.98
PNKP-225ENST00000636214 RIPK3Q9Y572 518 aa21.18■□□□□ 0.98
PNKP-225ENST00000636214 FGAP02671 866 aa21.17■□□□□ 0.98
PNKP-225ENST00000636214 HSPD1P10809 573 aaKnown RBP21.17■□□□□ 0.98
PNKP-225ENST00000636214 NUCB1Q02818 461 aa21.17■□□□□ 0.98
PNKP-225ENST00000636214 RNF180Q86T96 592 aa21.17■□□□□ 0.98
PNKP-225ENST00000636214 LBHD1Q9BQE6 289 aaPredicted RBP21.17■□□□□ 0.98
PNKP-225ENST00000636214 INCENPQ9NQS7 918 aa21.17■□□□□ 0.98
PNKP-225ENST00000636214 ZHX1Q9UKY1 873 aaPredicted RBP21.17■□□□□ 0.98
PNKP-225ENST00000636214 ZMYM6O95789 1325 aa21.17■□□□□ 0.98
PNKP-225ENST00000636214 SYNGAP1Q96PV0 1343 aa21.17■□□□□ 0.98
PNKP-225ENST00000636214 DNAH12Q6ZR08 3092 aa21.17■□□□□ 0.98
PNKP-225ENST00000636214 HIP1O00291 1037 aa21.16■□□□□ 0.98
PNKP-225ENST00000636214 NMT2O60551 498 aa21.16■□□□□ 0.98
PNKP-225ENST00000636214 RTP1P59025 263 aa21.16■□□□□ 0.98
PNKP-225ENST00000636214 LRRC41Q15345 812 aa21.16■□□□□ 0.98
PNKP-225ENST00000636214 RCSD1Q6JBY9 416 aa21.16■□□□□ 0.98
PNKP-225ENST00000636214 KCTD1Q719H9 257 aa21.16■□□□□ 0.98
PNKP-225ENST00000636214 PLEKHM2Q8IWE5 1019 aa21.16■□□□□ 0.98
PNKP-225ENST00000636214 ACAD9Q9H845 621 aa21.16■□□□□ 0.98
PNKP-225ENST00000636214 ATP11BQ9Y2G3 1177 aa21.16■□□□□ 0.98
PNKP-225ENST00000636214 IGHDP01880 384 aa21.15■□□□□ 0.98
PNKP-225ENST00000636214 PCP11498 1178 aaKnown RBP21.15■□□□□ 0.98
PNKP-225ENST00000636214 SDSP20132 328 aa21.15■□□□□ 0.98
PNKP-225ENST00000636214 HAND2P61296 217 aa21.15■□□□□ 0.98
PNKP-225ENST00000636214 TKFCQ3LXA3 575 aa21.15■□□□□ 0.98
PNKP-225ENST00000636214 MFSD6Q6ZSS7 791 aa21.15■□□□□ 0.98
PNKP-225ENST00000636214 ZNF589Q86UQ0 364 aaPredicted RBP21.15■□□□□ 0.98
PNKP-225ENST00000636214 DCAF4Q8WV16 495 aa21.15■□□□□ 0.98
PNKP-225ENST00000636214 RNF41Q9H4P4 317 aaPredicted RBP21.15■□□□□ 0.98
PNKP-225ENST00000636214 IL17RBQ9NRM6 502 aa21.15■□□□□ 0.98
PNKP-225ENST00000636214 PLA2G6O60733 806 aa21.14■□□□□ 0.97
PNKP-225ENST00000636214 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms