RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 SYN1P17600 705 aa18.45■□□□□ 0.54
LINC00339-209ENST00000635450 CAPN2P17655 700 aa18.45■□□□□ 0.54
LINC00339-209ENST00000635450 CNGA1P29973 690 aa18.45■□□□□ 0.54
LINC00339-209ENST00000635450 CTDSPL2Q05D32 466 aa18.45■□□□□ 0.54
LINC00339-209ENST00000635450 LRRC26Q2I0M4 334 aa18.45■□□□□ 0.54
LINC00339-209ENST00000635450 PRAMEF19Q5SWL8 479 aa18.45■□□□□ 0.54
LINC00339-209ENST00000635450 OLFML2BQ68BL8 750 aa18.45■□□□□ 0.54
LINC00339-209ENST00000635450 RIOX2Q8IUF8 465 aa18.45■□□□□ 0.54
LINC00339-209ENST00000635450 CHMP4CQ96CF2 233 aa18.45■□□□□ 0.54
LINC00339-209ENST00000635450 SLF1Q9BQI6 1058 aa18.45■□□□□ 0.54
LINC00339-209ENST00000635450 MTMR4Q9NYA4 1195 aa18.45■□□□□ 0.54
LINC00339-209ENST00000635450 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.45■□□□□ 0.54
LINC00339-209ENST00000635450 LCTP09848 1927 aa18.45■□□□□ 0.54
LINC00339-209ENST00000635450 STRNO43815 780 aa18.44■□□□□ 0.54
LINC00339-209ENST00000635450 FGAP02671 866 aa18.44■□□□□ 0.54
LINC00339-209ENST00000635450 MAML3Q96JK9 1138 aa18.44■□□□□ 0.54
LINC00339-209ENST00000635450 RIPK3Q9Y572 518 aa18.44■□□□□ 0.54
LINC00339-209ENST00000635450 ZMYM6O95789 1325 aa18.44■□□□□ 0.54
LINC00339-209ENST00000635450 LRRC37A2A6NM11 1700 aa18.43■□□□□ 0.54
LINC00339-209ENST00000635450 NMT2O60551 498 aa18.43■□□□□ 0.54
LINC00339-209ENST00000635450 TSPY3P0CV98 308 aa18.43■□□□□ 0.54
LINC00339-209ENST00000635450 TSPY8P0CW00 308 aa18.43■□□□□ 0.54
LINC00339-209ENST00000635450 STAT3P40763 770 aa18.43■□□□□ 0.54
LINC00339-209ENST00000635450 NEDD1Q8NHV4 660 aa18.43■□□□□ 0.54
LINC00339-209ENST00000635450 RUFY2Q8WXA3 655 aa18.43■□□□□ 0.54
LINC00339-209ENST00000635450 FCER1AP12319 257 aa18.42■□□□□ 0.54
LINC00339-209ENST00000635450 TFAP4Q01664 338 aa18.42■□□□□ 0.54
LINC00339-209ENST00000635450 SNRNP48Q6IEG0 339 aaKnown RBP18.42■□□□□ 0.54
LINC00339-209ENST00000635450 ABRAQ8N0Z2 381 aa18.42■□□□□ 0.54
LINC00339-209ENST00000635450 MMP19Q99542 508 aa18.42■□□□□ 0.54
LINC00339-209ENST00000635450 ANAPC4Q9UJX5 808 aa18.42■□□□□ 0.54
LINC00339-209ENST00000635450 SOX1O00570 391 aaPredicted RBP18.41■□□□□ 0.54
LINC00339-209ENST00000635450 SLC25A27O95847 323 aa18.41■□□□□ 0.54
LINC00339-209ENST00000635450 TTLL1O95922 423 aa18.41■□□□□ 0.54
LINC00339-209ENST00000635450 TAL1P17542 331 aaPredicted RBP18.41■□□□□ 0.54
LINC00339-209ENST00000635450 MKL1Q969V6 931 aa18.41■□□□□ 0.54
LINC00339-209ENST00000635450 LENG1Q96BZ8 264 aaPredicted RBP18.41■□□□□ 0.54
LINC00339-209ENST00000635450 IL17RBQ9NRM6 502 aa18.41■□□□□ 0.54
LINC00339-209ENST00000635450 RAD50Q92878 1312 aa18.41■□□□□ 0.54
LINC00339-209ENST00000635450 ZNF792Q3KQV3 632 aa18.4■□□□□ 0.54
LINC00339-209ENST00000635450 GJC2Q5T442 439 aaPredicted RBP18.4■□□□□ 0.54
LINC00339-209ENST00000635450 CPXCR1Q8N123 301 aa18.4■□□□□ 0.54
LINC00339-209ENST00000635450 GMCL1P1Q8NEA9 526 aa18.4■□□□□ 0.54
LINC00339-209ENST00000635450 KIFC2Q96AC6 838 aa18.4■□□□□ 0.54
LINC00339-209ENST00000635450 GDF15Q99988 308 aa18.4■□□□□ 0.54
LINC00339-209ENST00000635450 TEX13BQ9BXU2 312 aa18.4■□□□□ 0.54
LINC00339-209ENST00000635450 RAVER2Q9HCJ3 691 aaKnown RBP18.4■□□□□ 0.54
LINC00339-209ENST00000635450 TOMM22Q9NS69 142 aa18.4■□□□□ 0.54
LINC00339-209ENST00000635450 TSPY2A6NKD2 308 aa18.39■□□□□ 0.53
LINC00339-209ENST00000635450 CHMLP26374 656 aa18.39■□□□□ 0.53
LINC00339-209ENST00000635450 MAGEA10P43363 369 aaPredicted RBP18.39■□□□□ 0.53
LINC00339-209ENST00000635450 SLC4A3P48751 1232 aa18.39■□□□□ 0.53
LINC00339-209ENST00000635450 ATN1P54259 1190 aaPredicted RBP18.39■□□□□ 0.53
LINC00339-209ENST00000635450 PPP4R3BQ5MIZ7 849 aa18.39■□□□□ 0.53
LINC00339-209ENST00000635450 SLFN13Q68D06 897 aa18.39■□□□□ 0.53
LINC00339-209ENST00000635450 DSCC1Q9BVC3 393 aa18.39■□□□□ 0.53
LINC00339-209ENST00000635450 SENP6Q9GZR1 1112 aaPredicted RBP18.39■□□□□ 0.53
LINC00339-209ENST00000635450 ZNF213O14771 459 aa18.38■□□□□ 0.53
LINC00339-209ENST00000635450 SEPT4O43236 478 aa18.38■□□□□ 0.53
LINC00339-209ENST00000635450 RANBP6O60518 1105 aaKnown RBP18.38■□□□□ 0.53
LINC00339-209ENST00000635450 HAND2P61296 217 aa18.38■□□□□ 0.53
LINC00339-209ENST00000635450 KCTD2Q14681 263 aa18.38■□□□□ 0.53
LINC00339-209ENST00000635450 ERICH6BQ5W0A0 696 aa18.38■□□□□ 0.53
LINC00339-209ENST00000635450 PRPF38AQ8NAV1 312 aaKnown RBP18.38■□□□□ 0.53
LINC00339-209ENST00000635450 FGD4Q96M96 766 aa18.38■□□□□ 0.53
LINC00339-209ENST00000635450 SLC38A10Q9HBR0 1119 aa18.38■□□□□ 0.53
LINC00339-209ENST00000635450 CTNNA3Q9UI47 895 aa18.38■□□□□ 0.53
LINC00339-209ENST00000635450 DNM1LO00429 736 aa18.37■□□□□ 0.53
LINC00339-209ENST00000635450 ORC4O43929 436 aa18.37■□□□□ 0.53
LINC00339-209ENST00000635450 MSCO60682 206 aa18.37■□□□□ 0.53
LINC00339-209ENST00000635450 PCP11498 1178 aaKnown RBP18.37■□□□□ 0.53
LINC00339-209ENST00000635450 BMP3P12645 472 aa18.37■□□□□ 0.53
LINC00339-209ENST00000635450 RRP12Q5JTH9 1297 aaKnown RBP18.37■□□□□ 0.53
LINC00339-209ENST00000635450 MFSD6Q6ZSS7 791 aa18.37■□□□□ 0.53
LINC00339-209ENST00000635450 TINF2Q9BSI4 451 aa18.37■□□□□ 0.53
LINC00339-209ENST00000635450 RNF41Q9H4P4 317 aaPredicted RBP18.37■□□□□ 0.53
LINC00339-209ENST00000635450 SLC5A4Q9NY91 659 aa18.37■□□□□ 0.53
LINC00339-209ENST00000635450 ISY1Q9ULR0 285 aaKnown RBP18.37■□□□□ 0.53
LINC00339-209ENST00000635450 STX8Q9UNK0 236 aa18.37■□□□□ 0.53
LINC00339-209ENST00000635450 DNAJC25-GNG10A0A024R161 153 aa18.36■□□□□ 0.53
LINC00339-209ENST00000635450 TMEM232C9JQI7 657 aa18.36■□□□□ 0.53
LINC00339-209ENST00000635450 ZNF536O15090 1300 aa18.36■□□□□ 0.53
LINC00339-209ENST00000635450 MYCNP04198 464 aaPredicted RBP18.36■□□□□ 0.53
LINC00339-209ENST00000635450 MCCP23508 829 aa18.36■□□□□ 0.53
LINC00339-209ENST00000635450 SNAP25P60880 206 aa18.36■□□□□ 0.53
LINC00339-209ENST00000635450 IMMTQ16891 758 aaKnown RBP18.36■□□□□ 0.53
LINC00339-209ENST00000635450 AKNAD1Q5T1N1 836 aa18.36■□□□□ 0.53
LINC00339-209ENST00000635450 KCTD1Q719H9 257 aa18.36■□□□□ 0.53
LINC00339-209ENST00000635450 LRCH3Q96II8 777 aa18.36■□□□□ 0.53
LINC00339-209ENST00000635450 HOMER2Q9NSB8 354 aa18.36■□□□□ 0.53
LINC00339-209ENST00000635450 FEM1BQ9UK73 627 aa18.36■□□□□ 0.53
LINC00339-209ENST00000635450 SYNPO2Q9UMS6 1093 aa18.36■□□□□ 0.53
LINC00339-209ENST00000635450 MTMR7Q9Y216 660 aa18.36■□□□□ 0.53
LINC00339-209ENST00000635450 ATP2A1O14983 1001 aa18.35■□□□□ 0.53
LINC00339-209ENST00000635450 FGRP09769 529 aa18.35■□□□□ 0.53
LINC00339-209ENST00000635450 ZNF865P0CJ78 1059 aaPredicted RBP18.35■□□□□ 0.53
LINC00339-209ENST00000635450 TBC1D10CQ8IV04 446 aa18.35■□□□□ 0.53
LINC00339-209ENST00000635450 PPP4R2Q9NY27 417 aa18.35■□□□□ 0.53
LINC00339-209ENST00000635450 ADCY6O43306 1168 aa18.34■□□□□ 0.53
LINC00339-209ENST00000635450 ZBED4O75132 1171 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms