RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 RASA1P20936 1047 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 IBSPP21815 317 aaPredicted RBP8.47□□□□□ -1.05
PKP4-217ENST00000628904 PTPREP23469 700 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 NONOQ15233 471 aaKnown RBP eCLIP8.47□□□□□ -1.051e-6■■■■□ 24.7
PKP4-217ENST00000628904 SEC23AQ15436 765 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 PKN1Q16512 942 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 KCTD19Q17RG1 926 aaPredicted RBP8.47□□□□□ -1.05
PKP4-217ENST00000628904 KIF4BQ2VIQ3 1234 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 CCDC148Q8NFR7 591 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 NELFBQ8WX92 580 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 SEPT11Q9NVA2 429 aaKnown RBP8.47□□□□□ -1.05
PKP4-217ENST00000628904 GUCA1BQ9UMX6 200 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 TFR2Q9UP52 801 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 PCDHA1Q9Y5I3 950 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 PSDA5PKW4 1024 aaPredicted RBP8.47□□□□□ -1.05
PKP4-217ENST00000628904 SFI1A8K8P3 1242 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 PRPF3O43395 683 aaKnown RBP8.47□□□□□ -1.05
PKP4-217ENST00000628904 MYO1BO43795 1136 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 ZNF500O60304 480 aaPredicted RBP8.47□□□□□ -1.05
PKP4-217ENST00000628904 RNASE9P60153 205 aaKnown RBP8.47□□□□□ -1.05
PKP4-217ENST00000628904 PTPAQ15257 358 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 ATL3Q6DD88 541 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 NCAPH2Q6IBW4 605 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 CABP7Q86V35 215 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 RDH13Q8NBN7 331 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 PAGE5Q96GU1 130 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 FAM207AQ9NSI2 230 aaPredicted RBP8.47□□□□□ -1.05
PKP4-217ENST00000628904 FBXO2Q9UK22 296 aaPredicted RBP8.47□□□□□ -1.05
PKP4-217ENST00000628904 C5P01031 1676 aa8.47□□□□□ -1.05
PKP4-217ENST00000628904 SALL1Q9NSC2 1324 aa8.46□□□□□ -1.05
PKP4-217ENST00000628904 PLCG2P16885 1265 aa8.46□□□□□ -1.05
PKP4-217ENST00000628904 TM4SF1P30408 202 aa8.46□□□□□ -1.05
PKP4-217ENST00000628904 CRKP46108 304 aa8.46□□□□□ -1.05
PKP4-217ENST00000628904 GNAQP50148 359 aa8.46□□□□□ -1.05
PKP4-217ENST00000628904 TDRD12Q587J7 1177 aaKnown RBP8.46□□□□□ -1.05
PKP4-217ENST00000628904 RESP18Q5W5W9 173 aa8.46□□□□□ -1.05
PKP4-217ENST00000628904 POTEDQ86YR6 584 aa8.46□□□□□ -1.05
PKP4-217ENST00000628904 CAPZA3Q96KX2 299 aa8.46□□□□□ -1.05
PKP4-217ENST00000628904 BAG1Q99933 345 aaPredicted RBP8.46□□□□□ -1.05
PKP4-217ENST00000628904 STK32BQ9NY57 414 aa8.46□□□□□ -1.05
PKP4-217ENST00000628904 PODXL2Q9NZ53 605 aa8.46□□□□□ -1.05
PKP4-217ENST00000628904 ZNF215Q9UL58 517 aaPredicted RBP8.46□□□□□ -1.05
PKP4-217ENST00000628904 GNA11P29992 359 aa8.46□□□□□ -1.06
PKP4-217ENST00000628904 MRPS25P82663 173 aaKnown RBP8.46□□□□□ -1.06
PKP4-217ENST00000628904 ICA1Q05084 483 aa8.46□□□□□ -1.06
PKP4-217ENST00000628904 ELF2Q15723 593 aa8.46□□□□□ -1.06
PKP4-217ENST00000628904 CALCRLQ16602 461 aa8.46□□□□□ -1.06
PKP4-217ENST00000628904 TMEM266Q2M3C6 531 aa8.46□□□□□ -1.06
PKP4-217ENST00000628904 HS1BP3Q53T59 392 aa8.46□□□□□ -1.06
PKP4-217ENST00000628904 ANKRD13CQ8N6S4 541 aa8.46□□□□□ -1.06
PKP4-217ENST00000628904 ZNF512BQ96KM6 892 aaPredicted RBP8.46□□□□□ -1.06
PKP4-217ENST00000628904 GDAP1L1Q96MZ0 367 aa8.46□□□□□ -1.06
PKP4-217ENST00000628904 SLF1Q9BQI6 1058 aa8.46□□□□□ -1.06
PKP4-217ENST00000628904 VIRMAQ69YN4 1812 aaKnown RBP8.46□□□□□ -1.06
PKP4-217ENST00000628904 CNTNAP4Q9C0A0 1308 aa8.46□□□□□ -1.06
PKP4-217ENST00000628904 CYTH3O43739 400 aa8.46□□□□□ -1.06
PKP4-217ENST00000628904 PPP6R2O75170 966 aa8.46□□□□□ -1.06
PKP4-217ENST00000628904 ALDH1B1P30837 517 aa8.46□□□□□ -1.06
PKP4-217ENST00000628904 STAT3P40763 770 aa8.46□□□□□ -1.06
PKP4-217ENST00000628904 CSGALNACT2Q8N6G5 542 aa8.46□□□□□ -1.06
PKP4-217ENST00000628904 PSTPIP2Q9H939 334 aa8.46□□□□□ -1.06
PKP4-217ENST00000628904 SRPRBQ9Y5M8 271 aaKnown RBP8.46□□□□□ -1.06
PKP4-217ENST00000628904 SOWAHDA6NJG2 315 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 ECE2O60344 883 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 CASP14P31944 242 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 MCM6Q14566 821 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 SLFN13Q68D06 897 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 KIAA1328Q86T90 577 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 CAGE1Q8TC20 777 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 MAP3K14Q99558 947 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.45□□□□□ -1.06
PKP4-217ENST00000628904 NLRC4Q9NPP4 1024 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 STRCP1A6NGW2 1772 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 RFX7Q2KHR2 1363 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 SPDYE3A6NKU9 549 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 POLR3GO15318 223 aaPredicted RBP8.45□□□□□ -1.06
PKP4-217ENST00000628904 DDAH1O94760 285 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 FCER1AP12319 257 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 PLCG1P19174 1290 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 PDE6BP35913 854 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 ADCY7P51828 1080 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 FAM193AP78312 1265 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 CCDC40Q4G0X9 1142 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 KRT79Q5XKE5 535 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 CERS5Q8N5B7 392 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 UBXN4Q92575 508 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.45□□□□□ -1.06
PKP4-217ENST00000628904 PCDHA4Q9UN74 947 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 MACROD2A1Z1Q3 448 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 EEF2P13639 858 aaKnown RBP8.45□□□□□ -1.06
PKP4-217ENST00000628904 GSDMDP57764 484 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 DLGAP5Q15398 846 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 PFKFB3Q16875 520 aaPredicted RBP8.45□□□□□ -1.06
PKP4-217ENST00000628904 ERCC6LQ2NKX8 1250 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 CDC42EP5Q6NZY7 148 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 ARMCX5Q6P1M9 558 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 PROM2Q8N271 834 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 AFDNP55196 1824 aaKnown RBP8.45□□□□□ -1.06
PKP4-217ENST00000628904 KIF1AQ12756 1690 aa8.45□□□□□ -1.06
PKP4-217ENST00000628904 KRT9P35527 623 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms