RNA–Protein interactions for RNA: ENST00000628742.2

SOX9-AS1-218, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 733 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-218ENST00000628742 EAF2Q96CJ1 260 aaPredicted RBP8.23□□□□□ -1.09
SOX9-AS1-218ENST00000628742 TINF2Q9BSI4 451 aa8.23□□□□□ -1.09
SOX9-AS1-218ENST00000628742 SNRKQ9NRH2 765 aa8.23□□□□□ -1.09
SOX9-AS1-218ENST00000628742 SLC5A4Q9NY91 659 aa8.23□□□□□ -1.09
SOX9-AS1-218ENST00000628742 SAP30BPQ9UHR5 308 aaKnown RBP8.23□□□□□ -1.09
SOX9-AS1-218ENST00000628742 MUC6Q6W4X9 2439 aa8.23□□□□□ -1.09
SOX9-AS1-218ENST00000628742 NAV1Q8NEY1 1877 aa8.23□□□□□ -1.09
SOX9-AS1-218ENST00000628742 ELP1O95163 1332 aa8.23□□□□□ -1.09
SOX9-AS1-218ENST00000628742 ZNFX1Q9P2E3 1918 aaKnown RBP8.23□□□□□ -1.09
SOX9-AS1-218ENST00000628742 MOXD2PA6NHM9 499 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 WDR46O15213 610 aaKnown RBP8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 TIMP1P01033 207 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 NUDT7P0C024 238 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 COL9A1P20849 921 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 CYP7A1P22680 504 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 CNGA1P29973 690 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 PLA2G5P39877 138 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 FPGSQ05932 587 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 TMEM132BQ14DG7 1078 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 SEPT2Q15019 361 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 RAB3GAP1Q15042 981 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 TTC39AQ5SRH9 613 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 VARS2Q5ST30 1063 aaKnown RBP8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 MFSD5Q6N075 450 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 TMEM179Q6ZVK1 233 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 RNF180Q86T96 592 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 SLC43A3Q8NBI5 491 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 VWCEQ96DN2 955 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 DDX27Q96GQ7 796 aaKnown RBP8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 RNPC3Q96LT9 517 aaKnown RBP8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 ASB2Q96Q27 587 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 FEZ1Q99689 392 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 LARP6Q9BRS8 491 aaKnown RBP8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 TRIM34Q9BYJ4 488 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 TANGO6Q9C0B7 1094 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 UPF3AQ9H1J1 476 aaKnown RBP8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 ZNF576Q9H609 170 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 VCPKMTQ9H867 229 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 DCP1AQ9NPI6 582 aaPredicted RBP8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 XPNPEP3Q9NQH7 507 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 TLR7Q9NYK1 1049 aaKnown RBP8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 SWAP70Q9UH65 585 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 NDUFB9Q9Y6M9 179 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 ZBED9Q6R2W3 1325 aa8.22□□□□□ -1.09
SOX9-AS1-218ENST00000628742 PLXNA1Q9UIW2 1896 aa8.21□□□□□ -1.09
SOX9-AS1-218ENST00000628742 CTAGE5O15320 804 aa8.21□□□□□ -1.1
SOX9-AS1-218ENST00000628742 RARBP10826 455 aa8.21□□□□□ -1.1
SOX9-AS1-218ENST00000628742 FCER1AP12319 257 aa8.21□□□□□ -1.1
SOX9-AS1-218ENST00000628742 AKR1A1P14550 325 aa8.21□□□□□ -1.1
SOX9-AS1-218ENST00000628742 COPB2P35606 906 aa8.21□□□□□ -1.1
SOX9-AS1-218ENST00000628742 ACLYP53396 1101 aa8.21□□□□□ -1.1
SOX9-AS1-218ENST00000628742 MFSD10Q14728 455 aa8.21□□□□□ -1.1
SOX9-AS1-218ENST00000628742 TMEM240Q5SV17 173 aa8.21□□□□□ -1.1
SOX9-AS1-218ENST00000628742 PRAMEF19Q5SWL8 479 aa8.21□□□□□ -1.1
SOX9-AS1-218ENST00000628742 TIFAQ96CG3 184 aa8.21□□□□□ -1.1
SOX9-AS1-218ENST00000628742 ATG4CQ96DT6 458 aa8.21□□□□□ -1.1
SOX9-AS1-218ENST00000628742 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.21□□□□□ -1.1
SOX9-AS1-218ENST00000628742 PBX4Q9BYU1 374 aa8.21□□□□□ -1.1
SOX9-AS1-218ENST00000628742 KATNBL1Q9H079 304 aa8.21□□□□□ -1.1
SOX9-AS1-218ENST00000628742 CABP5Q9NP86 173 aa8.21□□□□□ -1.1
SOX9-AS1-218ENST00000628742 COL11A1P12107 1806 aaPredicted RBP8.21□□□□□ -1.1
SOX9-AS1-218ENST00000628742 MROH7Q68CQ1 1323 aa8.21□□□□□ -1.1
SOX9-AS1-218ENST00000628742 SYNRGQ9UMZ2 1314 aa8.21□□□□□ -1.1
SOX9-AS1-218ENST00000628742 MYO9BQ13459 2157 aa8.2□□□□□ -1.1
SOX9-AS1-218ENST00000628742 ZNF316A6NFI3 1004 aaPredicted RBP8.2□□□□□ -1.1
SOX9-AS1-218ENST00000628742 VWA5AO00534 786 aa8.2□□□□□ -1.1
SOX9-AS1-218ENST00000628742 IPO8O15397 1037 aaKnown RBP8.2□□□□□ -1.1
SOX9-AS1-218ENST00000628742 DUSP11O75319 330 aaKnown RBP8.2□□□□□ -1.1
SOX9-AS1-218ENST00000628742 SNAI1O95863 264 aaPredicted RBP8.2□□□□□ -1.1
SOX9-AS1-218ENST00000628742 CD4P01730 458 aa8.2□□□□□ -1.1
SOX9-AS1-218ENST00000628742 TAL1P17542 331 aaPredicted RBP8.2□□□□□ -1.1
SOX9-AS1-218ENST00000628742 MAP3K12Q12852 859 aa8.2□□□□□ -1.1
SOX9-AS1-218ENST00000628742 ADGRE1Q14246 886 aa8.2□□□□□ -1.1
SOX9-AS1-218ENST00000628742 ZYXQ15942 572 aaKnown RBP8.2□□□□□ -1.1
SOX9-AS1-218ENST00000628742 MIGA1Q8NAN2 632 aa8.2□□□□□ -1.1
SOX9-AS1-218ENST00000628742 NUP133Q8WUM0 1156 aa8.2□□□□□ -1.1
SOX9-AS1-218ENST00000628742 HERVK_113Q902F9 699 aa8.2□□□□□ -1.1
SOX9-AS1-218ENST00000628742 CCDC17Q96LX7 622 aa8.2□□□□□ -1.1
SOX9-AS1-218ENST00000628742 FGD4Q96M96 766 aa8.2□□□□□ -1.1
SOX9-AS1-218ENST00000628742 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.2□□□□□ -1.1
SOX9-AS1-218ENST00000628742 ANTXR1Q9H6X2 564 aa8.2□□□□□ -1.1
SOX9-AS1-218ENST00000628742 SH2D4AQ9H788 454 aa8.2□□□□□ -1.1
SOX9-AS1-218ENST00000628742 PRDM5Q9NQX1 630 aaPredicted RBP8.2□□□□□ -1.1
SOX9-AS1-218ENST00000628742 CXXC1Q9P0U4 656 aaPredicted RBP8.2□□□□□ -1.1
SOX9-AS1-218ENST00000628742 PPP1R9AQ9ULJ8 1098 aa8.2□□□□□ -1.1
SOX9-AS1-218ENST00000628742 SYNPO2Q9UMS6 1093 aa8.2□□□□□ -1.1
SOX9-AS1-218ENST00000628742 BRWD1Q9NSI6 2320 aa8.19□□□□□ -1.1
SOX9-AS1-218ENST00000628742 ADCY6O43306 1168 aa8.19□□□□□ -1.1
SOX9-AS1-218ENST00000628742 IDH1O75874 414 aaKnown RBP8.19□□□□□ -1.1
SOX9-AS1-218ENST00000628742 PGK1P00558 417 aa8.19□□□□□ -1.1
SOX9-AS1-218ENST00000628742 RAG1P15918 1043 aa8.19□□□□□ -1.1
SOX9-AS1-218ENST00000628742 PDE6AP16499 860 aa8.19□□□□□ -1.1
SOX9-AS1-218ENST00000628742 USP5P45974 858 aa8.19□□□□□ -1.1
SOX9-AS1-218ENST00000628742 GJA9P57773 515 aa8.19□□□□□ -1.1
SOX9-AS1-218ENST00000628742 C12orf60Q5U649 245 aa8.19□□□□□ -1.1
SOX9-AS1-218ENST00000628742 ANO1Q5XXA6 986 aa8.19□□□□□ -1.1
SOX9-AS1-218ENST00000628742 C16orf86Q6ZW13 317 aa8.19□□□□□ -1.1
SOX9-AS1-218ENST00000628742 FAM126BQ8IXS8 530 aa8.19□□□□□ -1.1
SOX9-AS1-218ENST00000628742 SLC44A5Q8NCS7 719 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms