RNA–Protein interactions for RNA: ENST00000627450.2

PDXDC1-218, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-218ENST00000627450 USP50Q70EL3 339 aaPredicted RBP15.53■□□□□ 0.08
PDXDC1-218ENST00000627450 MOB2Q70IA6 237 aa15.53■□□□□ 0.08
PDXDC1-218ENST00000627450 RBM27Q9P2N5 1060 aaKnown RBP15.53■□□□□ 0.08
PDXDC1-218ENST00000627450 SMCHD1A6NHR9 2005 aa15.53■□□□□ 0.08
PDXDC1-218ENST00000627450 KRT2P35908 639 aa15.53■□□□□ 0.08
PDXDC1-218ENST00000627450 TOB1P50616 345 aaPredicted RBP15.53■□□□□ 0.08
PDXDC1-218ENST00000627450 NAPAP54920 295 aa15.53■□□□□ 0.08
PDXDC1-218ENST00000627450 FMR1Q06787 632 aaKnown RBP eCLIP15.53■□□□□ 0.085e-6■□□□□ 10.1
PDXDC1-218ENST00000627450 TMEM87AQ8NBN3 555 aa15.53■□□□□ 0.08
PDXDC1-218ENST00000627450 GMCL1Q96IK5 515 aa15.53■□□□□ 0.08
PDXDC1-218ENST00000627450 FOXP1Q9H334 677 aaPredicted RBP15.53■□□□□ 0.08
PDXDC1-218ENST00000627450 USP2O75604 605 aaPredicted RBP15.52■□□□□ 0.08
PDXDC1-218ENST00000627450 SUPT20HL1Q3ZLR7 823 aa15.52■□□□□ 0.08
PDXDC1-218ENST00000627450 PGBD1Q96JS3 809 aa15.52■□□□□ 0.08
PDXDC1-218ENST00000627450 SCAND2PQ9GZW5 306 aaPredicted RBP15.52■□□□□ 0.08
PDXDC1-218ENST00000627450 VCPKMTQ9H867 229 aa15.52■□□□□ 0.08
PDXDC1-218ENST00000627450 GOPCQ9HD26 462 aa15.52■□□□□ 0.08
PDXDC1-218ENST00000627450 FBXO28Q9NVF7 368 aa15.52■□□□□ 0.08
PDXDC1-218ENST00000627450 ZNF112Q9UJU3 913 aa15.52■□□□□ 0.08
PDXDC1-218ENST00000627450 CFAP45Q9UL16 551 aa15.52■□□□□ 0.08
PDXDC1-218ENST00000627450 PPP2R3BQ9Y5P8 575 aa15.52■□□□□ 0.08
PDXDC1-218ENST00000627450 ZC3H4Q9UPT8 1303 aaKnown RBP15.52■□□□□ 0.08
PDXDC1-218ENST00000627450 WNT7AO00755 349 aa15.52■□□□□ 0.07
PDXDC1-218ENST00000627450 SMARCA1P28370 1054 aa15.52■□□□□ 0.07
PDXDC1-218ENST00000627450 SPP2Q13103 211 aa15.52■□□□□ 0.07
PDXDC1-218ENST00000627450 MTMR2Q13614 643 aa15.52■□□□□ 0.07
PDXDC1-218ENST00000627450 ZNF396Q96N95 335 aaPredicted RBP15.52■□□□□ 0.07
PDXDC1-218ENST00000627450 TRIM75PA6NK02 468 aa15.51■□□□□ 0.07
PDXDC1-218ENST00000627450 SF3A1Q15459 793 aaKnown RBP15.51■□□□□ 0.07
PDXDC1-218ENST00000627450 CAVIN1Q6NZI2 390 aaKnown RBP15.51■□□□□ 0.07
PDXDC1-218ENST00000627450 SCYL3Q8IZE3 742 aa15.51■□□□□ 0.07
PDXDC1-218ENST00000627450 ZNF526Q8TF50 670 aaPredicted RBP15.51■□□□□ 0.07
PDXDC1-218ENST00000627450 CLEC11AQ9Y240 323 aa15.51■□□□□ 0.07
PDXDC1-218ENST00000627450 ZHX2Q9Y6X8 837 aa15.51■□□□□ 0.07
PDXDC1-218ENST00000627450 PTPRAP18433 802 aa15.51■□□□□ 0.07
PDXDC1-218ENST00000627450 QRICH1Q2TAL8 776 aa15.51■□□□□ 0.07
PDXDC1-218ENST00000627450 PIK3AP1Q6ZUJ8 805 aa15.51■□□□□ 0.07
PDXDC1-218ENST00000627450 PNMA6FA0A0J9YX94 578 aa15.51■□□□□ 0.07
PDXDC1-218ENST00000627450 IQCA1LA6NCM1 817 aa15.51■□□□□ 0.07
PDXDC1-218ENST00000627450 ZBTB5O15062 677 aa15.51■□□□□ 0.07
PDXDC1-218ENST00000627450 KLHL40Q2TBA0 621 aa15.51■□□□□ 0.07
PDXDC1-218ENST00000627450 MAP1SQ66K74 1059 aaPredicted RBP15.51■□□□□ 0.07
PDXDC1-218ENST00000627450 CNKSR2Q8WXI2 1034 aa15.51■□□□□ 0.07
PDXDC1-218ENST00000627450 TNFRSF25Q93038 417 aa15.51■□□□□ 0.07
PDXDC1-218ENST00000627450 SMCO2A6NFE2 343 aa15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 MARCKSP29966 332 aaPredicted RBP15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 CDC37Q16543 378 aaPredicted RBP15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 ANO1Q5XXA6 986 aa15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 BLIDQ8IZY5 108 aa15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 LINC00301Q8NCQ3 95 aa15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 RGS22Q8NE09 1264 aa15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 KIFC2Q96AC6 838 aa15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 CDCA5Q96FF9 252 aa15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 RRAGCQ9HB90 399 aa15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 PICK1Q9NRD5 415 aa15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 RCOR1Q9UKL0 485 aa15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 PCDHA4Q9UN74 947 aa15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 PCDHB6Q9Y5E3 794 aa15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 STAT2P52630 851 aa15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 UBE2HP62256 183 aa15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 SYDE2Q5VT97 1194 aa15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 HOOK2Q96ED9 719 aa15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 MTMR8Q96EF0 704 aa15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 BRMS1Q9HCU9 246 aa15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 SH3GLB2Q9NR46 395 aa15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 RTEL1Q9NZ71 1219 aa15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 PRR12Q9ULL5 1215 aa15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 MRVI1Q9Y6F6 885 aa15.5■□□□□ 0.07
PDXDC1-218ENST00000627450 DOCK1Q14185 1865 aa15.49■□□□□ 0.07
PDXDC1-218ENST00000627450 SCN4AP35499 1836 aa15.49■□□□□ 0.07
PDXDC1-218ENST00000627450 TRAF5O00463 557 aa15.49■□□□□ 0.07
PDXDC1-218ENST00000627450 VGLL4Q14135 290 aa15.49■□□□□ 0.07
PDXDC1-218ENST00000627450 STK38Q15208 465 aa15.49■□□□□ 0.07
PDXDC1-218ENST00000627450 USH1GQ495M9 461 aa15.49■□□□□ 0.07
PDXDC1-218ENST00000627450 POLR3EQ9NVU0 708 aa15.49■□□□□ 0.07
PDXDC1-218ENST00000627450 ME1P48163 572 aa15.49■□□□□ 0.07
PDXDC1-218ENST00000627450 SKOR2Q2VWA4 1001 aaPredicted RBP15.49■□□□□ 0.07
PDXDC1-218ENST00000627450 ZC3H15Q8WU90 426 aaKnown RBP15.49■□□□□ 0.07
PDXDC1-218ENST00000627450 ZMYND12Q9H0C1 365 aa15.49■□□□□ 0.07
PDXDC1-218ENST00000627450 SH2D4AQ9H788 454 aa15.49■□□□□ 0.07
PDXDC1-218ENST00000627450 EMILIN3Q9NT22 766 aa15.49■□□□□ 0.07
PDXDC1-218ENST00000627450 TMEM63CQ9P1W3 806 aa15.49■□□□□ 0.07
PDXDC1-218ENST00000627450 ELP1O95163 1332 aa15.48■□□□□ 0.07
PDXDC1-218ENST00000627450 PTMSP20962 102 aa15.48■□□□□ 0.07
PDXDC1-218ENST00000627450 CCDC148Q8NFR7 591 aa15.48■□□□□ 0.07
PDXDC1-218ENST00000627450 BIN2Q9UBW5 565 aaPredicted RBP15.48■□□□□ 0.07
PDXDC1-218ENST00000627450 PCDHA6Q9UN73 950 aa15.48■□□□□ 0.07
PDXDC1-218ENST00000627450 PCDHA8Q9Y5H6 950 aa15.48■□□□□ 0.07
PDXDC1-218ENST00000627450 M0R2N6 131 aa15.48■□□□□ 0.07
PDXDC1-218ENST00000627450 PPP1R12BO60237 982 aaPredicted RBP15.48■□□□□ 0.07
PDXDC1-218ENST00000627450 CALML3P27482 149 aa15.48■□□□□ 0.07
PDXDC1-218ENST00000627450 TTLL12Q14166 644 aaPredicted RBP15.48■□□□□ 0.07
PDXDC1-218ENST00000627450 CSPP1Q1MSJ5 1256 aa15.48■□□□□ 0.07
PDXDC1-218ENST00000627450 ZNF280CQ8ND82 737 aa15.48■□□□□ 0.07
PDXDC1-218ENST00000627450 CLMNQ96JQ2 1002 aa15.48■□□□□ 0.07
PDXDC1-218ENST00000627450 KIAA1683Q9H0B3 1180 aa15.48■□□□□ 0.07
PDXDC1-218ENST00000627450 TMEM260Q9NX78 707 aa15.48■□□□□ 0.07
PDXDC1-218ENST00000627450 SYNPO2Q9UMS6 1093 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms