RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 HAND2P61296 217 aa26.38■■□□□ 1.81
SF1-220ENST00000626028 OLFML2BQ68BL8 750 aa26.38■■□□□ 1.81
SF1-220ENST00000626028 DPP9Q86TI2 863 aa26.38■■□□□ 1.81
SF1-220ENST00000626028 ZBED4O75132 1171 aa26.37■■□□□ 1.81
SF1-220ENST00000626028 TOP1P11387 765 aaKnown RBP26.37■■□□□ 1.81
SF1-220ENST00000626028 PRKAR2AP13861 404 aaKnown RBP26.37■■□□□ 1.81
SF1-220ENST00000626028 CHMLP26374 656 aa26.37■■□□□ 1.81
SF1-220ENST00000626028 CCDC178Q5BJE1 867 aa26.37■■□□□ 1.81
SF1-220ENST00000626028 RRP12Q5JTH9 1297 aaKnown RBP26.37■■□□□ 1.81
SF1-220ENST00000626028 MFSD14CQ5VZR4 134 aa26.37■■□□□ 1.81
SF1-220ENST00000626028 RCSD1Q6JBY9 416 aa26.37■■□□□ 1.81
SF1-220ENST00000626028 SAMD1Q6SPF0 538 aaPredicted RBP26.37■■□□□ 1.81
SF1-220ENST00000626028 DEFB118Q96PH6 123 aa26.37■■□□□ 1.81
SF1-220ENST00000626028 SLC38A10Q9HBR0 1119 aa26.37■■□□□ 1.81
SF1-220ENST00000626028 NMT2O60551 498 aa26.36■■□□□ 1.81
SF1-220ENST00000626028 IGHA2P01877 340 aa26.36■■□□□ 1.81
SF1-220ENST00000626028 UBE2Q1Q7Z7E8 422 aa26.36■■□□□ 1.81
SF1-220ENST00000626028 TBC1D10CQ8IV04 446 aa26.36■■□□□ 1.81
SF1-220ENST00000626028 ANKLE1Q8NAG6 615 aa26.36■■□□□ 1.81
SF1-220ENST00000626028 CTDP1Q9Y5B0 961 aaPredicted RBP26.36■■□□□ 1.81
SF1-220ENST00000626028 TFRCP02786 760 aaKnown RBP26.35■■□□□ 1.81
SF1-220ENST00000626028 CACNB2Q08289 660 aaPredicted RBP26.35■■□□□ 1.81
SF1-220ENST00000626028 CCL14Q16627 93 aa26.35■■□□□ 1.81
SF1-220ENST00000626028 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.35■■□□□ 1.812e-12■□□□□ 10.2
SF1-220ENST00000626028 DCAF4Q8WV16 495 aa26.35■■□□□ 1.81
SF1-220ENST00000626028 CNNM2Q9H8M5 875 aa26.35■■□□□ 1.81
SF1-220ENST00000626028 TRIM32Q13049 653 aa26.34■■□□□ 1.81
SF1-220ENST00000626028 KCTD2Q14681 263 aa26.34■■□□□ 1.81
SF1-220ENST00000626028 PRPF38BQ5VTL8 546 aaKnown RBP26.34■■□□□ 1.81
SF1-220ENST00000626028 KIFC2Q96AC6 838 aa26.34■■□□□ 1.81
SF1-220ENST00000626028 DIS3Q9Y2L1 958 aaKnown RBP26.34■■□□□ 1.81
SF1-220ENST00000626028 TMEM232C9JQI7 657 aa26.33■■□□□ 1.81
SF1-220ENST00000626028 MCCP23508 829 aa26.33■■□□□ 1.81
SF1-220ENST00000626028 IQCA1Q86XH1 822 aa26.33■■□□□ 1.81
SF1-220ENST00000626028 DGKHQ86XP1 1220 aa26.33■■□□□ 1.81
SF1-220ENST00000626028 NPLOC4Q8TAT6 608 aa26.33■■□□□ 1.81
SF1-220ENST00000626028 KRT23Q9C075 422 aa26.33■■□□□ 1.81
SF1-220ENST00000626028 FBXO40Q9UH90 709 aa26.33■■□□□ 1.81
SF1-220ENST00000626028 MSCO60682 206 aa26.32■■□□□ 1.8
SF1-220ENST00000626028 FARP2O94887 1054 aaPredicted RBP26.32■■□□□ 1.8
SF1-220ENST00000626028 SNRNP48Q6IEG0 339 aaKnown RBP26.32■■□□□ 1.8
SF1-220ENST00000626028 MMP19Q99542 508 aa26.32■■□□□ 1.8
SF1-220ENST00000626028 TMEM47Q9BQJ4 181 aa26.32■■□□□ 1.8
SF1-220ENST00000626028 SGSM2O43147 1006 aa26.31■■□□□ 1.8
SF1-220ENST00000626028 COBLO75128 1261 aa26.31■■□□□ 1.8
SF1-220ENST00000626028 HTATIP2Q9BUP3 242 aa26.31■■□□□ 1.8
SF1-220ENST00000626028 IL25Q9H293 177 aa26.31■■□□□ 1.8
SF1-220ENST00000626028 FLRT1Q9NZU1 646 aa26.31■■□□□ 1.8
SF1-220ENST00000626028 OGDHLQ9ULD0 1010 aa26.31■■□□□ 1.8
SF1-220ENST00000626028 NEDD4P46934 1319 aa26.31■■□□□ 1.8
SF1-220ENST00000626028 CHST13Q8NET6 341 aa26.3■■□□□ 1.8
SF1-220ENST00000626028 ANKS1AQ92625 1134 aa26.3■■□□□ 1.8
SF1-220ENST00000626028 U3KPZ7 1027 aaPredicted RBP26.3■■□□□ 1.8
SF1-220ENST00000626028 IKQ13123 557 aaPredicted RBP26.29■■□□□ 1.8
SF1-220ENST00000626028 BTNL9Q6UXG8 535 aa26.29■■□□□ 1.8
SF1-220ENST00000626028 MAML3Q96JK9 1138 aa26.29■■□□□ 1.8
SF1-220ENST00000626028 NRBP1Q9UHY1 535 aa26.29■■□□□ 1.8
SF1-220ENST00000626028 ISY1Q9ULR0 285 aaKnown RBP26.29■■□□□ 1.8
SF1-220ENST00000626028 MYH6P13533 1939 aa26.28■■□□□ 1.8
SF1-220ENST00000626028 SMCHD1A6NHR9 2005 aa26.28■■□□□ 1.8
SF1-220ENST00000626028 KDM4AO75164 1064 aa26.28■■□□□ 1.8
SF1-220ENST00000626028 TKFCQ3LXA3 575 aa26.28■■□□□ 1.8
SF1-220ENST00000626028 BMP2KLQ5H9B9 411 aa26.28■■□□□ 1.8
SF1-220ENST00000626028 CPXCR1Q8N123 301 aa26.28■■□□□ 1.8
SF1-220ENST00000626028 MSL3Q8N5Y2 521 aaKnown RBP26.28■■□□□ 1.8
SF1-220ENST00000626028 PNMA2Q9UL42 364 aa26.28■■□□□ 1.8
SF1-220ENST00000626028 CEP290O15078 2479 aa26.27■■□□□ 1.8
SF1-220ENST00000626028 KCTD1Q719H9 257 aa26.27■■□□□ 1.8
SF1-220ENST00000626028 RAVER2Q9HCJ3 691 aaKnown RBP26.27■■□□□ 1.8
SF1-220ENST00000626028 SNHG28P0DPA3 235 aa26.26■■□□□ 1.79
SF1-220ENST00000626028 PDHBP11177 359 aa26.26■■□□□ 1.79
SF1-220ENST00000626028 CYBAP13498 195 aa26.26■■□□□ 1.79
SF1-220ENST00000626028 CCND3P30281 292 aaPredicted RBP26.26■■□□□ 1.79
SF1-220ENST00000626028 CYP2C19P33261 490 aa26.26■■□□□ 1.79
SF1-220ENST00000626028 CCDC96Q2M329 555 aa26.26■■□□□ 1.79
SF1-220ENST00000626028 ZNF792Q3KQV3 632 aa26.26■■□□□ 1.79
SF1-220ENST00000626028 GPATCH4Q5T3I0 446 aaKnown RBP26.26■■□□□ 1.79
SF1-220ENST00000626028 LHX8Q68G74 356 aa26.26■■□□□ 1.79
SF1-220ENST00000626028 NECAB2Q7Z6G3 386 aa26.26■■□□□ 1.79
SF1-220ENST00000626028 ZSWIM5Q9P217 1185 aa26.26■■□□□ 1.79
SF1-220ENST00000626028 PRR12Q9ULL5 1215 aa26.26■■□□□ 1.79
SF1-220ENST00000626028 RIPK3Q9Y572 518 aa26.26■■□□□ 1.79
SF1-220ENST00000626028 MCM3APO60318 1980 aa26.26■■□□□ 1.79
SF1-220ENST00000626028 DNAJC25-GNG10A0A024R161 153 aa26.25■■□□□ 1.79
SF1-220ENST00000626028 B4E1Z4 1266 aa26.25■■□□□ 1.79
SF1-220ENST00000626028 TRDNQ13061 729 aa26.25■■□□□ 1.79
SF1-220ENST00000626028 ZNF467Q7Z7K2 595 aaPredicted RBP26.25■■□□□ 1.79
SF1-220ENST00000626028 MAP4K1Q92918 833 aa26.25■■□□□ 1.79
SF1-220ENST00000626028 DDX11Q96FC9 970 aa26.25■■□□□ 1.79
SF1-220ENST00000626028 ZSCAN10Q96SZ4 725 aaPredicted RBP26.25■■□□□ 1.79
SF1-220ENST00000626028 DDX20Q9UHI6 824 aaKnown RBP26.25■■□□□ 1.79
SF1-220ENST00000626028 ALPK3Q96L96 1907 aa26.24■■□□□ 1.79
SF1-220ENST00000626028 KIAA1211Q6ZU35 1233 aa26.24■■□□□ 1.79
SF1-220ENST00000626028 CCDC136Q96JN2 1154 aa26.24■■□□□ 1.79
SF1-220ENST00000626028 ZNF536O15090 1300 aa26.23■■□□□ 1.79
SF1-220ENST00000626028 PTH1RQ03431 593 aa26.23■■□□□ 1.79
SF1-220ENST00000626028 ZNF543Q08ER8 600 aa26.23■■□□□ 1.79
SF1-220ENST00000626028 TINF2Q9BSI4 451 aa26.23■■□□□ 1.79
SF1-220ENST00000626028 UBAC1Q9BSL1 405 aa26.23■■□□□ 1.79
SF1-220ENST00000626028 RANBP17Q9H2T7 1088 aaKnown RBP26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms