RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 UBL4BQ8N7F7 174 aa12.25□□□□□ -0.45
VPS8-227ENST00000625842 N4BP2L2Q92802 583 aaPredicted RBP12.25□□□□□ -0.45
VPS8-227ENST00000625842 VWA3AA6NCI4 1184 aa12.25□□□□□ -0.45
VPS8-227ENST00000625842 CREB3L3Q68CJ9 461 aa12.25□□□□□ -0.45
VPS8-227ENST00000625842 ZNF594Q96JF6 807 aaPredicted RBP12.25□□□□□ -0.45
VPS8-227ENST00000625842 TBC1D2Q9BYX2 928 aa12.25□□□□□ -0.45
VPS8-227ENST00000625842 EDEM3Q9BZQ6 932 aa12.25□□□□□ -0.45
VPS8-227ENST00000625842 ST7Q9NRC1 585 aa12.25□□□□□ -0.45
VPS8-227ENST00000625842 USP17L10C9JJH3 530 aa12.25□□□□□ -0.45
VPS8-227ENST00000625842 RPLP2P05387 115 aaKnown RBP12.25□□□□□ -0.45
VPS8-227ENST00000625842 ARRDC4Q8NCT1 418 aa12.25□□□□□ -0.45
VPS8-227ENST00000625842 PNMA1Q8ND90 353 aa12.25□□□□□ -0.45
VPS8-227ENST00000625842 APOL6Q9BWW8 343 aa12.25□□□□□ -0.45
VPS8-227ENST00000625842 KDM5DQ9BY66 1539 aa12.25□□□□□ -0.45
VPS8-227ENST00000625842 CIAO1O76071 339 aa12.25□□□□□ -0.45
VPS8-227ENST00000625842 PSMC4P43686 418 aa12.25□□□□□ -0.45
VPS8-227ENST00000625842 POLA2Q14181 598 aa12.25□□□□□ -0.45
VPS8-227ENST00000625842 LRRC2Q9BYS8 371 aa12.25□□□□□ -0.45
VPS8-227ENST00000625842 NSRP1Q9H0G5 558 aaKnown RBP12.25□□□□□ -0.45
VPS8-227ENST00000625842 FEZ2Q9UHY8 353 aaPredicted RBP12.25□□□□□ -0.45
VPS8-227ENST00000625842 TRAPPC3O43617 180 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 ITIH3Q06033 890 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 PPP1R7Q15435 360 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 DSTYKQ6XUX3 929 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 MAEAQ7L5Y9 396 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 CATSPER4Q7RTX7 472 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 TSGA10Q9BZW7 698 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 PCDHA12Q9UN75 941 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 ERBB3P21860 1342 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 TMEM110-MUSTN1A8MSY1 372 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 DCDC2CA8MYV0 355 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 KLRF2D3W0D1 207 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 TUBB4AP04350 444 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 NOLC1Q14978 699 aaKnown RBP eCLIP12.24□□□□□ -0.45
VPS8-227ENST00000625842 PDCL2Q8N4E4 241 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 MAP3K20Q9NYL2 800 aaKnown RBP12.24□□□□□ -0.45
VPS8-227ENST00000625842 SUGT1Q9Y2Z0 365 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 USP17L15C9J2P7 530 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 USP17L13C9JLJ4 530 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 USP17L11C9JVI0 530 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 USP17L18D6R9N7 530 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 USP17L22D6RA61 530 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 USP17L17D6RBQ6 530 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 USP17L19D6RCP7 530 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 USP17L20D6RJB6 530 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 USP17L24Q0WX57 530 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 ZNF174Q15697 407 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 PRR16Q569H4 304 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 GPR108Q9NPR9 543 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 ATG3Q9NT62 314 aa12.24□□□□□ -0.45
VPS8-227ENST00000625842 SEPT9Q9UHD8 586 aaPredicted RBP12.24□□□□□ -0.45
VPS8-227ENST00000625842 ZAP70P43403 619 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 ZNF165P49910 485 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 ARPP19P56211 112 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 TSPY1Q01534 308 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 TRIM14Q14142 442 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 KRT33BQ14525 404 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 ZNF365Q70YC5 407 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 RNF180Q86T96 592 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 MAP7D3Q8IWC1 876 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 PRPF38AQ8NAV1 312 aaKnown RBP12.23□□□□□ -0.45
VPS8-227ENST00000625842 DCTPP1Q9H773 170 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 ANAPC5Q9UJX4 755 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 LUC7L2Q9Y383 392 aaKnown RBP12.23□□□□□ -0.45
VPS8-227ENST00000625842 A0A1B0GVL5 298 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 UBASH3AP57075 661 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 LACTBP83111 547 aaPredicted RBP12.23□□□□□ -0.45
VPS8-227ENST00000625842 PRPSAP1Q14558 356 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 UBE3CQ15386 1083 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 HTATIP2Q9BUP3 242 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.23□□□□□ -0.45
VPS8-227ENST00000625842 ECE2O60344 883 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 NUCB1Q02818 461 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 TNFAIP2Q03169 654 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 HAUS6Q7Z4H7 955 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 TTC30AQ86WT1 665 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 SP8Q8IXZ3 490 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 OTUD5Q96G74 571 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 MMP19Q99542 508 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 DSCC1Q9BVC3 393 aa12.23□□□□□ -0.45
VPS8-227ENST00000625842 EIF2B5Q13144 721 aaKnown RBP12.23□□□□□ -0.45
VPS8-227ENST00000625842 ZSCAN22P10073 491 aaPredicted RBP12.22□□□□□ -0.45
VPS8-227ENST00000625842 ATP5JP18859 108 aa12.22□□□□□ -0.45
VPS8-227ENST00000625842 HOXA7P31268 230 aaPredicted RBP12.22□□□□□ -0.45
VPS8-227ENST00000625842 IFRD2Q12894 506 aaPredicted RBP12.22□□□□□ -0.45
VPS8-227ENST00000625842 SDE2Q6IQ49 451 aa12.22□□□□□ -0.45
VPS8-227ENST00000625842 FAM178BQ8IXR5 827 aa12.22□□□□□ -0.45
VPS8-227ENST00000625842 EFHBQ8N7U6 833 aa12.22□□□□□ -0.45
VPS8-227ENST00000625842 ZSCAN10Q96SZ4 725 aaPredicted RBP12.22□□□□□ -0.45
VPS8-227ENST00000625842 TRIM7Q9C029 511 aa12.22□□□□□ -0.45
VPS8-227ENST00000625842 BCCIPQ9P287 314 aaKnown RBP eCLIP12.22□□□□□ -0.45
VPS8-227ENST00000625842 CCDC66A2RUB6 948 aa12.22□□□□□ -0.45
VPS8-227ENST00000625842 C19orf81C9J6K1 198 aa12.22□□□□□ -0.45
VPS8-227ENST00000625842 CELF2O95319 508 aaKnown RBP12.22□□□□□ -0.45
VPS8-227ENST00000625842 RAD51Q06609 339 aa12.22□□□□□ -0.45
VPS8-227ENST00000625842 CEP85Q6P2H3 762 aa12.22□□□□□ -0.45
VPS8-227ENST00000625842 ERO1AQ96HE7 468 aa12.22□□□□□ -0.45
VPS8-227ENST00000625842 NUP58Q9BVL2 599 aa12.22□□□□□ -0.45
VPS8-227ENST00000625842 METTL14Q9HCE5 456 aaKnown RBP12.22□□□□□ -0.45
VPS8-227ENST00000625842 FEM1BQ9UK73 627 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms