RNA–Protein interactions for RNA: ENST00000625364.1

PPA1-206, Transcript of pyrophosphatase (inorganic) 1, human

TSL 5 BASIC

Gene PPA1, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPA1-206	ENST00000625364	DCP1A	Q9NPI6	582 aa	Predicted RBP	17.42	■□□□□ 0.38
PPA1-206	ENST00000625364	FBXO28	Q9NVF7	368 aa		17.42	■□□□□ 0.38
PPA1-206	ENST00000625364	NOP58	Q9Y2X3	529 aa	Known RBP	17.42	■□□□□ 0.38
PPA1-206	ENST00000625364	BAZ2A	Q9UIF9	1905 aa	Known RBP	17.42	■□□□□ 0.38
PPA1-206	ENST00000625364	SYNGAP1	Q96PV0	1343 aa		17.42	■□□□□ 0.38
PPA1-206	ENST00000625364		A0A0U1RQG5	324 aa	Predicted RBP	17.41	■□□□□ 0.38
PPA1-206	ENST00000625364	VWA5A	O00534	786 aa		17.41	■□□□□ 0.38
PPA1-206	ENST00000625364	DUSP11	O75319	330 aa	Known RBP	17.41	■□□□□ 0.38
PPA1-206	ENST00000625364	C6orf222	P0C671	652 aa	Predicted RBP	17.41	■□□□□ 0.38
PPA1-206	ENST00000625364	PDE6A	P16499	860 aa		17.41	■□□□□ 0.38
PPA1-206	ENST00000625364	CST5	P28325	142 aa	Predicted RBP	17.41	■□□□□ 0.38
PPA1-206	ENST00000625364	CDK7	P50613	346 aa		17.41	■□□□□ 0.38
PPA1-206	ENST00000625364	PCSK9	Q8NBP7	692 aa	Known RBP	17.41	■□□□□ 0.38
PPA1-206	ENST00000625364	VTI1A	Q96AJ9	217 aa		17.41	■□□□□ 0.38
PPA1-206	ENST00000625364	DYNLL2	Q96FJ2	89 aa		17.41	■□□□□ 0.38
PPA1-206	ENST00000625364	NECAB3	Q96P71	396 aa	Predicted RBP	17.41	■□□□□ 0.38
PPA1-206	ENST00000625364	C1QTNF1	Q9BXJ1	281 aa		17.41	■□□□□ 0.38
PPA1-206	ENST00000625364	TSPYL2	Q9H2G4	693 aa	Predicted RBP	17.41	■□□□□ 0.38
PPA1-206	ENST00000625364	MTIF3	Q9H2K0	278 aa	Known RBP	17.41	■□□□□ 0.38
PPA1-206	ENST00000625364	NKX2-4	Q9H2Z4	354 aa		17.41	■□□□□ 0.38
PPA1-206	ENST00000625364	C1orf115	Q9H7X2	142 aa		17.41	■□□□□ 0.38
PPA1-206	ENST00000625364	CXXC1	Q9P0U4	656 aa	Predicted RBP	17.41	■□□□□ 0.38
PPA1-206	ENST00000625364	ZNF214	Q9UL59	606 aa	Predicted RBP	17.41	■□□□□ 0.38
PPA1-206	ENST00000625364	PPP1R9A	Q9ULJ8	1098 aa		17.41	■□□□□ 0.38
PPA1-206	ENST00000625364	PRRC2B	Q5JSZ5	2229 aa	Known RBP	17.41	■□□□□ 0.38
PPA1-206	ENST00000625364	ARVCF	O00192	962 aa		17.4	■□□□□ 0.38
PPA1-206	ENST00000625364	TLR3	O15455	904 aa	Known RBP	17.4	■□□□□ 0.38
PPA1-206	ENST00000625364	SNAI1	O95863	264 aa	Predicted RBP	17.4	■□□□□ 0.38
PPA1-206	ENST00000625364	ASGR1	P07306	291 aa		17.4	■□□□□ 0.38
PPA1-206	ENST00000625364	HOXD11	P31277	338 aa	Predicted RBP	17.4	■□□□□ 0.38
PPA1-206	ENST00000625364	SLC9C2	Q5TAH2	1124 aa		17.4	■□□□□ 0.38
PPA1-206	ENST00000625364	HERVK_113	Q902F9	699 aa		17.4	■□□□□ 0.38
PPA1-206	ENST00000625364	SLC28A3	Q9HAS3	691 aa		17.4	■□□□□ 0.38
PPA1-206	ENST00000625364	TTF1	Q15361	905 aa	Predicted RBP	17.39	■□□□□ 0.37
PPA1-206	ENST00000625364	FAM126B	Q8IXS8	530 aa		17.39	■□□□□ 0.37
PPA1-206	ENST00000625364	MICALL1	Q8N3F8	863 aa		17.39	■□□□□ 0.37
PPA1-206	ENST00000625364	LCORL	Q8N3X6	602 aa		17.39	■□□□□ 0.37
PPA1-206	ENST00000625364	TMEM57	Q8N5G2	664 aa		17.39	■□□□□ 0.37
PPA1-206	ENST00000625364	REPS2	Q8NFH8	660 aa		17.39	■□□□□ 0.37
PPA1-206	ENST00000625364	CCDC17	Q96LX7	622 aa		17.39	■□□□□ 0.37
PPA1-206	ENST00000625364	SPC25	Q9HBM1	224 aa		17.39	■□□□□ 0.37
PPA1-206	ENST00000625364	IL23A	Q9NPF7	189 aa		17.39	■□□□□ 0.37
PPA1-206	ENST00000625364	YBX2	Q9Y2T7	364 aa	Known RBP	17.39	■□□□□ 0.37
PPA1-206	ENST00000625364	MUC6	Q6W4X9	2439 aa		17.39	■□□□□ 0.37
PPA1-206	ENST00000625364	RAD21	O60216	631 aa		17.38	■□□□□ 0.37
PPA1-206	ENST00000625364	EEF2	P13639	858 aa	Known RBP	17.38	■□□□□ 0.37
PPA1-206	ENST00000625364	IRX5	P78411	483 aa	Predicted RBP	17.38	■□□□□ 0.37
PPA1-206	ENST00000625364	MAMDC4	Q6UXC1	1216 aa		17.38	■□□□□ 0.37
PPA1-206	ENST00000625364	AACS	Q86V21	672 aa		17.38	■□□□□ 0.37
PPA1-206	ENST00000625364	DDX11	Q96FC9	970 aa		17.38	■□□□□ 0.37
PPA1-206	ENST00000625364	GOPC	Q9HD26	462 aa		17.38	■□□□□ 0.37
PPA1-206	ENST00000625364	ZNF532	Q9HCE3	1301 aa		17.38	■□□□□ 0.37
PPA1-206	ENST00000625364	CYP2C18	P33260	490 aa		17.37	■□□□□ 0.37
PPA1-206	ENST00000625364	FAM83B	Q5T0W9	1011 aa		17.37	■□□□□ 0.37
PPA1-206	ENST00000625364	SNRNP48	Q6IEG0	339 aa	Known RBP	17.37	■□□□□ 0.37
PPA1-206	ENST00000625364	TEX13B	Q9BXU2	312 aa		17.37	■□□□□ 0.37
PPA1-206	ENST00000625364	UPF3A	Q9H1J1	476 aa	Known RBP	17.37	■□□□□ 0.37
PPA1-206	ENST00000625364	ZNF316	A6NFI3	1004 aa	Predicted RBP	17.36	■□□□□ 0.37
PPA1-206	ENST00000625364	ADCY6	O43306	1168 aa		17.36	■□□□□ 0.37
PPA1-206	ENST00000625364	FGB	P02675	491 aa		17.36	■□□□□ 0.37
PPA1-206	ENST00000625364	BMP1	P13497	986 aa		17.36	■□□□□ 0.37
PPA1-206	ENST00000625364	CDK8	P49336	464 aa		17.36	■□□□□ 0.37
PPA1-206	ENST00000625364	GJA9	P57773	515 aa		17.36	■□□□□ 0.37
PPA1-206	ENST00000625364	ACVR2B	Q13705	512 aa		17.36	■□□□□ 0.37
PPA1-206	ENST00000625364	AAK1	Q2M2I8	961 aa		17.36	■□□□□ 0.37
PPA1-206	ENST00000625364	GNAS	Q5JWF2	1037 aa		17.36	■□□□□ 0.37
PPA1-206	ENST00000625364	PPP2R2D	Q66LE6	453 aa		17.36	■□□□□ 0.37
PPA1-206	ENST00000625364	ZNF467	Q7Z7K2	595 aa	Predicted RBP	17.36	■□□□□ 0.37
PPA1-206	ENST00000625364	ARMT1	Q9H993	441 aa		17.36	■□□□□ 0.37
PPA1-206	ENST00000625364	KANSL2	Q9H9L4	492 aa		17.36	■□□□□ 0.37
PPA1-206	ENST00000625364	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	17.36	■□□□□ 0.37
PPA1-206	ENST00000625364	BRWD1	Q9NSI6	2320 aa		17.35	■□□□□ 0.37
PPA1-206	ENST00000625364	DNAJC25-GNG10	A0A024R161	153 aa		17.35	■□□□□ 0.37
PPA1-206	ENST00000625364	TCRBV5S4A2T	A0A5A2	114 aa		17.35	■□□□□ 0.37
PPA1-206	ENST00000625364	TFF2	Q03403	129 aa		17.35	■□□□□ 0.37
PPA1-206	ENST00000625364	CCDC144B	Q3MJ40	725 aa		17.35	■□□□□ 0.37
PPA1-206	ENST00000625364	AMOTL1	Q8IY63	956 aa		17.35	■□□□□ 0.37
PPA1-206	ENST00000625364	SLF1	Q9BQI6	1058 aa		17.35	■□□□□ 0.37
PPA1-206	ENST00000625364	ABHD16B	Q9H3Z7	469 aa		17.35	■□□□□ 0.37
PPA1-206	ENST00000625364	HIPK3	Q9H422	1215 aa		17.35	■□□□□ 0.37
PPA1-206	ENST00000625364	HCN4	Q9Y3Q4	1203 aa		17.35	■□□□□ 0.37
PPA1-206	ENST00000625364	CYP2D7	A0A087X1C5	515 aa		17.34	■□□□□ 0.37
PPA1-206	ENST00000625364	PRKAB2	O43741	272 aa		17.34	■□□□□ 0.37
PPA1-206	ENST00000625364	CD4	P01730	458 aa		17.34	■□□□□ 0.37
PPA1-206	ENST00000625364	KCNQ1	P51787	676 aa		17.34	■□□□□ 0.37
PPA1-206	ENST00000625364	RABGGTB	P53611	331 aa		17.34	■□□□□ 0.37
PPA1-206	ENST00000625364	SKIV2L	Q15477	1246 aa	Known RBP	17.34	■□□□□ 0.37
PPA1-206	ENST00000625364	C16orf86	Q6ZW13	317 aa		17.34	■□□□□ 0.37
PPA1-206	ENST00000625364	OTOP2	Q7RTS6	562 aa		17.34	■□□□□ 0.37
PPA1-206	ENST00000625364	ERC1	Q8IUD2	1116 aa		17.34	■□□□□ 0.37
PPA1-206	ENST00000625364	DNAJC2	Q99543	621 aa	Known RBP	17.34	■□□□□ 0.37
PPA1-206	ENST00000625364	ATP8A2	Q9NTI2	1148 aa		17.34	■□□□□ 0.37
PPA1-206	ENST00000625364	RIPK3	Q9Y572	518 aa		17.34	■□□□□ 0.37
PPA1-206	ENST00000625364	UMODL1	Q5DID0	1318 aa		17.33	■□□□□ 0.36
PPA1-206	ENST00000625364	SMIM22	K7EJ46	135 aa		17.33	■□□□□ 0.36
PPA1-206	ENST00000625364	GOLIM4	O00461	696 aa		17.33	■□□□□ 0.36
PPA1-206	ENST00000625364	MBD4	O95243	580 aa		17.33	■□□□□ 0.36
PPA1-206	ENST00000625364	SLC4A3	P48751	1232 aa		17.33	■□□□□ 0.36
PPA1-206	ENST00000625364	C12orf60	Q5U649	245 aa		17.33	■□□□□ 0.36
PPA1-206	ENST00000625364	ZKSCAN2	Q63HK3	967 aa		17.33	■□□□□ 0.36

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms