RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 DIS3Q9Y2L1 958 aaKnown RBP6.36□□□□□ -1.39
CDKL5-207ENST00000624700 CAPN6Q9Y6Q1 641 aa6.36□□□□□ -1.39
CDKL5-207ENST00000624700 IQCA1LA6NCM1 817 aa6.35□□□□□ -1.39
CDKL5-207ENST00000624700 ZNF503-AS2A6NEH8 195 aa6.35□□□□□ -1.39
CDKL5-207ENST00000624700 FAM86C2PA6NEL3 165 aa6.35□□□□□ -1.39
CDKL5-207ENST00000624700 AGRPO00253 132 aa6.35□□□□□ -1.39
CDKL5-207ENST00000624700 PPM1BO75688 479 aa6.35□□□□□ -1.39
CDKL5-207ENST00000624700 TP53P04637 393 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-207ENST00000624700 RASGRF1Q13972 1273 aa6.35□□□□□ -1.39
CDKL5-207ENST00000624700 CLEC16AQ2KHT3 1053 aa6.35□□□□□ -1.39
CDKL5-207ENST00000624700 CCDC144BQ3MJ40 725 aa6.35□□□□□ -1.39
CDKL5-207ENST00000624700 LCE4AQ5TA78 99 aa6.35□□□□□ -1.39
CDKL5-207ENST00000624700 C6orf15Q6UXA7 325 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-207ENST00000624700 CRACR2BQ8N4Y2 399 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-207ENST00000624700 MRFAP1L1Q96HT8 127 aa6.35□□□□□ -1.39
CDKL5-207ENST00000624700 ZSWIM4Q9H7M6 989 aa6.35□□□□□ -1.39
CDKL5-207ENST00000624700 ST7Q9NRC1 585 aa6.35□□□□□ -1.39
CDKL5-207ENST00000624700 WHRNQ9P202 907 aa6.35□□□□□ -1.39
CDKL5-207ENST00000624700 CTNND2Q9UQB3 1225 aa6.35□□□□□ -1.39
CDKL5-207ENST00000624700 MSRB2Q9Y3D2 182 aa6.35□□□□□ -1.39
CDKL5-207ENST00000624700 PDPK1O15530 556 aa6.34□□□□□ -1.39
CDKL5-207ENST00000624700 GJB6O95452 261 aa6.34□□□□□ -1.39
CDKL5-207ENST00000624700 ITGA4P13612 1032 aa6.34□□□□□ -1.39
CDKL5-207ENST00000624700 CD247P20963 164 aa6.34□□□□□ -1.39
CDKL5-207ENST00000624700 AFMP43652 599 aa6.34□□□□□ -1.39
CDKL5-207ENST00000624700 TNK2Q07912 1038 aa6.34□□□□□ -1.39
CDKL5-207ENST00000624700 IFRD2Q12894 506 aaPredicted RBP6.34□□□□□ -1.39
CDKL5-207ENST00000624700 MLANAQ16655 118 aa6.34□□□□□ -1.39
CDKL5-207ENST00000624700 NKPD1Q17RQ9 610 aa6.34□□□□□ -1.39
CDKL5-207ENST00000624700 KRTAP19-4Q3LI73 84 aa6.34□□□□□ -1.39
CDKL5-207ENST00000624700 AXDND1Q5T1B0 1012 aaPredicted RBP6.34□□□□□ -1.39
CDKL5-207ENST00000624700 ZNF655Q8N720 491 aaPredicted RBP6.34□□□□□ -1.39
CDKL5-207ENST00000624700 DAGLBQ8NCG7 672 aa6.34□□□□□ -1.39
CDKL5-207ENST00000624700 KLHL6Q8WZ60 621 aa6.34□□□□□ -1.39
CDKL5-207ENST00000624700 RCC1LQ96I51 464 aaKnown RBP6.34□□□□□ -1.39
CDKL5-207ENST00000624700 Q96M66 194 aa6.34□□□□□ -1.39
CDKL5-207ENST00000624700 SRPK1Q96SB4 655 aaKnown RBP6.34□□□□□ -1.39
CDKL5-207ENST00000624700 HAUS7Q99871 368 aa6.34□□□□□ -1.39
CDKL5-207ENST00000624700 LMCD1Q9NZU5 365 aa6.34□□□□□ -1.39
CDKL5-207ENST00000624700 PCDHB10Q9UN67 800 aa6.34□□□□□ -1.39
CDKL5-207ENST00000624700 SF3B6Q9Y3B4 125 aaKnown RBP6.34□□□□□ -1.39
CDKL5-207ENST00000624700 PITPNM2Q9BZ72 1349 aa6.33□□□□□ -1.4
CDKL5-207ENST00000624700 CNTNAP4Q9C0A0 1308 aa6.33□□□□□ -1.4
CDKL5-207ENST00000624700 C9IYK1 514 aa6.33□□□□□ -1.4
CDKL5-207ENST00000624700 SIGLEC6O43699 453 aa6.33□□□□□ -1.4
CDKL5-207ENST00000624700 SRFP11831 508 aa6.33□□□□□ -1.4
CDKL5-207ENST00000624700 NMIQ13287 307 aaPredicted RBP6.33□□□□□ -1.4
CDKL5-207ENST00000624700 POMZP3Q6PJE2 187 aa6.33□□□□□ -1.4
CDKL5-207ENST00000624700 TMPRSS7Q7RTY8 843 aa6.33□□□□□ -1.4
CDKL5-207ENST00000624700 ADAT2Q7Z6V5 191 aaKnown RBP6.33□□□□□ -1.4
CDKL5-207ENST00000624700 CELF2-AS1Q8N7Q2 184 aa6.33□□□□□ -1.4
CDKL5-207ENST00000624700 SYTL5Q8TDW5 730 aaPredicted RBP6.33□□□□□ -1.4
CDKL5-207ENST00000624700 SGSM3Q96HU1 749 aa6.33□□□□□ -1.4
CDKL5-207ENST00000624700 NOP56O00567 594 aaKnown RBP6.32□□□□□ -1.4
CDKL5-207ENST00000624700 IGSF3O75054 1194 aa6.32□□□□□ -1.4
CDKL5-207ENST00000624700 LRRN2O75325 713 aa6.32□□□□□ -1.4
CDKL5-207ENST00000624700 ENDOUP21128 410 aaKnown RBP6.32□□□□□ -1.4
CDKL5-207ENST00000624700 NOP2P46087 812 aaKnown RBP6.32□□□□□ -1.4
CDKL5-207ENST00000624700 PPFIBP1Q86W92 1011 aa6.32□□□□□ -1.4
CDKL5-207ENST00000624700 LIN37Q96GY3 246 aaPredicted RBP6.32□□□□□ -1.4
CDKL5-207ENST00000624700 ZNF512BQ96KM6 892 aaPredicted RBP6.32□□□□□ -1.4
CDKL5-207ENST00000624700 DEPDC7Q96QD5 511 aa6.32□□□□□ -1.4
CDKL5-207ENST00000624700 PRDM14Q9GZV8 571 aa6.32□□□□□ -1.4
CDKL5-207ENST00000624700 KLHL25Q9H0H3 589 aa6.32□□□□□ -1.4
CDKL5-207ENST00000624700 CWC22Q9HCG8 908 aaKnown RBP6.32□□□□□ -1.4
CDKL5-207ENST00000624700 GP6Q9HCN6 339 aa6.32□□□□□ -1.4
CDKL5-207ENST00000624700 CDK11AQ9UQ88 783 aaPredicted RBP6.32□□□□□ -1.4
CDKL5-207ENST00000624700 ST14Q9Y5Y6 855 aa6.32□□□□□ -1.4
CDKL5-207ENST00000624700 FHOD1Q9Y613 1164 aa6.32□□□□□ -1.4
CDKL5-207ENST00000624700 PRR33A8MZF0 331 aa6.31□□□□□ -1.4
CDKL5-207ENST00000624700 SUSD5O60279 629 aa6.31□□□□□ -1.4
CDKL5-207ENST00000624700 GSNP06396 782 aa6.31□□□□□ -1.4
CDKL5-207ENST00000624700 EPHX1P07099 455 aa6.31□□□□□ -1.4
CDKL5-207ENST00000624700 RAP1GAPP47736 663 aa6.31□□□□□ -1.4
CDKL5-207ENST00000624700 RBM10P98175 930 aaKnown RBP6.31□□□□□ -1.4
CDKL5-207ENST00000624700 ZC3H12BQ5HYM0 836 aaKnown RBP6.31□□□□□ -1.4
CDKL5-207ENST00000624700 CDKAL1Q5VV42 579 aa6.31□□□□□ -1.4
CDKL5-207ENST00000624700 FYB2Q5VWT5 728 aa6.31□□□□□ -1.4
CDKL5-207ENST00000624700 TDRD10Q5VZ19 366 aaKnown RBP6.31□□□□□ -1.4
CDKL5-207ENST00000624700 DCAF15Q66K64 600 aa6.31□□□□□ -1.4
CDKL5-207ENST00000624700 TSPYL5Q86VY4 417 aaPredicted RBP6.31□□□□□ -1.4
CDKL5-207ENST00000624700 ARHGEF39Q8N4T4 335 aa6.31□□□□□ -1.4
CDKL5-207ENST00000624700 MICAL1Q8TDZ2 1067 aa6.31□□□□□ -1.4
CDKL5-207ENST00000624700 DUSP15Q9H1R2 295 aaPredicted RBP6.31□□□□□ -1.4
CDKL5-207ENST00000624700 CHST7Q9NS84 486 aa6.31□□□□□ -1.4
CDKL5-207ENST00000624700 SUGT1Q9Y2Z0 365 aa6.31□□□□□ -1.4
CDKL5-207ENST00000624700 ZNF451Q9Y4E5 1061 aa6.31□□□□□ -1.4
CDKL5-207ENST00000624700 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.3□□□□□ -1.4
CDKL5-207ENST00000624700 LONRF2Q1L5Z9 754 aa6.3□□□□□ -1.4
CDKL5-207ENST00000624700 SV2CQ496J9 727 aa6.3□□□□□ -1.4
CDKL5-207ENST00000624700 MTERF2Q49AM1 385 aa6.3□□□□□ -1.4
CDKL5-207ENST00000624700 CWF19L1Q69YN2 538 aaKnown RBP6.3□□□□□ -1.4
CDKL5-207ENST00000624700 CILP2Q8IUL8 1156 aa6.3□□□□□ -1.4
CDKL5-207ENST00000624700 LRRC47Q8N1G4 583 aaKnown RBP6.3□□□□□ -1.4
CDKL5-207ENST00000624700 BVESQ8NE79 360 aa6.3□□□□□ -1.4
CDKL5-207ENST00000624700 UBE2FQ969M7 185 aa6.3□□□□□ -1.4
CDKL5-207ENST00000624700 SYTL4Q96C24 671 aaPredicted RBP6.3□□□□□ -1.4
CDKL5-207ENST00000624700 CCDC140Q96MF4 163 aa6.3□□□□□ -1.4
CDKL5-207ENST00000624700 HSPA12BQ96MM6 686 aa6.3□□□□□ -1.4
CDKL5-207ENST00000624700 TOX2Q96NM4 488 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms