RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 GPR101Q96P66 508 aaPredicted RBP14.34□□□□□ -0.11
MSH6-215ENST00000622629 PLA2G12BQ9BX93 195 aa14.34□□□□□ -0.11
MSH6-215ENST00000622629 CCDC113Q9H0I3 377 aa14.34□□□□□ -0.11
MSH6-215ENST00000622629 CPVLQ9H3G5 476 aa14.34□□□□□ -0.11
MSH6-215ENST00000622629 LONP1P36776 959 aaKnown RBP14.34□□□□□ -0.11
MSH6-215ENST00000622629 CASP7P55210 303 aa14.34□□□□□ -0.11
MSH6-215ENST00000622629 LZTS2Q9BRK4 669 aa14.34□□□□□ -0.11
MSH6-215ENST00000622629 MINPP1Q9UNW1 487 aa14.34□□□□□ -0.11
MSH6-215ENST00000622629 CPDO75976 1380 aa14.34□□□□□ -0.11
MSH6-215ENST00000622629 ENC1O14682 589 aa14.34□□□□□ -0.11
MSH6-215ENST00000622629 RXRBP28702 533 aa14.34□□□□□ -0.11
MSH6-215ENST00000622629 CCZ1BP86790 482 aa14.34□□□□□ -0.11
MSH6-215ENST00000622629 CCZ1P86791 482 aaPredicted RBP14.34□□□□□ -0.11
MSH6-215ENST00000622629 RRAGAQ7L523 313 aa14.34□□□□□ -0.11
MSH6-215ENST00000622629 NEK8Q86SG6 692 aa14.34□□□□□ -0.11
MSH6-215ENST00000622629 SECISBP2LQ93073 1101 aaKnown RBP14.33□□□□□ -0.11
MSH6-215ENST00000622629 NUP58Q9BVL2 599 aa14.33□□□□□ -0.11
MSH6-215ENST00000622629 EPB41L4AQ9HCS5 686 aaPredicted RBP14.33□□□□□ -0.11
MSH6-215ENST00000622629 GDAQ9Y2T3 454 aa14.33□□□□□ -0.11
MSH6-215ENST00000622629 FAM170AA1A519 330 aa14.33□□□□□ -0.12
MSH6-215ENST00000622629 HSF2BPO75031 334 aa14.33□□□□□ -0.12
MSH6-215ENST00000622629 TUBBP07437 444 aa14.33□□□□□ -0.12
MSH6-215ENST00000622629 PPP1R2P41236 205 aa14.33□□□□□ -0.12
MSH6-215ENST00000622629 SLC1A4P43007 532 aa14.33□□□□□ -0.12
MSH6-215ENST00000622629 CLCN6P51797 869 aa14.33□□□□□ -0.12
MSH6-215ENST00000622629 BSDC1Q9NW68 430 aaPredicted RBP14.33□□□□□ -0.12
MSH6-215ENST00000622629 ANKRD26Q9UPS8 1709 aa14.33□□□□□ -0.12
MSH6-215ENST00000622629 STK36Q9NRP7 1315 aa14.33□□□□□ -0.12
MSH6-215ENST00000622629 TRAPPC10P48553 1259 aa14.33□□□□□ -0.12
MSH6-215ENST00000622629 DNM2P50570 870 aa14.33□□□□□ -0.12
MSH6-215ENST00000622629 PLS1Q14651 629 aa14.33□□□□□ -0.12
MSH6-215ENST00000622629 E4F1Q66K89 784 aaPredicted RBP14.33□□□□□ -0.12
MSH6-215ENST00000622629 USP17L2Q6R6M4 530 aa14.33□□□□□ -0.12
MSH6-215ENST00000622629 TMTC3Q6ZXV5 915 aa14.33□□□□□ -0.12
MSH6-215ENST00000622629 BPIFA3Q9BQP9 254 aa14.33□□□□□ -0.12
MSH6-215ENST00000622629 PLEKHA4Q9H4M7 779 aa14.33□□□□□ -0.12
MSH6-215ENST00000622629 B4DLN1 442 aa14.32□□□□□ -0.12
MSH6-215ENST00000622629 ANKRD13CQ8N6S4 541 aa14.32□□□□□ -0.12
MSH6-215ENST00000622629 SAR1BQ9Y6B6 198 aa14.32□□□□□ -0.12
MSH6-215ENST00000622629 MROH7-TTC4A0A0A0MT08 1334 aa14.32□□□□□ -0.12
MSH6-215ENST00000622629 TEX33O43247 280 aa14.32□□□□□ -0.12
MSH6-215ENST00000622629 CETN1Q12798 172 aa14.32□□□□□ -0.12
MSH6-215ENST00000622629 TOGARAM2Q6ZUX3 1019 aa14.32□□□□□ -0.12
MSH6-215ENST00000622629 PCDHA4Q9UN74 947 aa14.32□□□□□ -0.12
MSH6-215ENST00000622629 PHLPP2Q6ZVD8 1323 aa14.32□□□□□ -0.12
MSH6-215ENST00000622629 TUBGCP2Q9BSJ2 902 aa14.32□□□□□ -0.12
MSH6-215ENST00000622629 IFIH1Q9BYX4 1025 aaKnown RBP14.32□□□□□ -0.12
MSH6-215ENST00000622629 EPC1Q9H2F5 836 aa14.32□□□□□ -0.12
MSH6-215ENST00000622629 SCNN1DP51172 638 aa14.32□□□□□ -0.12
MSH6-215ENST00000622629 GRIN1Q05586 938 aa14.32□□□□□ -0.12
MSH6-215ENST00000622629 TUBB2AQ13885 445 aa14.32□□□□□ -0.12
MSH6-215ENST00000622629 KRT27Q7Z3Y8 459 aa14.32□□□□□ -0.12
MSH6-215ENST00000622629 SLC44A5Q8NCS7 719 aa14.32□□□□□ -0.12
MSH6-215ENST00000622629 TUBB2BQ9BVA1 445 aa14.32□□□□□ -0.12
MSH6-215ENST00000622629 CDC23Q9UJX2 597 aa14.32□□□□□ -0.12
MSH6-215ENST00000622629 SEMA3EO15041 775 aa14.31□□□□□ -0.12
MSH6-215ENST00000622629 CUL4BQ13620 913 aa14.31□□□□□ -0.12
MSH6-215ENST00000622629 ABCC12Q96J65 1359 aa14.31□□□□□ -0.12
MSH6-215ENST00000622629 CHMP2AO43633 222 aa14.31□□□□□ -0.12
MSH6-215ENST00000622629 VAV2P52735 878 aa14.31□□□□□ -0.12
MSH6-215ENST00000622629 USH1GQ495M9 461 aa14.31□□□□□ -0.12
MSH6-215ENST00000622629 DPP8Q6V1X1 898 aaPredicted RBP14.31□□□□□ -0.12
MSH6-215ENST00000622629 KMT5BQ4FZB7 885 aa14.31□□□□□ -0.12
MSH6-215ENST00000622629 CCDC84Q86UT8 332 aaPredicted RBP14.31□□□□□ -0.12
MSH6-215ENST00000622629 BRIP1Q9BX63 1249 aa14.31□□□□□ -0.12
MSH6-215ENST00000622629 RABEP2Q9H5N1 569 aa14.31□□□□□ -0.12
MSH6-215ENST00000622629 DCP1AQ9NPI6 582 aaPredicted RBP14.31□□□□□ -0.12
MSH6-215ENST00000622629 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.31□□□□□ -0.12
MSH6-215ENST00000622629 FAM13AO94988 1023 aa14.3□□□□□ -0.12
MSH6-215ENST00000622629 KRT31Q15323 416 aa14.3□□□□□ -0.12
MSH6-215ENST00000622629 ZNF772Q68DY9 489 aaPredicted RBP14.3□□□□□ -0.12
MSH6-215ENST00000622629 STXBP4Q6ZWJ1 553 aa14.3□□□□□ -0.12
MSH6-215ENST00000622629 USP40Q9NVE5 1235 aa14.3□□□□□ -0.12
MSH6-215ENST00000622629 CETN3O15182 167 aa14.3□□□□□ -0.12
MSH6-215ENST00000622629 PPARDQ03181 441 aa14.3□□□□□ -0.12
MSH6-215ENST00000622629 NCAPH2Q6IBW4 605 aa14.3□□□□□ -0.12
MSH6-215ENST00000622629 PLCD3Q8N3E9 789 aa14.3□□□□□ -0.12
MSH6-215ENST00000622629 RABGGTAQ92696 567 aa14.3□□□□□ -0.12
MSH6-215ENST00000622629 GJD4Q96KN9 370 aaPredicted RBP14.3□□□□□ -0.12
MSH6-215ENST00000622629 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.3□□□□□ -0.12
MSH6-215ENST00000622629 PKD2L1Q9P0L9 805 aa14.3□□□□□ -0.12
MSH6-215ENST00000622629 IFI16Q16666 785 aaKnown RBP14.3□□□□□ -0.12
MSH6-215ENST00000622629 RNF187Q5TA31 235 aaPredicted RBP14.3□□□□□ -0.12
MSH6-215ENST00000622629 ZNF658Q5TYW1 1059 aaPredicted RBP14.3□□□□□ -0.12
MSH6-215ENST00000622629 SRGAP1Q7Z6B7 1085 aa14.3□□□□□ -0.12
MSH6-215ENST00000622629 TSGA10Q9BZW7 698 aa14.3□□□□□ -0.12
MSH6-215ENST00000622629 HAUS4Q9H6D7 363 aa14.3□□□□□ -0.12
MSH6-215ENST00000622629 FBXO2Q9UK22 296 aaPredicted RBP14.3□□□□□ -0.12
MSH6-215ENST00000622629 FMR1Q06787 632 aaKnown RBP eCLIP14.29□□□□□ -0.129e-7■■■■□ 21.8
MSH6-215ENST00000622629 RBM43Q6ZSC3 357 aaKnown RBP14.29□□□□□ -0.12
MSH6-215ENST00000622629 FAM196AQ6ZSG2 479 aa14.29□□□□□ -0.12
MSH6-215ENST00000622629 HS2ST1Q7LGA3 356 aa14.29□□□□□ -0.12
MSH6-215ENST00000622629 ZNF579Q8NAF0 562 aaKnown RBP14.29□□□□□ -0.12
MSH6-215ENST00000622629 VEZTQ9HBM0 779 aa14.29□□□□□ -0.12
MSH6-215ENST00000622629 ZEB2O60315 1214 aa14.29□□□□□ -0.12
MSH6-215ENST00000622629 SLC9C1Q4G0N8 1177 aa14.29□□□□□ -0.12
MSH6-215ENST00000622629 TBC1D22AQ8WUA7 517 aa14.29□□□□□ -0.12
MSH6-215ENST00000622629 FAM84BQ96KN1 310 aaPredicted RBP14.29□□□□□ -0.12
MSH6-215ENST00000622629 CNOT6LQ96LI5 555 aaKnown RBP14.29□□□□□ -0.12
MSH6-215ENST00000622629 PCDHA12Q9UN75 941 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms