RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 NOL6Q9H6R4 1146 aaKnown RBP7.02□□□□□ -1.29
CPNE3-213ENST00000622183 GFOD1Q9NXC2 390 aa7.02□□□□□ -1.29
CPNE3-213ENST00000622183 RAXQ9Y2V3 346 aa7.02□□□□□ -1.29
CPNE3-213ENST00000622183 NOP58Q9Y2X3 529 aaKnown RBP7.02□□□□□ -1.29
CPNE3-213ENST00000622183 hCG_2014768A0A024R1R8 64 aa7.01□□□□□ -1.29
CPNE3-213ENST00000622183 HMX2A2RU54 273 aa7.01□□□□□ -1.29
CPNE3-213ENST00000622183 C1QTNF9BB2RNN3 333 aa7.01□□□□□ -1.29
CPNE3-213ENST00000622183 PRODHO43272 600 aa7.01□□□□□ -1.29
CPNE3-213ENST00000622183 NMIQ13287 307 aaPredicted RBP7.01□□□□□ -1.29
CPNE3-213ENST00000622183 PABPC4Q13310 644 aaKnown RBP eCLIP7.01□□□□□ -1.29
CPNE3-213ENST00000622183 CBX2Q14781 532 aaPredicted RBP7.01□□□□□ -1.29
CPNE3-213ENST00000622183 CYP27C1Q4G0S4 372 aa7.01□□□□□ -1.29
CPNE3-213ENST00000622183 FNDC3BQ53EP0 1204 aaKnown RBP7.01□□□□□ -1.29
CPNE3-213ENST00000622183 TM4SF20Q53R12 229 aa7.01□□□□□ -1.29
CPNE3-213ENST00000622183 GTF2IRD2BQ6EKJ0 949 aa7.01□□□□□ -1.29
CPNE3-213ENST00000622183 TMC3Q7Z5M5 1100 aa7.01□□□□□ -1.29
CPNE3-213ENST00000622183 GTF2IRD2Q86UP8 949 aa7.01□□□□□ -1.29
CPNE3-213ENST00000622183 PIWIL2Q8TC59 973 aaKnown RBP7.01□□□□□ -1.29
CPNE3-213ENST00000622183 BTN2A2Q8WVV5 523 aa7.01□□□□□ -1.29
CPNE3-213ENST00000622183 MFSD3Q96ES6 412 aa7.01□□□□□ -1.29
CPNE3-213ENST00000622183 CCDC140Q96MF4 163 aa7.01□□□□□ -1.29
CPNE3-213ENST00000622183 TBC1D32Q96NH3 1257 aa7.01□□□□□ -1.29
CPNE3-213ENST00000622183 MRPL4Q9BYD3 311 aaKnown RBP7.01□□□□□ -1.29
CPNE3-213ENST00000622183 PCDH12Q9NPG4 1184 aa7.01□□□□□ -1.29
CPNE3-213ENST00000622183 STOML1Q9UBI4 398 aa7.01□□□□□ -1.29
CPNE3-213ENST00000622183 SF3B6Q9Y3B4 125 aaKnown RBP7.01□□□□□ -1.29
CPNE3-213ENST00000622183 RAPGEF3O95398 923 aa7□□□□□ -1.29
CPNE3-213ENST00000622183 PRAMEF1O95521 474 aa7□□□□□ -1.29
CPNE3-213ENST00000622183 CBX7O95931 251 aa7□□□□□ -1.29
CPNE3-213ENST00000622183 IGBP1P78318 339 aa7□□□□□ -1.29
CPNE3-213ENST00000622183 CYP27A1Q02318 531 aa7□□□□□ -1.29
CPNE3-213ENST00000622183 PPP2R5DQ14738 602 aa7□□□□□ -1.29
CPNE3-213ENST00000622183 NIM1KQ8IY84 436 aa7□□□□□ -1.29
CPNE3-213ENST00000622183 ZDHHC15Q96MV8 337 aa7□□□□□ -1.29
CPNE3-213ENST00000622183 DSCC1Q9BVC3 393 aa7□□□□□ -1.29
CPNE3-213ENST00000622183 ASCC2Q9H1I8 757 aaPredicted RBP7□□□□□ -1.29
CPNE3-213ENST00000622183 NKX2-4Q9H2Z4 354 aa7□□□□□ -1.29
CPNE3-213ENST00000622183 CHST7Q9NS84 486 aa7□□□□□ -1.29
CPNE3-213ENST00000622183 PRR33A8MZF0 331 aa6.99□□□□□ -1.29
CPNE3-213ENST00000622183 RBAK-RBAKDNI3L0D1 243 aa6.99□□□□□ -1.29
CPNE3-213ENST00000622183 DLX3O60479 287 aa6.99□□□□□ -1.29
CPNE3-213ENST00000622183 HOXC12P31275 282 aa6.99□□□□□ -1.29
CPNE3-213ENST00000622183 GFRA1P56159 465 aa6.99□□□□□ -1.29
CPNE3-213ENST00000622183 ANAPC15P60006 121 aa6.99□□□□□ -1.29
CPNE3-213ENST00000622183 AMPD2Q01433 879 aa6.99□□□□□ -1.29
CPNE3-213ENST00000622183 MAP4K2Q12851 820 aa6.99□□□□□ -1.29
CPNE3-213ENST00000622183 C21orf62-AS1Q17RA5 79 aa6.99□□□□□ -1.29
CPNE3-213ENST00000622183 TRIM61Q5EBN2 209 aa6.99□□□□□ -1.29
CPNE3-213ENST00000622183 MFSD4AQ8N468 514 aa6.99□□□□□ -1.29
CPNE3-213ENST00000622183 ENOX1Q8TC92 643 aaKnown RBP6.99□□□□□ -1.29
CPNE3-213ENST00000622183 CYP26B1Q9NR63 512 aa6.99□□□□□ -1.29
CPNE3-213ENST00000622183 CAPN6Q9Y6Q1 641 aa6.99□□□□□ -1.29
CPNE3-213ENST00000622183 FAM170BA6NMN3 283 aa6.98□□□□□ -1.29
CPNE3-213ENST00000622183 GNAT3A8MTJ3 354 aa6.98□□□□□ -1.29
CPNE3-213ENST00000622183 KCNQ2O43526 872 aa6.98□□□□□ -1.29
CPNE3-213ENST00000622183 SCG5P05408 212 aa6.98□□□□□ -1.29
CPNE3-213ENST00000622183 GSNP06396 782 aa6.98□□□□□ -1.29
CPNE3-213ENST00000622183 ITIH2P19823 946 aa6.98□□□□□ -1.29
CPNE3-213ENST00000622183 GATA4P43694 442 aa6.98□□□□□ -1.29
CPNE3-213ENST00000622183 TNK2Q07912 1038 aa6.98□□□□□ -1.29
CPNE3-213ENST00000622183 RNF43Q68DV7 783 aa6.98□□□□□ -1.29
CPNE3-213ENST00000622183 PRR23CQ6ZRP0 262 aa6.98□□□□□ -1.29
CPNE3-213ENST00000622183 ZNF765Q7L2R6 523 aa6.98□□□□□ -1.29
CPNE3-213ENST00000622183 KRT26Q7Z3Y9 468 aa6.98□□□□□ -1.29
CPNE3-213ENST00000622183 DHX37Q8IY37 1157 aaKnown RBP6.98□□□□□ -1.29
CPNE3-213ENST00000622183 DAGLBQ8NCG7 672 aa6.98□□□□□ -1.29
CPNE3-213ENST00000622183 KCTD13Q8WZ19 329 aa6.98□□□□□ -1.29
CPNE3-213ENST00000622183 TP53INP1Q96A56 240 aa6.98□□□□□ -1.29
CPNE3-213ENST00000622183 SHISA3A0PJX4 238 aa6.97□□□□□ -1.29
CPNE3-213ENST00000622183 H0Y8X5 98 aa6.97□□□□□ -1.29
CPNE3-213ENST00000622183 IRS4O14654 1257 aaPredicted RBP6.97□□□□□ -1.29
CPNE3-213ENST00000622183 CPP00450 1065 aa6.97□□□□□ -1.29
CPNE3-213ENST00000622183 SNRPB2P08579 225 aaKnown RBP6.97□□□□□ -1.29
CPNE3-213ENST00000622183 C6orf222P0C671 652 aaPredicted RBP6.97□□□□□ -1.29
CPNE3-213ENST00000622183 SRFP11831 508 aa6.97□□□□□ -1.29
CPNE3-213ENST00000622183 CTSKP43235 329 aa6.97□□□□□ -1.29
CPNE3-213ENST00000622183 AMPD3Q01432 767 aa6.97□□□□□ -1.29
CPNE3-213ENST00000622183 SF1Q15637 639 aaKnown RBP6.97□□□□□ -1.29
CPNE3-213ENST00000622183 SLC35F1Q5T1Q4 408 aa6.97□□□□□ -1.29
CPNE3-213ENST00000622183 SHISA5Q8N114 240 aa6.97□□□□□ -1.29
CPNE3-213ENST00000622183 FBXL6Q8N531 539 aa6.97□□□□□ -1.29
CPNE3-213ENST00000622183 ZNF655Q8N720 491 aaPredicted RBP6.97□□□□□ -1.29
CPNE3-213ENST00000622183 C1orf159Q96HA4 380 aa6.97□□□□□ -1.29
CPNE3-213ENST00000622183 MFSD14AQ96MC6 490 aa6.97□□□□□ -1.29
CPNE3-213ENST00000622183 CLUHP3Q96NS8 147 aa6.97□□□□□ -1.29
CPNE3-213ENST00000622183 HDAC8Q9BY41 377 aa6.97□□□□□ -1.29
CPNE3-213ENST00000622183 GPR62Q9BZJ7 368 aa6.97□□□□□ -1.29
CPNE3-213ENST00000622183 SFMBT1Q9UHJ3 866 aa6.97□□□□□ -1.29
CPNE3-213ENST00000622183 MINPP1Q9UNW1 487 aa6.97□□□□□ -1.29
CPNE3-213ENST00000622183 GPR55Q9Y2T6 319 aaPredicted RBP6.97□□□□□ -1.29
CPNE3-213ENST00000622183 A0A087X0B3 334 aa6.96□□□□□ -1.3
CPNE3-213ENST00000622183 FAM155AB1AL88 458 aaPredicted RBP6.96□□□□□ -1.3
CPNE3-213ENST00000622183 MYCLP1P12525 358 aaPredicted RBP6.96□□□□□ -1.3
CPNE3-213ENST00000622183 CDK11BP21127 795 aaKnown RBP6.96□□□□□ -1.3
CPNE3-213ENST00000622183 KCNJ6P48051 423 aa6.96□□□□□ -1.3
CPNE3-213ENST00000622183 GABREP78334 506 aa6.96□□□□□ -1.3
CPNE3-213ENST00000622183 POU4F1Q01851 419 aa6.96□□□□□ -1.3
CPNE3-213ENST00000622183 CLEC16AQ2KHT3 1053 aa6.96□□□□□ -1.3
CPNE3-213ENST00000622183 DUSP27Q5VZP5 1158 aa6.96□□□□□ -1.3
CPNE3-213ENST00000622183 CWF19L1Q69YN2 538 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms