RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 CNKSR2Q8WXI2 1034 aa18.33■□□□□ 0.53
CBWD3-216ENST00000621396 LZTS2Q9BRK4 669 aa18.33■□□□□ 0.53
CBWD3-216ENST00000621396 FBXO28Q9NVF7 368 aa18.33■□□□□ 0.53
CBWD3-216ENST00000621396 ZHX2Q9Y6X8 837 aa18.33■□□□□ 0.53
CBWD3-216ENST00000621396 IQCA1LA6NCM1 817 aa18.33■□□□□ 0.52
CBWD3-216ENST00000621396 U2AF2P26368 475 aaKnown RBP eCLIP18.33■□□□□ 0.52
CBWD3-216ENST00000621396 SAFBQ15424 915 aaKnown RBP eCLIP18.33■□□□□ 0.52
CBWD3-216ENST00000621396 DDX49Q9Y6V7 483 aaKnown RBP18.33■□□□□ 0.52
CBWD3-216ENST00000621396 STXBP3O00186 592 aa18.32■□□□□ 0.52
CBWD3-216ENST00000621396 NOSTRINQ8IVI9 506 aa18.32■□□□□ 0.52
CBWD3-216ENST00000621396 SCYL3Q8IZE3 742 aa18.32■□□□□ 0.52
CBWD3-216ENST00000621396 DCAF4Q8WV16 495 aa18.32■□□□□ 0.52
CBWD3-216ENST00000621396 SPATA32Q96LK8 384 aa18.32■□□□□ 0.52
CBWD3-216ENST00000621396 ZNF408Q9H9D4 720 aa18.32■□□□□ 0.52
CBWD3-216ENST00000621396 BARHL2Q9NY43 387 aa18.32■□□□□ 0.52
CBWD3-216ENST00000621396 ZC3H4Q9UPT8 1303 aaKnown RBP18.32■□□□□ 0.52
CBWD3-216ENST00000621396 PTPRAP18433 802 aa18.32■□□□□ 0.52
CBWD3-216ENST00000621396 NAPAP54920 295 aa18.32■□□□□ 0.52
CBWD3-216ENST00000621396 CDCA5Q96FF9 252 aa18.32■□□□□ 0.52
CBWD3-216ENST00000621396 GMCL1Q96IK5 515 aa18.32■□□□□ 0.52
CBWD3-216ENST00000621396 VCPKMTQ9H867 229 aa18.32■□□□□ 0.52
CBWD3-216ENST00000621396 GOPCQ9HD26 462 aa18.32■□□□□ 0.52
CBWD3-216ENST00000621396 ZNF112Q9UJU3 913 aa18.32■□□□□ 0.52
CBWD3-216ENST00000621396 PPP2R3BQ9Y5P8 575 aa18.32■□□□□ 0.52
CBWD3-216ENST00000621396 LEO1Q8WVC0 666 aaPredicted RBP18.31■□□□□ 0.52
CBWD3-216ENST00000621396 NMRK2Q9NPI5 230 aa18.31■□□□□ 0.52
CBWD3-216ENST00000621396 PICK1Q9NRD5 415 aa18.31■□□□□ 0.52
CBWD3-216ENST00000621396 WNT7AO00755 349 aa18.31■□□□□ 0.52
CBWD3-216ENST00000621396 KRT2P35908 639 aa18.31■□□□□ 0.52
CBWD3-216ENST00000621396 VGLL4Q14135 290 aa18.31■□□□□ 0.52
CBWD3-216ENST00000621396 TTLL12Q14166 644 aaPredicted RBP18.31■□□□□ 0.52
CBWD3-216ENST00000621396 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.31■□□□□ 0.52
CBWD3-216ENST00000621396 KIFC2Q96AC6 838 aa18.31■□□□□ 0.52
CBWD3-216ENST00000621396 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.3■□□□□ 0.52
CBWD3-216ENST00000621396 CLMNQ96JQ2 1002 aa18.3■□□□□ 0.52
CBWD3-216ENST00000621396 TOB1P50616 345 aaPredicted RBP18.3■□□□□ 0.52
CBWD3-216ENST00000621396 QRICH1Q2TAL8 776 aa18.3■□□□□ 0.52
CBWD3-216ENST00000621396 USH1GQ495M9 461 aa18.3■□□□□ 0.52
CBWD3-216ENST00000621396 BRAPQ7Z569 592 aa18.3■□□□□ 0.52
CBWD3-216ENST00000621396 ATAD5Q96QE3 1844 aa18.29■□□□□ 0.52
CBWD3-216ENST00000621396 STAT2P52630 851 aa18.29■□□□□ 0.52
CBWD3-216ENST00000621396 CDC37Q16543 378 aaPredicted RBP18.29■□□□□ 0.52
CBWD3-216ENST00000621396 PIK3AP1Q6ZUJ8 805 aa18.29■□□□□ 0.52
CBWD3-216ENST00000621396 ZC3H15Q8WU90 426 aaKnown RBP18.29■□□□□ 0.52
CBWD3-216ENST00000621396 FOXP1Q9H334 677 aaPredicted RBP18.29■□□□□ 0.52
CBWD3-216ENST00000621396 RBM27Q9P2N5 1060 aaKnown RBP18.29■□□□□ 0.52
CBWD3-216ENST00000621396 SMCO2A6NFE2 343 aa18.29■□□□□ 0.52
CBWD3-216ENST00000621396 ZBTB5O15062 677 aa18.29■□□□□ 0.52
CBWD3-216ENST00000621396 PPP1R12BO60237 982 aaPredicted RBP18.29■□□□□ 0.52
CBWD3-216ENST00000621396 SF3A1Q15459 793 aaKnown RBP18.29■□□□□ 0.52
CBWD3-216ENST00000621396 PNMA8AQ86V59 439 aaPredicted RBP18.29■□□□□ 0.52
CBWD3-216ENST00000621396 HOOK2Q96ED9 719 aa18.29■□□□□ 0.52
CBWD3-216ENST00000621396 EMILIN3Q9NT22 766 aa18.29■□□□□ 0.52
CBWD3-216ENST00000621396 CFAP45Q9UL16 551 aa18.29■□□□□ 0.52
CBWD3-216ENST00000621396 PRR12Q9ULL5 1215 aa18.29■□□□□ 0.52
CBWD3-216ENST00000621396 PNMA6FA0A0J9YX94 578 aa18.28■□□□□ 0.52
CBWD3-216ENST00000621396 SMARCA1P28370 1054 aa18.28■□□□□ 0.52
CBWD3-216ENST00000621396 MARCKSP29966 332 aaPredicted RBP18.28■□□□□ 0.52
CBWD3-216ENST00000621396 HMGCS2P54868 508 aa18.28■□□□□ 0.52
CBWD3-216ENST00000621396 SYDE2Q5VT97 1194 aa18.28■□□□□ 0.52
CBWD3-216ENST00000621396 PGBD1Q96JS3 809 aa18.28■□□□□ 0.52
CBWD3-216ENST00000621396 PCDHB6Q9Y5E3 794 aa18.28■□□□□ 0.52
CBWD3-216ENST00000621396 MRVI1Q9Y6F6 885 aa18.28■□□□□ 0.52
CBWD3-216ENST00000621396 BLIDQ8IZY5 108 aa18.28■□□□□ 0.52
CBWD3-216ENST00000621396 ZNF280CQ8ND82 737 aa18.28■□□□□ 0.52
CBWD3-216ENST00000621396 SCAND2PQ9GZW5 306 aaPredicted RBP18.28■□□□□ 0.52
CBWD3-216ENST00000621396 CCDC174Q6PII3 467 aa18.27■□□□□ 0.52
CBWD3-216ENST00000621396 TNFRSF25Q93038 417 aa18.27■□□□□ 0.52
CBWD3-216ENST00000621396 ZNF396Q96N95 335 aaPredicted RBP18.27■□□□□ 0.52
CBWD3-216ENST00000621396 ELP3Q9H9T3 547 aa18.27■□□□□ 0.52
CBWD3-216ENST00000621396 BIN2Q9UBW5 565 aaPredicted RBP18.27■□□□□ 0.52
CBWD3-216ENST00000621396 PCDHA4Q9UN74 947 aa18.27■□□□□ 0.52
CBWD3-216ENST00000621396 SNCAIPQ9Y6H5 919 aa18.27■□□□□ 0.52
CBWD3-216ENST00000621396 VCAM1P19320 739 aa18.27■□□□□ 0.51
CBWD3-216ENST00000621396 MAP3K9P80192 1104 aa18.27■□□□□ 0.51
CBWD3-216ENST00000621396 CAVIN1Q6NZI2 390 aaKnown RBP18.27■□□□□ 0.51
CBWD3-216ENST00000621396 TANGO6Q9C0B7 1094 aa18.27■□□□□ 0.51
CBWD3-216ENST00000621396 KIAA1683Q9H0B3 1180 aa18.27■□□□□ 0.51
CBWD3-216ENST00000621396 SH2D4AQ9H788 454 aa18.27■□□□□ 0.51
CBWD3-216ENST00000621396 TMEM260Q9NX78 707 aa18.27■□□□□ 0.51
CBWD3-216ENST00000621396 PCDHA1Q9Y5I3 950 aa18.27■□□□□ 0.51
CBWD3-216ENST00000621396 BACE1P56817 501 aa18.26■□□□□ 0.51
CBWD3-216ENST00000621396 ANO1Q5XXA6 986 aa18.26■□□□□ 0.51
CBWD3-216ENST00000621396 TMEM87AQ8NBN3 555 aa18.26■□□□□ 0.51
CBWD3-216ENST00000621396 LINC00301Q8NCQ3 95 aa18.26■□□□□ 0.51
CBWD3-216ENST00000621396 MTMR8Q96EF0 704 aa18.26■□□□□ 0.51
CBWD3-216ENST00000621396 ZMYND12Q9H0C1 365 aa18.26■□□□□ 0.51
CBWD3-216ENST00000621396 BRMS1Q9HCU9 246 aa18.26■□□□□ 0.51
CBWD3-216ENST00000621396 PCDHA6Q9UN73 950 aa18.26■□□□□ 0.51
CBWD3-216ENST00000621396 PCDHA8Q9Y5H6 950 aa18.26■□□□□ 0.51
CBWD3-216ENST00000621396 UBE2SQ16763 222 aa18.25■□□□□ 0.51
CBWD3-216ENST00000621396 JAKMIP3Q5VZ66 844 aa18.25■□□□□ 0.51
CBWD3-216ENST00000621396 SH3GLB2Q9NR46 395 aa18.25■□□□□ 0.51
CBWD3-216ENST00000621396 ME1P48163 572 aa18.25■□□□□ 0.51
CBWD3-216ENST00000621396 STK38Q15208 465 aa18.25■□□□□ 0.51
CBWD3-216ENST00000621396 OTUD5Q96G74 571 aa18.25■□□□□ 0.51
CBWD3-216ENST00000621396 RTEL1Q9NZ71 1219 aa18.25■□□□□ 0.51
CBWD3-216ENST00000621396 SMCHD1A6NHR9 2005 aa18.25■□□□□ 0.51
CBWD3-216ENST00000621396 SCN4AP35499 1836 aa18.24■□□□□ 0.51
CBWD3-216ENST00000621396 CCDC148Q8NFR7 591 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms