RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 DNAH12Q6ZR08 3092 aa19.06■□□□□ 0.64
CD40-207ENST00000620709 GREB1LQ9C091 1923 aaPredicted RBP19.05■□□□□ 0.64
CD40-207ENST00000620709 COL6A1P12109 1028 aa19.05■□□□□ 0.64
CD40-207ENST00000620709 ANP32AP39687 249 aaKnown RBP19.05■□□□□ 0.64
CD40-207ENST00000620709 LRRC26Q2I0M4 334 aa19.05■□□□□ 0.64
CD40-207ENST00000620709 GJC2Q5T442 439 aaPredicted RBP19.05■□□□□ 0.64
CD40-207ENST00000620709 ABRAQ8N0Z2 381 aa19.05■□□□□ 0.64
CD40-207ENST00000620709 CEP95Q96GE4 821 aa19.05■□□□□ 0.64
CD40-207ENST00000620709 MAML3Q96JK9 1138 aa19.05■□□□□ 0.64
CD40-207ENST00000620709 ADAMTS5Q9UNA0 930 aa19.05■□□□□ 0.64
CD40-207ENST00000620709 ATN1P54259 1190 aaPredicted RBP19.05■□□□□ 0.64
CD40-207ENST00000620709 PPARAQ07869 468 aa19.05■□□□□ 0.64
CD40-207ENST00000620709 CPXCR1Q8N123 301 aa19.05■□□□□ 0.64
CD40-207ENST00000620709 KIFC2Q96AC6 838 aa19.05■□□□□ 0.64
CD40-207ENST00000620709 SZT2Q5T011 3432 aa19.04■□□□□ 0.64
CD40-207ENST00000620709 TFAP4Q01664 338 aa19.04■□□□□ 0.64
CD40-207ENST00000620709 SNRNP48Q6IEG0 339 aaKnown RBP19.04■□□□□ 0.64
CD40-207ENST00000620709 MTMR4Q9NYA4 1195 aa19.04■□□□□ 0.64
CD40-207ENST00000620709 ZNF214Q9UL59 606 aaPredicted RBP19.04■□□□□ 0.64
CD40-207ENST00000620709 IGKV6D-41A0A0C4DH26 115 aa19.03■□□□□ 0.64
CD40-207ENST00000620709 ZBED4O75132 1171 aa19.03■□□□□ 0.64
CD40-207ENST00000620709 TTLL1O95922 423 aa19.03■□□□□ 0.64
CD40-207ENST00000620709 CTDSPL2Q05D32 466 aa19.03■□□□□ 0.64
CD40-207ENST00000620709 EVI5LQ96CN4 794 aa19.03■□□□□ 0.64
CD40-207ENST00000620709 DNM1LO00429 736 aa19.02■□□□□ 0.64
CD40-207ENST00000620709 SEPT4O43236 478 aa19.02■□□□□ 0.64
CD40-207ENST00000620709 COPB2P35606 906 aa19.02■□□□□ 0.64
CD40-207ENST00000620709 MAGEA10P43363 369 aaPredicted RBP19.02■□□□□ 0.64
CD40-207ENST00000620709 PRPF38AQ8NAV1 312 aaKnown RBP19.02■□□□□ 0.64
CD40-207ENST00000620709 ARRDC4Q8NCT1 418 aa19.02■□□□□ 0.64
CD40-207ENST00000620709 REPS2Q8NFH8 660 aa19.02■□□□□ 0.64
CD40-207ENST00000620709 GDF15Q99988 308 aa19.02■□□□□ 0.64
CD40-207ENST00000620709 TEX13BQ9BXU2 312 aa19.02■□□□□ 0.64
CD40-207ENST00000620709 KBTBD13C9JR72 458 aa19.01■□□□□ 0.63
CD40-207ENST00000620709 IGHA2P01877 340 aa19.01■□□□□ 0.63
CD40-207ENST00000620709 IKQ13123 557 aaPredicted RBP19.01■□□□□ 0.63
CD40-207ENST00000620709 SLFN13Q68D06 897 aa19.01■□□□□ 0.63
CD40-207ENST00000620709 NEDD1Q8NHV4 660 aa19.01■□□□□ 0.63
CD40-207ENST00000620709 DDX11Q96FC9 970 aa19.01■□□□□ 0.63
CD40-207ENST00000620709 TBC1D32Q96NH3 1257 aa19.01■□□□□ 0.63
CD40-207ENST00000620709 RAVER2Q9HCJ3 691 aaKnown RBP19.01■□□□□ 0.63
CD40-207ENST00000620709 INCENPQ9NQS7 918 aa19.01■□□□□ 0.63
CD40-207ENST00000620709 PLXNA1Q9UIW2 1896 aa19.01■□□□□ 0.63
CD40-207ENST00000620709 A0A1W2PPC1 479 aa19■□□□□ 0.63
CD40-207ENST00000620709 CHMLP26374 656 aa19■□□□□ 0.63
CD40-207ENST00000620709 MDM2Q00987 491 aaPredicted RBP19■□□□□ 0.63
CD40-207ENST00000620709 VPS53Q5VIR6 699 aa19■□□□□ 0.63
CD40-207ENST00000620709 MKL1Q969V6 931 aa19■□□□□ 0.63
CD40-207ENST00000620709 UBE2OQ9C0C9 1292 aaKnown RBP19■□□□□ 0.63
CD40-207ENST00000620709 FEM1BQ9UK73 627 aa19■□□□□ 0.63
CD40-207ENST00000620709 MTMR7Q9Y216 660 aa19■□□□□ 0.63
CD40-207ENST00000620709 RIPK3Q9Y572 518 aa19■□□□□ 0.63
CD40-207ENST00000620709 TSPY2A6NKD2 308 aa19■□□□□ 0.63
CD40-207ENST00000620709 BMP3P12645 472 aa19■□□□□ 0.63
CD40-207ENST00000620709 ZNF792Q3KQV3 632 aa19■□□□□ 0.63
CD40-207ENST00000620709 TINF2Q9BSI4 451 aa19■□□□□ 0.63
CD40-207ENST00000620709 TOMM22Q9NS69 142 aa19■□□□□ 0.63
CD40-207ENST00000620709 STX8Q9UNK0 236 aa19■□□□□ 0.63
CD40-207ENST00000620709 ATP11BQ9Y2G3 1177 aa19■□□□□ 0.63
CD40-207ENST00000620709 SOX1O00570 391 aaPredicted RBP18.99■□□□□ 0.63
CD40-207ENST00000620709 RANBP6O60518 1105 aaKnown RBP18.99■□□□□ 0.63
CD40-207ENST00000620709 TAL1P17542 331 aaPredicted RBP18.99■□□□□ 0.63
CD40-207ENST00000620709 GMCL1P1Q8NEA9 526 aa18.99■□□□□ 0.63
CD40-207ENST00000620709 FERMT2Q96AC1 680 aa18.99■□□□□ 0.63
CD40-207ENST00000620709 LRCH3Q96II8 777 aa18.99■□□□□ 0.63
CD40-207ENST00000620709 C22orf23Q9BZE7 217 aa18.99■□□□□ 0.63
CD40-207ENST00000620709 TMEM232C9JQI7 657 aa18.98■□□□□ 0.63
CD40-207ENST00000620709 HIP1O00291 1037 aa18.98■□□□□ 0.63
CD40-207ENST00000620709 REC8O95072 547 aa18.98■□□□□ 0.63
CD40-207ENST00000620709 BMP8BP34820 402 aa18.98■□□□□ 0.63
CD40-207ENST00000620709 ADCYAP1R1P41586 468 aa18.98■□□□□ 0.63
CD40-207ENST00000620709 RTP1P59025 263 aa18.98■□□□□ 0.63
CD40-207ENST00000620709 FAM227BQ96M60 508 aa18.98■□□□□ 0.63
CD40-207ENST00000620709 ESYT1Q9BSJ8 1104 aa18.98■□□□□ 0.63
CD40-207ENST00000620709 HELLSQ9NRZ9 838 aa18.98■□□□□ 0.63
CD40-207ENST00000620709 HOMER2Q9NSB8 354 aa18.98■□□□□ 0.63
CD40-207ENST00000620709 PRKAG2Q9UGJ0 569 aa18.98■□□□□ 0.63
CD40-207ENST00000620709 CNPY2Q9Y2B0 182 aa18.98■□□□□ 0.63
CD40-207ENST00000620709 FOXP2O15409 715 aa18.97■□□□□ 0.63
CD40-207ENST00000620709 NMT2O60551 498 aa18.97■□□□□ 0.63
CD40-207ENST00000620709 RARBP10826 455 aa18.97■□□□□ 0.63
CD40-207ENST00000620709 MCCP23508 829 aa18.97■□□□□ 0.63
CD40-207ENST00000620709 LRRC41Q15345 812 aa18.97■□□□□ 0.63
CD40-207ENST00000620709 RRP12Q5JTH9 1297 aaKnown RBP18.97■□□□□ 0.63
CD40-207ENST00000620709 ANKRD35Q8N283 1001 aa18.97■□□□□ 0.63
CD40-207ENST00000620709 LBHD1Q9BQE6 289 aaPredicted RBP18.97■□□□□ 0.63
CD40-207ENST00000620709 SLC38A10Q9HBR0 1119 aa18.97■□□□□ 0.63
CD40-207ENST00000620709 XPNPEP3Q9NQH7 507 aa18.97■□□□□ 0.63
CD40-207ENST00000620709 DIS3Q9Y2L1 958 aaKnown RBP18.97■□□□□ 0.63
CD40-207ENST00000620709 SMCHD1A6NHR9 2005 aa18.97■□□□□ 0.63
CD40-207ENST00000620709 LAMA3Q16787 3333 aa18.96■□□□□ 0.63
CD40-207ENST00000620709 PLIN4Q96Q06 1357 aa18.96■□□□□ 0.63
CD40-207ENST00000620709 A0A0D9SFI3 127 aa18.96■□□□□ 0.63
CD40-207ENST00000620709 SLC1A4P43007 532 aa18.96■□□□□ 0.63
CD40-207ENST00000620709 DIAPH3Q9NSV4 1193 aa18.96■□□□□ 0.63
CD40-207ENST00000620709 SYNPO2Q9UMS6 1093 aa18.96■□□□□ 0.63
CD40-207ENST00000620709 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.96■□□□□ 0.63
CD40-207ENST00000620709 PGK1P00558 417 aa18.95■□□□□ 0.62
CD40-207ENST00000620709 STAT2P52630 851 aa18.95■□□□□ 0.62
CD40-207ENST00000620709 NMIQ13287 307 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms