RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 HERVK_113P62684 666 aa15.91■□□□□ 0.14
NEK3-210ENST00000620675 FANCBQ8NB91 859 aa15.91■□□□□ 0.14
NEK3-210ENST00000620675 ADGRA2Q96PE1 1338 aa15.91■□□□□ 0.14
NEK3-210ENST00000620675 MGAMO43451 1857 aa15.91■□□□□ 0.14
NEK3-210ENST00000620675 ZNFX1Q9P2E3 1918 aaKnown RBP15.91■□□□□ 0.14
NEK3-210ENST00000620675 ECM2O94769 699 aaPredicted RBP15.91■□□□□ 0.14
NEK3-210ENST00000620675 DSG3P32926 999 aa15.91■□□□□ 0.14
NEK3-210ENST00000620675 ST3GAL1Q11201 340 aa15.91■□□□□ 0.14
NEK3-210ENST00000620675 IKQ13123 557 aaPredicted RBP15.91■□□□□ 0.14
NEK3-210ENST00000620675 COG2Q14746 738 aa15.91■□□□□ 0.14
NEK3-210ENST00000620675 ME3Q16798 604 aa15.91■□□□□ 0.14
NEK3-210ENST00000620675 CCDC82Q8N4S0 544 aa15.91■□□□□ 0.14
NEK3-210ENST00000620675 NECAB1Q8N987 351 aa15.91■□□□□ 0.14
NEK3-210ENST00000620675 PPP1R9AQ9ULJ8 1098 aa15.91■□□□□ 0.14
NEK3-210ENST00000620675 GOLGA8AA7E2F4 631 aa15.9■□□□□ 0.14
NEK3-210ENST00000620675 KLRF2D3W0D1 207 aa15.9■□□□□ 0.14
NEK3-210ENST00000620675 STAT2P52630 851 aa15.9■□□□□ 0.14
NEK3-210ENST00000620675 SRBD1Q8N5C6 995 aaKnown RBP15.9■□□□□ 0.14
NEK3-210ENST00000620675 PIBF1Q8WXW3 757 aa15.9■□□□□ 0.14
NEK3-210ENST00000620675 SLF1Q9BQI6 1058 aa15.9■□□□□ 0.14
NEK3-210ENST00000620675 VAT1LQ9HCJ6 419 aa15.9■□□□□ 0.14
NEK3-210ENST00000620675 BTBD7Q9P203 1132 aa15.9■□□□□ 0.14
NEK3-210ENST00000620675 CPA4Q9UI42 421 aa15.9■□□□□ 0.14
NEK3-210ENST00000620675 PRR12Q9ULL5 1215 aa15.9■□□□□ 0.14
NEK3-210ENST00000620675 SLC45A1Q9Y2W3 748 aa15.9■□□□□ 0.14
NEK3-210ENST00000620675 hCG_1642624A0A1W2PR95 340 aa15.9■□□□□ 0.14
NEK3-210ENST00000620675 CNMDO75829 334 aa15.9■□□□□ 0.14
NEK3-210ENST00000620675 ASPRV1Q53RT3 343 aa15.9■□□□□ 0.14
NEK3-210ENST00000620675 PAGR1Q9BTK6 254 aa15.9■□□□□ 0.14
NEK3-210ENST00000620675 WBP1LQ9NX94 342 aa15.9■□□□□ 0.14
NEK3-210ENST00000620675 RBPJLQ9UBG7 517 aa15.9■□□□□ 0.14
NEK3-210ENST00000620675 CA12O43570 354 aa15.89■□□□□ 0.13
NEK3-210ENST00000620675 OSBPP22059 807 aa15.89■□□□□ 0.13
NEK3-210ENST00000620675 METAP2P50579 478 aaKnown RBP eCLIP15.89■□□□□ 0.13
NEK3-210ENST00000620675 CAP1Q01518 475 aa15.89■□□□□ 0.13
NEK3-210ENST00000620675 RTN1Q16799 776 aa15.89■□□□□ 0.13
NEK3-210ENST00000620675 Q3C1V9 767 aa15.89■□□□□ 0.13
NEK3-210ENST00000620675 GPATCH4Q5T3I0 446 aaKnown RBP15.89■□□□□ 0.13
NEK3-210ENST00000620675 BTNL9Q6UXG8 535 aa15.89■□□□□ 0.13
NEK3-210ENST00000620675 ADGRF4Q8IZF3 695 aa15.89■□□□□ 0.13
NEK3-210ENST00000620675 ANKRD13CQ8N6S4 541 aa15.89■□□□□ 0.13
NEK3-210ENST00000620675 REPS2Q8NFH8 660 aa15.89■□□□□ 0.13
NEK3-210ENST00000620675 SMCR8Q8TEV9 937 aaPredicted RBP15.89■□□□□ 0.13
NEK3-210ENST00000620675 FEM1BQ9UK73 627 aa15.89■□□□□ 0.13
NEK3-210ENST00000620675 VWA5AO00534 786 aa15.88■□□□□ 0.13
NEK3-210ENST00000620675 SCRN1Q12765 414 aa15.88■□□□□ 0.13
NEK3-210ENST00000620675 PABPC4Q13310 644 aaKnown RBP eCLIP15.88■□□□□ 0.13
NEK3-210ENST00000620675 SYDE2Q5VT97 1194 aa15.88■□□□□ 0.13
NEK3-210ENST00000620675 OTUD7BQ6GQQ9 843 aa15.88■□□□□ 0.13
NEK3-210ENST00000620675 SYNE3Q6ZMZ3 975 aa15.88■□□□□ 0.13
NEK3-210ENST00000620675 CTCFLQ8NI51 663 aaPredicted RBP15.88■□□□□ 0.13
NEK3-210ENST00000620675 PARK7Q99497 189 aaKnown RBP15.88■□□□□ 0.13
NEK3-210ENST00000620675 ADAMTS5Q9UNA0 930 aa15.88■□□□□ 0.13
NEK3-210ENST00000620675 FUT2Q10981 343 aa15.88■□□□□ 0.13
NEK3-210ENST00000620675 TMEM132BQ14DG7 1078 aa15.88■□□□□ 0.13
NEK3-210ENST00000620675 TMTC3Q6ZXV5 915 aa15.88■□□□□ 0.13
NEK3-210ENST00000620675 JMYQ8N9B5 988 aa15.88■□□□□ 0.13
NEK3-210ENST00000620675 PRPF38AQ8NAV1 312 aaKnown RBP15.88■□□□□ 0.13
NEK3-210ENST00000620675 ZNF274Q96GC6 653 aaPredicted RBP15.88■□□□□ 0.13
NEK3-210ENST00000620675 JMJD4Q9H9V9 463 aa15.88■□□□□ 0.13
NEK3-210ENST00000620675 ZCCHC17Q9NP64 241 aaKnown RBP15.88■□□□□ 0.13
NEK3-210ENST00000620675 PNMA3Q9UL41 463 aa15.88■□□□□ 0.13
NEK3-210ENST00000620675 NID2Q14112 1375 aa15.87■□□□□ 0.13
NEK3-210ENST00000620675 BRCA2P51587 3418 aa15.87■□□□□ 0.13
NEK3-210ENST00000620675 TLR2O60603 784 aa15.87■□□□□ 0.13
NEK3-210ENST00000620675 LBX2Q6XYB7 198 aa15.87■□□□□ 0.13
NEK3-210ENST00000620675 REM2Q8IYK8 340 aaPredicted RBP15.87■□□□□ 0.13
NEK3-210ENST00000620675 CHURC1Q8WUH1 139 aa15.87■□□□□ 0.13
NEK3-210ENST00000620675 MAP3K14Q99558 947 aa15.87■□□□□ 0.13
NEK3-210ENST00000620675 ZNF536O15090 1300 aa15.87■□□□□ 0.13
NEK3-210ENST00000620675 PLA2G6O60733 806 aa15.87■□□□□ 0.13
NEK3-210ENST00000620675 CALM1P0DP23 149 aa15.87■□□□□ 0.13
NEK3-210ENST00000620675 CALM2P0DP24 149 aa15.87■□□□□ 0.13
NEK3-210ENST00000620675 CALM3P0DP25 149 aa15.87■□□□□ 0.13
NEK3-210ENST00000620675 MAP2K1Q02750 393 aaPredicted RBP15.87■□□□□ 0.13
NEK3-210ENST00000620675 ANKRD1Q15327 319 aa15.87■□□□□ 0.13
NEK3-210ENST00000620675 NTRK3Q16288 839 aa15.87■□□□□ 0.13
NEK3-210ENST00000620675 CCDC174Q6PII3 467 aa15.87■□□□□ 0.13
NEK3-210ENST00000620675 C17orf99Q6UX52 265 aa15.87■□□□□ 0.13
NEK3-210ENST00000620675 CPXCR1Q8N123 301 aa15.87■□□□□ 0.13
NEK3-210ENST00000620675 PHKBQ93100 1093 aa15.87■□□□□ 0.13
NEK3-210ENST00000620675 SLC38A10Q9HBR0 1119 aa15.87■□□□□ 0.13
NEK3-210ENST00000620675 ZFYVE28Q9HCC9 887 aa15.87■□□□□ 0.13
NEK3-210ENST00000620675 HOXC10Q9NYD6 342 aa15.87■□□□□ 0.13
NEK3-210ENST00000620675 ZNF214Q9UL59 606 aaPredicted RBP15.87■□□□□ 0.13
NEK3-210ENST00000620675 PFKFB2O60825 505 aa15.86■□□□□ 0.13
NEK3-210ENST00000620675 PPP1R11O60927 126 aaPredicted RBP15.86■□□□□ 0.13
NEK3-210ENST00000620675 BCRP11274 1271 aa15.86■□□□□ 0.13
NEK3-210ENST00000620675 FAM160B2Q86V87 743 aa15.86■□□□□ 0.13
NEK3-210ENST00000620675 HOMER1Q86YM7 354 aa15.86■□□□□ 0.13
NEK3-210ENST00000620675 AGBL1Q96MI9 1066 aa15.86■□□□□ 0.13
NEK3-210ENST00000620675 PIGSQ96S52 555 aa15.86■□□□□ 0.13
NEK3-210ENST00000620675 RAVER2Q9HCJ3 691 aaKnown RBP15.86■□□□□ 0.13
NEK3-210ENST00000620675 LIMCH1Q9UPQ0 1083 aa15.86■□□□□ 0.13
NEK3-210ENST00000620675 RIPK3Q9Y572 518 aa15.86■□□□□ 0.13
NEK3-210ENST00000620675 CNTNAP5Q8WYK1 1306 aa15.86■□□□□ 0.13
NEK3-210ENST00000620675 PLXNB2O15031 1838 aa15.85■□□□□ 0.13
NEK3-210ENST00000620675 DHX16O60231 1041 aaKnown RBP15.85■□□□□ 0.13
NEK3-210ENST00000620675 ST18O60284 1047 aa15.85■□□□□ 0.13
NEK3-210ENST00000620675 CTDNEP1O95476 244 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms