RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 DNAJC10Q8IXB1 793 aa9.91□□□□□ -0.82
CBWD1-228ENST00000619157 GTF3C2Q8WUA4 911 aaPredicted RBP9.91□□□□□ -0.82
CBWD1-228ENST00000619157 KRTAP4-9Q9BYQ8 210 aa9.91□□□□□ -0.82
CBWD1-228ENST00000619157 SEMA6CQ9H3T2 930 aa9.91□□□□□ -0.82
CBWD1-228ENST00000619157 FAM105AQ9NUU6 356 aa9.91□□□□□ -0.82
CBWD1-228ENST00000619157 POLR3DP05423 398 aaPredicted RBP9.9□□□□□ -0.82
CBWD1-228ENST00000619157 SSFA2P28290 1259 aa9.9□□□□□ -0.82
CBWD1-228ENST00000619157 CRKLP46109 303 aaKnown RBP9.9□□□□□ -0.82
CBWD1-228ENST00000619157 AAMPQ13685 434 aa9.9□□□□□ -0.82
CBWD1-228ENST00000619157 MCM10Q7L590 875 aa9.9□□□□□ -0.82
CBWD1-228ENST00000619157 SYT17Q9BSW7 474 aa9.9□□□□□ -0.82
CBWD1-228ENST00000619157 PPP1R1BQ9UD71 204 aaPredicted RBP9.9□□□□□ -0.82
CBWD1-228ENST00000619157 AP4E1Q9UPM8 1137 aa9.9□□□□□ -0.82
CBWD1-228ENST00000619157 CYP19A1P11511 503 aaPredicted RBP9.89□□□□□ -0.83
CBWD1-228ENST00000619157 MAP7Q14244 749 aa9.89□□□□□ -0.83
CBWD1-228ENST00000619157 CCDC184Q52MB2 194 aa9.89□□□□□ -0.83
CBWD1-228ENST00000619157 ZNF496Q96IT1 587 aaPredicted RBP9.89□□□□□ -0.83
CBWD1-228ENST00000619157 C4AP0C0L4 1744 aa9.89□□□□□ -0.83
CBWD1-228ENST00000619157 DYNC1LI2O43237 492 aaPredicted RBP9.88□□□□□ -0.83
CBWD1-228ENST00000619157 RPS6KA4O75676 772 aa9.88□□□□□ -0.83
CBWD1-228ENST00000619157 PCDH1Q08174 1060 aa9.88□□□□□ -0.83
CBWD1-228ENST00000619157 PLCL1Q15111 1095 aa9.88□□□□□ -0.83
CBWD1-228ENST00000619157 ZNF124Q15973 351 aa9.88□□□□□ -0.83
CBWD1-228ENST00000619157 ZNF790Q6PG37 636 aa9.88□□□□□ -0.83
CBWD1-228ENST00000619157 FLAD1Q8NFF5 587 aa9.88□□□□□ -0.83
CBWD1-228ENST00000619157 NLGN2Q8NFZ4 835 aa9.88□□□□□ -0.83
CBWD1-228ENST00000619157 PBXIP1Q96AQ6 731 aa9.88□□□□□ -0.83
CBWD1-228ENST00000619157 THUMPD2Q9BTF0 503 aaKnown RBP9.88□□□□□ -0.83
CBWD1-228ENST00000619157 DLG5Q8TDM6 1919 aa9.88□□□□□ -0.83
CBWD1-228ENST00000619157 PRAMEF22A3QJZ6 481 aa9.87□□□□□ -0.83
CBWD1-228ENST00000619157 ECEL1O95672 775 aa9.87□□□□□ -0.83
CBWD1-228ENST00000619157 TEFQ10587 303 aa9.87□□□□□ -0.83
CBWD1-228ENST00000619157 NFE2L2Q16236 605 aa9.87□□□□□ -0.83
CBWD1-228ENST00000619157 LCE4AQ5TA78 99 aa9.87□□□□□ -0.83
CBWD1-228ENST00000619157 BCL7CQ8WUZ0 217 aaPredicted RBP9.87□□□□□ -0.83
CBWD1-228ENST00000619157 SRP68Q9UHB9 627 aaKnown RBP9.87□□□□□ -0.83
CBWD1-228ENST00000619157 ZBTB1Q9Y2K1 713 aa9.87□□□□□ -0.83
CBWD1-228ENST00000619157 HEG1Q9ULI3 1381 aa9.87□□□□□ -0.83
CBWD1-228ENST00000619157 SOS1Q07889 1333 aaPredicted RBP9.86□□□□□ -0.83
CBWD1-228ENST00000619157 HTATSF1O43719 755 aaKnown RBP9.86□□□□□ -0.83
CBWD1-228ENST00000619157 GYS1P13807 737 aa9.86□□□□□ -0.83
CBWD1-228ENST00000619157 CYP27A1Q02318 531 aa9.86□□□□□ -0.83
CBWD1-228ENST00000619157 POU4F3Q15319 338 aa9.86□□□□□ -0.83
CBWD1-228ENST00000619157 ZNF423Q2M1K9 1284 aa9.86□□□□□ -0.83
CBWD1-228ENST00000619157 SPRED3Q2MJR0 410 aa9.86□□□□□ -0.83
CBWD1-228ENST00000619157 ZNF792Q3KQV3 632 aa9.86□□□□□ -0.83
CBWD1-228ENST00000619157 SPRED2Q7Z698 418 aa9.86□□□□□ -0.83
CBWD1-228ENST00000619157 WFDC3Q8IUB2 231 aa9.86□□□□□ -0.83
CBWD1-228ENST00000619157 ACSS3Q9H6R3 686 aa9.86□□□□□ -0.83
CBWD1-228ENST00000619157 RAD18Q9NS91 495 aa9.86□□□□□ -0.83
CBWD1-228ENST00000619157 MIS18AQ9NYP9 233 aa9.86□□□□□ -0.83
CBWD1-228ENST00000619157 SLC5A6Q9Y289 635 aa9.86□□□□□ -0.83
CBWD1-228ENST00000619157 DAGLAQ9Y4D2 1042 aa9.86□□□□□ -0.83
CBWD1-228ENST00000619157 POLD1P28340 1107 aa9.85□□□□□ -0.83
CBWD1-228ENST00000619157 CCDC146Q8IYE0 955 aa9.85□□□□□ -0.83
CBWD1-228ENST00000619157 C1GALT1Q9NS00 363 aa9.85□□□□□ -0.83
CBWD1-228ENST00000619157 CCDC87Q9NVE4 849 aa9.85□□□□□ -0.83
CBWD1-228ENST00000619157 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.85□□□□□ -0.83
CBWD1-228ENST00000619157 USP42Q9H9J4 1324 aaKnown RBP9.84□□□□□ -0.83
CBWD1-228ENST00000619157 KDM3BQ7LBC6 1761 aa9.84□□□□□ -0.83
CBWD1-228ENST00000619157 A0A096LPE4 126 aa9.84□□□□□ -0.83
CBWD1-228ENST00000619157 A0A1W2PPZ6 126 aa9.84□□□□□ -0.83
CBWD1-228ENST00000619157 ASPAP45381 313 aa9.84□□□□□ -0.83
CBWD1-228ENST00000619157 GRIA4P48058 902 aa9.84□□□□□ -0.83
CBWD1-228ENST00000619157 BNIP3Q12983 259 aa9.84□□□□□ -0.83
CBWD1-228ENST00000619157 ALKBH2Q6NS38 261 aa9.84□□□□□ -0.83
CBWD1-228ENST00000619157 TTC5Q8N0Z6 440 aa9.84□□□□□ -0.83
CBWD1-228ENST00000619157 CLEC4MQ9H2X3 399 aaPredicted RBP9.84□□□□□ -0.83
CBWD1-228ENST00000619157 RRP7AQ9Y3A4 280 aaKnown RBP9.84□□□□□ -0.83
CBWD1-228ENST00000619157 USP16Q9Y5T5 823 aa9.84□□□□□ -0.83
CBWD1-228ENST00000619157 KIAA1551Q9HCM1 1747 aa9.83□□□□□ -0.84
CBWD1-228ENST00000619157 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.83□□□□□ -0.84
CBWD1-228ENST00000619157 A1BGP04217 495 aa9.83□□□□□ -0.84
CBWD1-228ENST00000619157 CYP11A1P05108 521 aa9.83□□□□□ -0.84
CBWD1-228ENST00000619157 MMP10P09238 476 aa9.83□□□□□ -0.84
CBWD1-228ENST00000619157 HMGB2P26583 209 aaKnown RBP9.83□□□□□ -0.84
CBWD1-228ENST00000619157 TMPOP42166 694 aaKnown RBP9.83□□□□□ -0.84
CBWD1-228ENST00000619157 PIP4K2AP48426 406 aaPredicted RBP9.83□□□□□ -0.84
CBWD1-228ENST00000619157 DDR1Q08345 913 aa9.83□□□□□ -0.84
CBWD1-228ENST00000619157 RTF1Q92541 710 aaKnown RBP9.83□□□□□ -0.84
CBWD1-228ENST00000619157 COL15A1P39059 1388 aa9.83□□□□□ -0.84
CBWD1-228ENST00000619157 EIF5P55010 431 aaKnown RBP9.82□□□□□ -0.84
CBWD1-228ENST00000619157 EHHADHQ08426 723 aa9.82□□□□□ -0.84
CBWD1-228ENST00000619157 TAF7Q15545 349 aaPredicted RBP9.82□□□□□ -0.84
CBWD1-228ENST00000619157 SEZ6L2Q6UXD5 910 aa9.82□□□□□ -0.84
CBWD1-228ENST00000619157 TRIM56Q9BRZ2 755 aaKnown RBP9.82□□□□□ -0.84
CBWD1-228ENST00000619157 ZFYVE28Q9HCC9 887 aa9.82□□□□□ -0.84
CBWD1-228ENST00000619157 C10orf71Q711Q0 1435 aa9.82□□□□□ -0.84
CBWD1-228ENST00000619157 MAPK8IP3Q9UPT6 1336 aa9.82□□□□□ -0.84
CBWD1-228ENST00000619157 FZD6O60353 706 aa9.81□□□□□ -0.84
CBWD1-228ENST00000619157 CANXP27824 592 aaKnown RBP9.81□□□□□ -0.84
CBWD1-228ENST00000619157 TM4SF1P30408 202 aa9.81□□□□□ -0.84
CBWD1-228ENST00000619157 RFC4P35249 363 aa9.81□□□□□ -0.84
CBWD1-228ENST00000619157 RIPK4P57078 832 aa9.81□□□□□ -0.84
CBWD1-228ENST00000619157 USPL1Q5W0Q7 1092 aa9.81□□□□□ -0.84
CBWD1-228ENST00000619157 CORO1BQ9BR76 489 aa9.81□□□□□ -0.84
CBWD1-228ENST00000619157 LIN7BQ9HAP6 207 aa9.81□□□□□ -0.84
CBWD1-228ENST00000619157 PXDNLA1KZ92 1463 aa9.8□□□□□ -0.84
CBWD1-228ENST00000619157 A0A1W2PP55 124 aa9.8□□□□□ -0.84
CBWD1-228ENST00000619157 EIF4A1P60842 406 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms