RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, human

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-233	ENST00000618836	POU3F3	P20264	500 aa	Predicted RBP	4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	HTR3A	P46098	478 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	LRRC41	Q15345	812 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	MZT2A	Q6P582	158 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	DZIP1L	Q8IYY4	767 aa	Known RBP	4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	VPS52	Q8N1B4	723 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	GOLGA5	Q8TBA6	731 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	USP33	Q8TEY7	942 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	ZDHHC16	Q969W1	377 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	LRRC45	Q96CN5	670 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	THOC1	Q96FV9	657 aa	Known RBP	4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	RBM18	Q96H35	190 aa	Known RBP	4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	SH3GL1	Q99961	368 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	CENPO	Q9BU64	300 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	LRRCC1	Q9C099	1032 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	HERC5	Q9UII4	1024 aa	Known RBP	4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	FBXO10	Q9UK96	956 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	IPP	Q9Y573	584 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	TIAM2	Q8IVF5	1701 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	KDM6A	O15550	1401 aa	Predicted RBP	4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836		C9IYK1	514 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	BHMG1	C9JSJ3	638 aa	Predicted RBP	4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	TOR1B	O14657	336 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	MUSK	O15146	869 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	LZTS3	O60299	673 aa	Predicted RBP	4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	PIP5K1C	O60331	668 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	FGFR1OP	O95684	399 aa	Known RBP	4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	MRE11	P49959	708 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	PEX5	P50542	639 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	NUCB2	P80303	420 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	MRPL28	Q13084	256 aa	Known RBP	4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	AKNAD1	Q5T1N1	836 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	PPP2R2D	Q66LE6	453 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	TYW1B	Q6NUM6	668 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	FAM117B	Q6P1L5	589 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	SRL	Q86TD4	932 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	TMEM110	Q86TL2	294 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	CPXCR1	Q8N123	301 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	SPATA18	Q8TC71	538 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	MRFAP1L1	Q96HT8	127 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	RBM17	Q96I25	401 aa	Known RBP	4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	NEK1	Q96PY6	1258 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	IRX2	Q9BZI1	471 aa	Predicted RBP	4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	INCENP	Q9NQS7	918 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	METTL5	Q9NRN9	209 aa	Known RBP	4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	SEPT10	Q9P0V9	454 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	ZMIZ1	Q9ULJ6	1067 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	PPP1R9A	Q9ULJ8	1098 aa		4.65	□□□□□ -1.67
UBE2D3-233	ENST00000618836	PPL	O60437	1756 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	PLSCR1	O15162	318 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	DNAJA1	P31689	397 aa	Known RBP	4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	STT3A	P46977	705 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	EPHB1	P54762	984 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	CLDN10	P78369	228 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	SP140	Q13342	867 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	PUM3	Q15397	648 aa	Known RBP	4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	KBTBD12	Q3ZCT8	623 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	WDR44	Q5JSH3	913 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	HABP4	Q5JVS0	413 aa	Known RBP	4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	PPP4R4	Q6NUP7	873 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	C1orf122	Q6ZSJ8	110 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	CEP68	Q76N32	757 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	FAM76A	Q8TAV0	307 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	TSGA13	Q96PP4	275 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	SLK	Q9H2G2	1235 aa	Predicted RBP	4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	TMEM134	Q9H6X4	195 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	DBNDD1	Q9H9R9	158 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	PRDM6	Q9NQX0	595 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	TFIP11	Q9UBB9	837 aa	Known RBP	4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	LUC7L2	Q9Y383	392 aa	Known RBP	4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	SNCAIP	Q9Y6H5	919 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	CGNL1	Q0VF96	1302 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	ERBB4	Q15303	1308 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	STAM2	O75886	525 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	INMT	O95050	263 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	SLFN14	P0C7P3	912 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	EPB42	P16452	691 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	ADD2	P35612	726 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	DDIT3	P35638	169 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	PRPH	P41219	470 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	TNNT3	P45378	269 aa	Predicted RBP	4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	SERPINB4	P48594	390 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	TAF1C	Q15572	869 aa	Predicted RBP	4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	GNPTAB	Q3T906	1256 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	SWSAP1	Q6NVH7	229 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	HIBCH	Q6NVY1	386 aa	Predicted RBP	4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	C14orf80	Q86SX3	495 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	DEPDC4	Q8N2C3	294 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	LINC00469	Q8N7U9	141 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	ARL10	Q8N8L6	244 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	USP6NL	Q92738	828 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	HVCN1	Q96D96	273 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	THAP11	Q96EK4	314 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	RASSF4	Q9H2L5	321 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	CNTN3	Q9P232	1028 aa		4.64	□□□□□ -1.67
UBE2D3-233	ENST00000618836	RASA4B	C9J798	803 aa		4.63	□□□□□ -1.67
UBE2D3-233	ENST00000618836		K7ELQ4	463 aa	Predicted RBP	4.63	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms