RNA–Protein interactions for RNA: ENST00000617128.1

SNORD3B-1-202, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

Gene SNORD3B-1, Length 218 nt, Biotype snoRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-202ENST00000617128 PRRT2Q7Z6L0 340 aaPredicted RBP12.78□□□□□ -0.36
SNORD3B-1-202ENST00000617128 GTF3C2Q8WUA4 911 aaPredicted RBP12.78□□□□□ -0.36
SNORD3B-1-202ENST00000617128 NCOA5Q9HCD5 579 aaKnown RBP12.78□□□□□ -0.36
SNORD3B-1-202ENST00000617128 GPCPD1Q9NPB8 672 aa12.78□□□□□ -0.36
SNORD3B-1-202ENST00000617128 CREBZFQ9NS37 354 aa12.78□□□□□ -0.36
SNORD3B-1-202ENST00000617128 HOXC10Q9NYD6 342 aa12.78□□□□□ -0.36
SNORD3B-1-202ENST00000617128 MGAMO43451 1857 aa12.78□□□□□ -0.36
SNORD3B-1-202ENST00000617128 TCHHQ07283 1943 aa12.78□□□□□ -0.36
SNORD3B-1-202ENST00000617128 PTPDC1A2A3K4 754 aa12.77□□□□□ -0.37
SNORD3B-1-202ENST00000617128 VCAM1P19320 739 aa12.77□□□□□ -0.37
SNORD3B-1-202ENST00000617128 ADD1P35611 737 aaKnown RBP12.77□□□□□ -0.37
SNORD3B-1-202ENST00000617128 IRX3P78415 501 aaPredicted RBP12.77□□□□□ -0.37
SNORD3B-1-202ENST00000617128 FMR1Q06787 632 aaKnown RBP eCLIP12.77□□□□□ -0.37
SNORD3B-1-202ENST00000617128 SREBF2Q12772 1141 aa12.77□□□□□ -0.37
SNORD3B-1-202ENST00000617128 FAM83BQ5T0W9 1011 aa12.77□□□□□ -0.37
SNORD3B-1-202ENST00000617128 SPRYD7Q5W111 196 aa12.77□□□□□ -0.37
SNORD3B-1-202ENST00000617128 KCTD1Q719H9 257 aa12.77□□□□□ -0.37
SNORD3B-1-202ENST00000617128 SPICE1Q8N0Z3 855 aa12.77□□□□□ -0.37
SNORD3B-1-202ENST00000617128 SLF1Q9BQI6 1058 aa12.77□□□□□ -0.37
SNORD3B-1-202ENST00000617128 SLC26A6Q9BXS9 759 aa12.77□□□□□ -0.37
SNORD3B-1-202ENST00000617128 ZCCHC17Q9NP64 241 aaKnown RBP12.77□□□□□ -0.37
SNORD3B-1-202ENST00000617128 ORC3Q9UBD5 711 aaPredicted RBP12.77□□□□□ -0.37
SNORD3B-1-202ENST00000617128 AGTPBP1Q9UPW5 1226 aa12.77□□□□□ -0.37
SNORD3B-1-202ENST00000617128 SLC45A1Q9Y2W3 748 aa12.77□□□□□ -0.37
SNORD3B-1-202ENST00000617128 FRMPD2Q68DX3 1309 aaPredicted RBP12.77□□□□□ -0.37
SNORD3B-1-202ENST00000617128 ZBED4O75132 1171 aa12.76□□□□□ -0.37
SNORD3B-1-202ENST00000617128 FLOT1O75955 427 aa12.76□□□□□ -0.37
SNORD3B-1-202ENST00000617128 GOLGA8HP0CJ92 632 aa12.76□□□□□ -0.37
SNORD3B-1-202ENST00000617128 CDC27P30260 824 aa12.76□□□□□ -0.37
SNORD3B-1-202ENST00000617128 COG2Q14746 738 aa12.76□□□□□ -0.37
SNORD3B-1-202ENST00000617128 SYDE2Q5VT97 1194 aa12.76□□□□□ -0.37
SNORD3B-1-202ENST00000617128 PAXIP1Q6ZW49 1069 aaPredicted RBP12.76□□□□□ -0.37
SNORD3B-1-202ENST00000617128 CCDC84Q86UT8 332 aaPredicted RBP12.76□□□□□ -0.37
SNORD3B-1-202ENST00000617128 RAB11FIP4Q86YS3 637 aa12.76□□□□□ -0.37
SNORD3B-1-202ENST00000617128 TEX2Q8IWB9 1127 aa12.76□□□□□ -0.37
SNORD3B-1-202ENST00000617128 MB21D1Q8N884 522 aa12.76□□□□□ -0.37
SNORD3B-1-202ENST00000617128 NSUN7Q8NE18 718 aaKnown RBP12.76□□□□□ -0.37
SNORD3B-1-202ENST00000617128 CCDC148Q8NFR7 591 aa12.76□□□□□ -0.37
SNORD3B-1-202ENST00000617128 SMARCC2Q8TAQ2 1214 aa12.76□□□□□ -0.37
SNORD3B-1-202ENST00000617128 GLT8D2Q9H1C3 349 aa12.76□□□□□ -0.37
SNORD3B-1-202ENST00000617128 RPAP3Q9H6T3 665 aaPredicted RBP12.76□□□□□ -0.37
SNORD3B-1-202ENST00000617128 RIOX1Q9H6W3 641 aa12.76□□□□□ -0.37
SNORD3B-1-202ENST00000617128 EMILIN3Q9NT22 766 aa12.76□□□□□ -0.37
SNORD3B-1-202ENST00000617128 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.76□□□□□ -0.37
SNORD3B-1-202ENST00000617128 CNTNAP5Q8WYK1 1306 aa12.76□□□□□ -0.37
SNORD3B-1-202ENST00000617128 PLXNA1Q9UIW2 1896 aa12.76□□□□□ -0.37
SNORD3B-1-202ENST00000617128 SMCHD1A6NHR9 2005 aa12.76□□□□□ -0.37
SNORD3B-1-202ENST00000617128 CCL15-CCL14A0A0B4J2E2 113 aa12.75□□□□□ -0.37
SNORD3B-1-202ENST00000617128 PNMA6FA0A0J9YX94 578 aa12.75□□□□□ -0.37
SNORD3B-1-202ENST00000617128 H3BQV1 296 aa12.75□□□□□ -0.37
SNORD3B-1-202ENST00000617128 PLXNB2O15031 1838 aa12.75□□□□□ -0.37
SNORD3B-1-202ENST00000617128 SLC10A3P09131 477 aa12.75□□□□□ -0.37
SNORD3B-1-202ENST00000617128 GJB2P29033 226 aa12.75□□□□□ -0.37
SNORD3B-1-202ENST00000617128 HOXA7P31268 230 aaPredicted RBP12.75□□□□□ -0.37
SNORD3B-1-202ENST00000617128 NTRK3Q16288 839 aa12.75□□□□□ -0.37
SNORD3B-1-202ENST00000617128 CCL15Q16663 113 aa12.75□□□□□ -0.37
SNORD3B-1-202ENST00000617128 DEFB115Q30KQ5 88 aa12.75□□□□□ -0.37
SNORD3B-1-202ENST00000617128 IFFO2Q5TF58 517 aa12.75□□□□□ -0.37
SNORD3B-1-202ENST00000617128 STAG2Q8N3U4 1231 aa12.75□□□□□ -0.37
SNORD3B-1-202ENST00000617128 BRMS1Q9HCU9 246 aa12.75□□□□□ -0.37
SNORD3B-1-202ENST00000617128 SH3GLB2Q9NR46 395 aa12.75□□□□□ -0.37
SNORD3B-1-202ENST00000617128 FAM217BQ9NTX9 383 aaPredicted RBP12.75□□□□□ -0.37
SNORD3B-1-202ENST00000617128 ZBTB5O15062 677 aa12.74□□□□□ -0.37
SNORD3B-1-202ENST00000617128 PLEKHA8P1O95397 391 aa12.74□□□□□ -0.37
SNORD3B-1-202ENST00000617128 SCG2P13521 617 aa12.74□□□□□ -0.37
SNORD3B-1-202ENST00000617128 CALML3P27482 149 aa12.74□□□□□ -0.37
SNORD3B-1-202ENST00000617128 NUCB2P80303 420 aa12.74□□□□□ -0.37
SNORD3B-1-202ENST00000617128 NOGQ13253 232 aa12.74□□□□□ -0.37
SNORD3B-1-202ENST00000617128 SAFBQ15424 915 aaKnown RBP eCLIP12.74□□□□□ -0.37
SNORD3B-1-202ENST00000617128 PFKFB3Q16875 520 aaPredicted RBP12.74□□□□□ -0.37
SNORD3B-1-202ENST00000617128 LARP1BQ659C4 914 aaKnown RBP12.74□□□□□ -0.37
SNORD3B-1-202ENST00000617128 GALNT17Q6IS24 598 aa12.74□□□□□ -0.37
SNORD3B-1-202ENST00000617128 CATSPERGQ6ZRH7 1159 aa12.74□□□□□ -0.37
SNORD3B-1-202ENST00000617128 ANKRD23Q86SG2 305 aa12.74□□□□□ -0.37
SNORD3B-1-202ENST00000617128 RASAL3Q86YV0 1011 aa12.74□□□□□ -0.37
SNORD3B-1-202ENST00000617128 ADGRF4Q8IZF3 695 aa12.74□□□□□ -0.37
SNORD3B-1-202ENST00000617128 CCDC82Q8N4S0 544 aa12.74□□□□□ -0.37
SNORD3B-1-202ENST00000617128 SRBD1Q8N5C6 995 aaKnown RBP12.74□□□□□ -0.37
SNORD3B-1-202ENST00000617128 KIFC2Q96AC6 838 aa12.74□□□□□ -0.37
SNORD3B-1-202ENST00000617128 AMNQ9BXJ7 453 aa12.74□□□□□ -0.37
SNORD3B-1-202ENST00000617128 VAT1LQ9HCJ6 419 aa12.74□□□□□ -0.37
SNORD3B-1-202ENST00000617128 PPP1R9AQ9ULJ8 1098 aa12.74□□□□□ -0.37
SNORD3B-1-202ENST00000617128 PRR12Q9ULL5 1215 aa12.74□□□□□ -0.37
SNORD3B-1-202ENST00000617128 CIZ1Q9ULV3 898 aaPredicted RBP12.74□□□□□ -0.37
SNORD3B-1-202ENST00000617128 V9GY48 417 aaPredicted RBP12.74□□□□□ -0.37
SNORD3B-1-202ENST00000617128 MYH7BA7E2Y1 1941 aa12.74□□□□□ -0.37
SNORD3B-1-202ENST00000617128 RASSF10A6NK89 507 aa12.73□□□□□ -0.37
SNORD3B-1-202ENST00000617128 ALDH1A1P00352 501 aa12.73□□□□□ -0.37
SNORD3B-1-202ENST00000617128 COPB2P35606 906 aa12.73□□□□□ -0.37
SNORD3B-1-202ENST00000617128 OAZ1P54368 228 aa12.73□□□□□ -0.37
SNORD3B-1-202ENST00000617128 MCTP2Q6DN12 878 aa12.73□□□□□ -0.37
SNORD3B-1-202ENST00000617128 PPP1R18Q6NYC8 613 aa12.73□□□□□ -0.37
SNORD3B-1-202ENST00000617128 NBPF11Q86T75 865 aa12.73□□□□□ -0.37
SNORD3B-1-202ENST00000617128 FBXO11Q86XK2 927 aa12.73□□□□□ -0.37
SNORD3B-1-202ENST00000617128 HOMER1Q86YM7 354 aa12.73□□□□□ -0.37
SNORD3B-1-202ENST00000617128 POTEDQ86YR6 584 aa12.73□□□□□ -0.37
SNORD3B-1-202ENST00000617128 BICD2Q8TD16 824 aa12.73□□□□□ -0.37
SNORD3B-1-202ENST00000617128 PHKBQ93100 1093 aa12.73□□□□□ -0.37
SNORD3B-1-202ENST00000617128 DDX11Q96FC9 970 aa12.73□□□□□ -0.37
SNORD3B-1-202ENST00000617128 C8orf76Q96K31 380 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms