RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 CMA1P23946 247 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 SYKP43405 635 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 NAPAP54920 295 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 FKBP1AP62942 108 aaKnown RBP8.93□□□□□ -0.98
NEK3-207ENST00000617054 PTGDRQ13258 359 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 PNOCQ13519 176 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 ZYXQ15942 572 aaKnown RBP8.93□□□□□ -0.98
NEK3-207ENST00000617054 INF2Q27J81 1249 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 PRAMEF18Q5VWM3 479 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 BLIDQ8IZY5 108 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 KRI1Q8N9T8 703 aaKnown RBP8.93□□□□□ -0.98
NEK3-207ENST00000617054 MRIQ9BWK5 157 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 SWAP70Q9UH65 585 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 FOCADQ5VW36 1801 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 A0A1W2PQ27 194 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 A0A1W2PQ64 194 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 A0A1W2PQD8 194 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 VWA3AA6NCI4 1184 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 TRIM75PA6NK02 468 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 USP17L10C9JJH3 530 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 CASP1P29466 404 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 ECE1P42892 770 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 HDLBPQ00341 1268 aaKnown RBP8.92□□□□□ -0.98
NEK3-207ENST00000617054 CCDC178Q5BJE1 867 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 CCDC125Q86Z20 511 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 ADGRF4Q8IZF3 695 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 SGIP1Q9BQI5 828 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 DHX36Q9H2U1 1008 aaKnown RBP8.92□□□□□ -0.98
NEK3-207ENST00000617054 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.92□□□□□ -0.98
NEK3-207ENST00000617054 CBX8Q9HC52 389 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 BRMS1Q9HCU9 246 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 TMEM260Q9NX78 707 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 FBXO2Q9UK22 296 aaPredicted RBP8.92□□□□□ -0.98
NEK3-207ENST00000617054 SMCO2A6NFE2 343 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 POLR2DO15514 142 aaKnown RBP8.92□□□□□ -0.98
NEK3-207ENST00000617054 PPP6R2O75170 966 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 ABCB5Q2M3G0 1257 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 TBC1D10BQ4KMP7 808 aaPredicted RBP8.92□□□□□ -0.98
NEK3-207ENST00000617054 JAKMIP3Q5VZ66 844 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 STAMQ92783 540 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 BARHL2Q9NY43 387 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 PCDHA6Q9UN73 950 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 PCDHA8Q9Y5H6 950 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 QSER1Q2KHR3 1735 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 MYH8P13535 1937 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 A0A1W2PRG0 241 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 TESPA1A2RU30 521 aaPredicted RBP8.92□□□□□ -0.98
NEK3-207ENST00000617054 PPP1R11O60927 126 aaPredicted RBP8.92□□□□□ -0.98
NEK3-207ENST00000617054 GNAQP50148 359 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 IL17AQ16552 155 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 TTC38Q5R3I4 469 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 CIAPIN1Q6FI81 312 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 RRP36Q96EU6 259 aaKnown RBP8.92□□□□□ -0.98
NEK3-207ENST00000617054 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.92□□□□□ -0.98
NEK3-207ENST00000617054 SEC63Q9UGP8 760 aaKnown RBP8.92□□□□□ -0.98
NEK3-207ENST00000617054 HDAC9Q9UKV0 1011 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 KCNH3Q9ULD8 1083 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 PCDHA4Q9UN74 947 aa8.92□□□□□ -0.98
NEK3-207ENST00000617054 ZNF646O15015 1829 aaPredicted RBP8.91□□□□□ -0.98
NEK3-207ENST00000617054 A0A087X0B3 334 aa8.91□□□□□ -0.98
NEK3-207ENST00000617054 ZNF165P49910 485 aa8.91□□□□□ -0.98
NEK3-207ENST00000617054 ICA1Q05084 483 aa8.91□□□□□ -0.98
NEK3-207ENST00000617054 RESP18Q5W5W9 173 aa8.91□□□□□ -0.98
NEK3-207ENST00000617054 RBM43Q6ZSC3 357 aaKnown RBP8.91□□□□□ -0.98
NEK3-207ENST00000617054 TRIM44Q96DX7 344 aaPredicted RBP8.91□□□□□ -0.98
NEK3-207ENST00000617054 POM121Q96HA1 1249 aa8.91□□□□□ -0.98
NEK3-207ENST00000617054 ZNF830Q96NB3 372 aaPredicted RBP8.91□□□□□ -0.98
NEK3-207ENST00000617054 JMJD4Q9H9V9 463 aa8.91□□□□□ -0.98
NEK3-207ENST00000617054 CENPFP49454 3210 aa8.91□□□□□ -0.98
NEK3-207ENST00000617054 ADCY5O95622 1261 aa8.91□□□□□ -0.98
NEK3-207ENST00000617054 PTPREP23469 700 aa8.91□□□□□ -0.98
NEK3-207ENST00000617054 SLC1A4P43007 532 aa8.91□□□□□ -0.98
NEK3-207ENST00000617054 NOVP48745 357 aa8.91□□□□□ -0.98
NEK3-207ENST00000617054 ZNF543Q08ER8 600 aa8.91□□□□□ -0.98
NEK3-207ENST00000617054 DGKZQ13574 1117 aa8.91□□□□□ -0.98
NEK3-207ENST00000617054 ZRSR1Q15695 479 aaKnown RBP8.91□□□□□ -0.98
NEK3-207ENST00000617054 FOXP4Q8IVH2 680 aaPredicted RBP8.91□□□□□ -0.98
NEK3-207ENST00000617054 JMYQ8N9B5 988 aa8.91□□□□□ -0.98
NEK3-207ENST00000617054 ACER1Q8TDN7 264 aa8.91□□□□□ -0.98
NEK3-207ENST00000617054 PLIN2Q99541 437 aa8.91□□□□□ -0.98
NEK3-207ENST00000617054 GLIS2Q9BZE0 524 aaPredicted RBP8.91□□□□□ -0.98
NEK3-207ENST00000617054 MYOZ2Q9NPC6 264 aa8.91□□□□□ -0.98
NEK3-207ENST00000617054 TMOD2Q9NZR1 351 aa8.91□□□□□ -0.98
NEK3-207ENST00000617054 CNTNAP1P78357 1384 aa8.91□□□□□ -0.98
NEK3-207ENST00000617054 IKQ13123 557 aaPredicted RBP8.9□□□□□ -0.98
NEK3-207ENST00000617054 UBE2SQ16763 222 aa8.9□□□□□ -0.98
NEK3-207ENST00000617054 DPCR1Q3MIW9 517 aa8.9□□□□□ -0.98
NEK3-207ENST00000617054 KIAA1755Q5JYT7 1200 aa8.9□□□□□ -0.98
NEK3-207ENST00000617054 TATDN1Q6P1N9 297 aa8.9□□□□□ -0.98
NEK3-207ENST00000617054 DLK2Q6UY11 383 aa8.9□□□□□ -0.98
NEK3-207ENST00000617054 GJA10Q969M2 543 aa8.9□□□□□ -0.98
NEK3-207ENST00000617054 EHD4Q9H223 541 aa8.9□□□□□ -0.98
NEK3-207ENST00000617054 SERTAD1Q9UHV2 236 aa8.9□□□□□ -0.98
NEK3-207ENST00000617054 HPSEQ9Y251 543 aa8.9□□□□□ -0.98
NEK3-207ENST00000617054 SIPA1L1O43166 1804 aa8.9□□□□□ -0.98
NEK3-207ENST00000617054 CCDC194A0A1B0GVG4 234 aa8.9□□□□□ -0.98
NEK3-207ENST00000617054 PP2D1A8MPX8 630 aa8.9□□□□□ -0.98
NEK3-207ENST00000617054 F5H6K3 240 aa8.9□□□□□ -0.98
NEK3-207ENST00000617054 CUTAO60888 179 aa8.9□□□□□ -0.98
NEK3-207ENST00000617054 PRR29P0C7W0 189 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms