RNA–Protein interactions for RNA: ENST00000617022.4

DDB2-212, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 2,181 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-212ENST00000617022 SCN4AP35499 1836 aa18.36■□□□□ 0.53
DDB2-212ENST00000617022 DNTTIP2Q5QJE6 756 aaKnown RBP18.36■□□□□ 0.53
DDB2-212ENST00000617022 TTBK2Q6IQ55 1244 aa18.36■□□□□ 0.53
DDB2-212ENST00000617022 SHISA4Q96DD7 197 aa18.36■□□□□ 0.53
DDB2-212ENST00000617022 WRNIP1Q96S55 665 aa18.36■□□□□ 0.53
DDB2-212ENST00000617022 GLIS2Q9BZE0 524 aaPredicted RBP18.36■□□□□ 0.53
DDB2-212ENST00000617022 VAT1LQ9HCJ6 419 aa18.36■□□□□ 0.53
DDB2-212ENST00000617022 KCNJ14Q9UNX9 436 aa18.36■□□□□ 0.53
DDB2-212ENST00000617022 CTNND1O60716 968 aaKnown RBP18.35■□□□□ 0.53
DDB2-212ENST00000617022 NDUFB10O96000 172 aa18.35■□□□□ 0.53
DDB2-212ENST00000617022 SLC1A4P43007 532 aa18.35■□□□□ 0.53
DDB2-212ENST00000617022 DNM1Q05193 864 aaKnown RBP18.35■□□□□ 0.53
DDB2-212ENST00000617022 SUPT20HL1Q3ZLR7 823 aa18.35■□□□□ 0.53
DDB2-212ENST00000617022 SPZ1Q9BXG8 430 aa18.35■□□□□ 0.53
DDB2-212ENST00000617022 WDR90Q96KV7 1748 aa18.35■□□□□ 0.53
DDB2-212ENST00000617022 ZYXQ15942 572 aaKnown RBP18.35■□□□□ 0.53
DDB2-212ENST00000617022 HOMER1Q86YM7 354 aa18.35■□□□□ 0.53
DDB2-212ENST00000617022 SPICE1Q8N0Z3 855 aa18.35■□□□□ 0.53
DDB2-212ENST00000617022 GMCL1P1Q8NEA9 526 aa18.35■□□□□ 0.53
DDB2-212ENST00000617022 ZKSCAN4Q969J2 545 aaPredicted RBP18.35■□□□□ 0.53
DDB2-212ENST00000617022 NUP88Q99567 741 aaPredicted RBP18.35■□□□□ 0.53
DDB2-212ENST00000617022 ZSCAN16Q9H4T2 348 aaPredicted RBP18.35■□□□□ 0.53
DDB2-212ENST00000617022 KIF28PB7ZC32 967 aa18.34■□□□□ 0.53
DDB2-212ENST00000617022 SCG2P13521 617 aa18.34■□□□□ 0.53
DDB2-212ENST00000617022 PFKFB3Q16875 520 aaPredicted RBP18.34■□□□□ 0.53
DDB2-212ENST00000617022 GPATCH4Q5T3I0 446 aaKnown RBP18.34■□□□□ 0.53
DDB2-212ENST00000617022 USP48Q86UV5 1035 aa18.34■□□□□ 0.53
DDB2-212ENST00000617022 ZC3H15Q8WU90 426 aaKnown RBP18.34■□□□□ 0.53
DDB2-212ENST00000617022 DCAF4Q8WV16 495 aa18.34■□□□□ 0.53
DDB2-212ENST00000617022 GDPD2Q9HCC8 539 aa18.34■□□□□ 0.53
DDB2-212ENST00000617022 CNPY2Q9Y2B0 182 aa18.34■□□□□ 0.53
DDB2-212ENST00000617022 TMX2Q9Y320 296 aa18.34■□□□□ 0.53
DDB2-212ENST00000617022 SLC16A2P36021 539 aa18.34■□□□□ 0.53
DDB2-212ENST00000617022 KIF23Q02241 960 aaPredicted RBP18.34■□□□□ 0.53
DDB2-212ENST00000617022 NOLC1Q14978 699 aaKnown RBP eCLIP18.34■□□□□ 0.53
DDB2-212ENST00000617022 KIAA1755Q5JYT7 1200 aa18.34■□□□□ 0.53
DDB2-212ENST00000617022 GPKOWQ92917 476 aaPredicted RBP eCLIP18.34■□□□□ 0.53
DDB2-212ENST00000617022 TSPY26PQ9H489 355 aa18.34■□□□□ 0.53
DDB2-212ENST00000617022 ZNF112Q9UJU3 913 aa18.34■□□□□ 0.53
DDB2-212ENST00000617022 MMP1P03956 469 aa18.33■□□□□ 0.52
DDB2-212ENST00000617022 POTEIP0CG38 1075 aa18.33■□□□□ 0.52
DDB2-212ENST00000617022 POTEJP0CG39 1038 aa18.33■□□□□ 0.52
DDB2-212ENST00000617022 KLRG1Q96E93 195 aa18.33■□□□□ 0.52
DDB2-212ENST00000617022 PIGSQ96S52 555 aa18.33■□□□□ 0.52
DDB2-212ENST00000617022 SPTLC3Q9NUV7 552 aa18.33■□□□□ 0.52
DDB2-212ENST00000617022 XBP1P17861 261 aa18.32■□□□□ 0.52
DDB2-212ENST00000617022 UVSSAQ2YD98 709 aa18.32■□□□□ 0.52
DDB2-212ENST00000617022 PNMA8AQ86V59 439 aaPredicted RBP18.32■□□□□ 0.52
DDB2-212ENST00000617022 RGS22Q8NE09 1264 aa18.32■□□□□ 0.52
DDB2-212ENST00000617022 RIOX1Q9H6W3 641 aa18.32■□□□□ 0.52
DDB2-212ENST00000617022 SYNPO2Q9UMS6 1093 aa18.32■□□□□ 0.52
DDB2-212ENST00000617022 SMARCA1P28370 1054 aa18.32■□□□□ 0.52
DDB2-212ENST00000617022 SCYL3Q8IZE3 742 aa18.32■□□□□ 0.52
DDB2-212ENST00000617022 RRP36Q96EU6 259 aaKnown RBP18.32■□□□□ 0.52
DDB2-212ENST00000617022 GMCL1Q96IK5 515 aa18.32■□□□□ 0.52
DDB2-212ENST00000617022 DOCK1Q14185 1865 aa18.32■□□□□ 0.52
DDB2-212ENST00000617022 TCHHQ07283 1943 aa18.31■□□□□ 0.52
DDB2-212ENST00000617022 FIBPO43427 364 aa18.31■□□□□ 0.52
DDB2-212ENST00000617022 BMP3P12645 472 aa18.31■□□□□ 0.52
DDB2-212ENST00000617022 GNL2Q13823 731 aaKnown RBP18.31■□□□□ 0.52
DDB2-212ENST00000617022 HEATR3Q7Z4Q2 680 aa18.31■□□□□ 0.52
DDB2-212ENST00000617022 DIS3L2Q8IYB7 885 aaKnown RBP18.31■□□□□ 0.52
DDB2-212ENST00000617022 ADGRF4Q8IZF3 695 aa18.31■□□□□ 0.52
DDB2-212ENST00000617022 FEZ1Q99689 392 aa18.31■□□□□ 0.52
DDB2-212ENST00000617022 GOPCQ9HD26 462 aa18.31■□□□□ 0.52
DDB2-212ENST00000617022 CLEC11AQ9Y240 323 aa18.31■□□□□ 0.52
DDB2-212ENST00000617022 BTBD18B2RXH4 712 aa18.31■□□□□ 0.52
DDB2-212ENST00000617022 USP2O75604 605 aaPredicted RBP18.31■□□□□ 0.52
DDB2-212ENST00000617022 WWC2Q6AWC2 1192 aa18.31■□□□□ 0.52
DDB2-212ENST00000617022 SYAP1Q96A49 352 aaPredicted RBP18.31■□□□□ 0.52
DDB2-212ENST00000617022 CDCA5Q96FF9 252 aa18.31■□□□□ 0.52
DDB2-212ENST00000617022 PHF20Q9BVI0 1012 aa18.31■□□□□ 0.52
DDB2-212ENST00000617022 SH2D4AQ9H788 454 aa18.31■□□□□ 0.52
DDB2-212ENST00000617022 VCPKMTQ9H867 229 aa18.31■□□□□ 0.52
DDB2-212ENST00000617022 JMJD4Q9H9V9 463 aa18.31■□□□□ 0.52
DDB2-212ENST00000617022 RRAGCQ9HB90 399 aa18.31■□□□□ 0.52
DDB2-212ENST00000617022 GINM1Q9NU53 330 aa18.31■□□□□ 0.52
DDB2-212ENST00000617022 TFIP11Q9UBB9 837 aaKnown RBP18.31■□□□□ 0.52
DDB2-212ENST00000617022 SEC63Q9UGP8 760 aaKnown RBP18.31■□□□□ 0.52
DDB2-212ENST00000617022 SAFBQ15424 915 aaKnown RBP eCLIP18.3■□□□□ 0.52
DDB2-212ENST00000617022 TYW1BQ6NUM6 668 aa18.3■□□□□ 0.52
DDB2-212ENST00000617022 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.3■□□□□ 0.52
DDB2-212ENST00000617022 OXER1Q8TDS5 423 aa18.3■□□□□ 0.52
DDB2-212ENST00000617022 DCAF8L1A6NGE4 600 aa18.3■□□□□ 0.52
DDB2-212ENST00000617022 USP17L10C9JJH3 530 aa18.3■□□□□ 0.52
DDB2-212ENST00000617022 TMEM232C9JQI7 657 aa18.3■□□□□ 0.52
DDB2-212ENST00000617022 KRT85P78386 507 aa18.3■□□□□ 0.52
DDB2-212ENST00000617022 PDCL2Q8N4E4 241 aa18.3■□□□□ 0.52
DDB2-212ENST00000617022 PICK1Q9NRD5 415 aa18.3■□□□□ 0.52
DDB2-212ENST00000617022 PTPRAP18433 802 aa18.29■□□□□ 0.52
DDB2-212ENST00000617022 IKQ13123 557 aaPredicted RBP18.29■□□□□ 0.52
DDB2-212ENST00000617022 NR5A1Q13285 461 aa18.29■□□□□ 0.52
DDB2-212ENST00000617022 DGKZQ13574 1117 aa18.29■□□□□ 0.52
DDB2-212ENST00000617022 FAM83BQ5T0W9 1011 aa18.29■□□□□ 0.52
DDB2-212ENST00000617022 RNF214Q8ND24 703 aa18.29■□□□□ 0.52
DDB2-212ENST00000617022 U2AF2P26368 475 aaKnown RBP eCLIP18.28■□□□□ 0.521e-6■■□□□ 12.7
DDB2-212ENST00000617022 NLRP5P59047 1200 aa18.28■□□□□ 0.52
DDB2-212ENST00000617022 BRAPQ7Z569 592 aa18.28■□□□□ 0.52
DDB2-212ENST00000617022 TSC1Q92574 1164 aa18.28■□□□□ 0.52
DDB2-212ENST00000617022 FTOQ9C0B1 505 aaKnown RBP eCLIP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms