RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 LMNB1P20700 586 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 GRIK3Q13003 919 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 COL9A3Q14050 684 aaPredicted RBP9.98□□□□□ -0.81
VPS11-206ENST00000614944 APOA5Q6Q788 366 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 LEKR1Q6ZMV7 388 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 DRAXINQ8NBI3 349 aaPredicted RBP9.98□□□□□ -0.81
VPS11-206ENST00000614944 ARMC2Q8NEN0 867 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 NLGN2Q8NFZ4 835 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 KCNQ5Q9NR82 932 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 BLOC1S6Q9UL45 172 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 FRMD4BQ9Y2L6 1034 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.98□□□□□ -0.81
VPS11-206ENST00000614944 SCN4AP35499 1836 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 AP1G2O75843 785 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 USP17L8P0C7I0 530 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 ELF1P32519 619 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 SCRN1Q12765 414 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 FOXD4Q12950 439 aaPredicted RBP9.97□□□□□ -0.81
VPS11-206ENST00000614944 NAA30Q147X3 362 aaPredicted RBP9.97□□□□□ -0.81
VPS11-206ENST00000614944 CFAP100Q494V2 611 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 ARMC3Q5W041 872 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 ILDR2Q71H61 639 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 MYLK4Q86YV6 388 aaPredicted RBP9.97□□□□□ -0.81
VPS11-206ENST00000614944 CCDC112Q8NEF3 446 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 SMARCE1Q969G3 411 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 LARP6Q9BRS8 491 aaKnown RBP9.97□□□□□ -0.81
VPS11-206ENST00000614944 WDR90Q96KV7 1748 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 HLA-DOAP06340 250 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 WTAPQ15007 396 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 SLC5A9Q2M3M2 681 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 TMEM67Q5HYA8 995 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 TATDN1Q6P1N9 297 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 CCDC34Q96HJ3 373 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 JAG2Q9Y219 1238 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 RASA1P20936 1047 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 EIF6P56537 245 aaKnown RBP9.97□□□□□ -0.81
VPS11-206ENST00000614944 ICA1Q05084 483 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 RASA3Q14644 834 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 NCAPG2Q86XI2 1143 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 OGFOD1Q8N543 542 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 NSUN7Q8NE18 718 aaKnown RBP9.97□□□□□ -0.81
VPS11-206ENST00000614944 CXorf38Q8TB03 319 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 KIAA1524Q8TCG1 905 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 FAM151AQ8WW52 585 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 FAM198AQ9UFP1 575 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 PGAP2Q9UHJ9 254 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 HERC5Q9UII4 1024 aaKnown RBP9.97□□□□□ -0.81
VPS11-206ENST00000614944 BCS1LQ9Y276 419 aa9.97□□□□□ -0.81
VPS11-206ENST00000614944 MINDY4BA8MYZ0 360 aa9.96□□□□□ -0.81
VPS11-206ENST00000614944 SNUPNO95149 360 aaKnown RBP9.96□□□□□ -0.81
VPS11-206ENST00000614944 GCFC2P16383 781 aaKnown RBP9.96□□□□□ -0.81
VPS11-206ENST00000614944 CDK8P49336 464 aa9.96□□□□□ -0.81
VPS11-206ENST00000614944 CDC37Q16543 378 aaPredicted RBP9.96□□□□□ -0.81
VPS11-206ENST00000614944 HHATQ5VTY9 493 aa9.96□□□□□ -0.81
VPS11-206ENST00000614944 APBB1IPQ7Z5R6 666 aaPredicted RBP9.96□□□□□ -0.81
VPS11-206ENST00000614944 GPC2Q8N158 579 aa9.96□□□□□ -0.81
VPS11-206ENST00000614944 UBAC1Q9BSL1 405 aa9.96□□□□□ -0.81
VPS11-206ENST00000614944 FHDC1Q9C0D6 1143 aaPredicted RBP9.96□□□□□ -0.81
VPS11-206ENST00000614944 PI4KBQ9UBF8 816 aa9.96□□□□□ -0.81
VPS11-206ENST00000614944 SMAPO00193 183 aa9.96□□□□□ -0.82
VPS11-206ENST00000614944 IFIT3O14879 490 aaKnown RBP9.96□□□□□ -0.82
VPS11-206ENST00000614944 POLR3GO15318 223 aaPredicted RBP9.96□□□□□ -0.82
VPS11-206ENST00000614944 POLR3DP05423 398 aaPredicted RBP9.96□□□□□ -0.82
VPS11-206ENST00000614944 APOBRQ0VD83 1088 aa9.96□□□□□ -0.82
VPS11-206ENST00000614944 NEDD9Q14511 834 aa9.96□□□□□ -0.82
VPS11-206ENST00000614944 MCM6Q14566 821 aa9.96□□□□□ -0.82
VPS11-206ENST00000614944 FBXO38Q6PIJ6 1188 aa9.96□□□□□ -0.82
VPS11-206ENST00000614944 KCTD17Q8N5Z5 321 aa9.96□□□□□ -0.82
VPS11-206ENST00000614944 SYT17Q9BSW7 474 aa9.96□□□□□ -0.82
VPS11-206ENST00000614944 MMTAG2Q9BU76 263 aaKnown RBP9.96□□□□□ -0.82
VPS11-206ENST00000614944 DDX4Q9NQI0 724 aaKnown RBP9.96□□□□□ -0.82
VPS11-206ENST00000614944 PPP2R3BQ9Y5P8 575 aa9.96□□□□□ -0.82
VPS11-206ENST00000614944 TNKSO95271 1327 aa9.96□□□□□ -0.82
VPS11-206ENST00000614944 KLF18A0A0U1RQI7 1052 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 CTDNEP1O95476 244 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 IMPDH2P12268 514 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 IFNAR1P17181 557 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 RDXP35241 583 aaKnown RBP9.95□□□□□ -0.82
VPS11-206ENST00000614944 PRELPP51888 382 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 CORO7P57737 925 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 MAPKAPK5Q8IW41 473 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 CCDC83Q8IWF9 413 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 ENAHQ8N8S7 591 aaPredicted RBP9.95□□□□□ -0.82
VPS11-206ENST00000614944 MXD3Q9BW11 206 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 RBM27Q9P2N5 1060 aaKnown RBP9.95□□□□□ -0.82
VPS11-206ENST00000614944 ZNF219Q9P2Y4 722 aaPredicted RBP9.95□□□□□ -0.82
VPS11-206ENST00000614944 PITPNM2Q9BZ72 1349 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 ATAD5Q96QE3 1844 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 CNTNAP1P78357 1384 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 CCDC69A6NI79 296 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 ZBTB43O43298 467 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 PLCD1P51178 756 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 DLGAP5Q15398 846 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 CPLX2Q6PUV4 134 aaKnown RBP9.95□□□□□ -0.82
VPS11-206ENST00000614944 SYNE3Q6ZMZ3 975 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 KIAA0825Q8IV33 1275 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 ZSCAN16Q9H4T2 348 aaPredicted RBP9.95□□□□□ -0.82
VPS11-206ENST00000614944 TMOD2Q9NZR1 351 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 SERPINB13Q9UIV8 391 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 BAG4O95429 457 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms