RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 CALCOCO2Q13137 446 aa16.32■□□□□ 0.2
SNPH-203ENST00000614659 KCNJ12Q14500 433 aa16.32■□□□□ 0.2
SNPH-203ENST00000614659 C17orf53Q8N3J3 647 aaPredicted RBP16.32■□□□□ 0.2
SNPH-203ENST00000614659 OR8K1Q8NGG5 319 aa16.32■□□□□ 0.2
SNPH-203ENST00000614659 FBF1Q8TES7 1133 aa16.32■□□□□ 0.2
SNPH-203ENST00000614659 GSDMAQ96QA5 445 aa16.32■□□□□ 0.2
SNPH-203ENST00000614659 PABPN1LA6NDY0 278 aaKnown RBP16.32■□□□□ 0.2
SNPH-203ENST00000614659 MYL1P05976 194 aa16.32■□□□□ 0.2
SNPH-203ENST00000614659 MYCLP12524 364 aaPredicted RBP16.32■□□□□ 0.2
SNPH-203ENST00000614659 TNFAIP3P21580 790 aa16.32■□□□□ 0.2
SNPH-203ENST00000614659 PTPN12Q05209 780 aaKnown RBP16.32■□□□□ 0.2
SNPH-203ENST00000614659 ETF1P62495 437 aaKnown RBP16.31■□□□□ 0.2
SNPH-203ENST00000614659 ERFEQ4G0M1 354 aa16.31■□□□□ 0.2
SNPH-203ENST00000614659 SFMBT2Q5VUG0 894 aa16.31■□□□□ 0.2
SNPH-203ENST00000614659 ZNF589Q86UQ0 364 aaPredicted RBP16.31■□□□□ 0.2
SNPH-203ENST00000614659 UBL4BQ8N7F7 174 aa16.31■□□□□ 0.2
SNPH-203ENST00000614659 PPM1EQ8WY54 764 aa16.31■□□□□ 0.2
SNPH-203ENST00000614659 PPP2R2CQ9Y2T4 447 aa16.31■□□□□ 0.2
SNPH-203ENST00000614659 NRKQ7Z2Y5 1582 aa16.31■□□□□ 0.2
SNPH-203ENST00000614659 hCG_1984214I3L0E3 225 aa16.31■□□□□ 0.2
SNPH-203ENST00000614659 ACTN4O43707 911 aaKnown RBP16.31■□□□□ 0.2
SNPH-203ENST00000614659 FLOT1O75955 427 aa16.31■□□□□ 0.2
SNPH-203ENST00000614659 RESTQ13127 1097 aa16.31■□□□□ 0.2
SNPH-203ENST00000614659 ZNF713Q8N859 430 aaPredicted RBP16.31■□□□□ 0.2
SNPH-203ENST00000614659 IFT81Q8WYA0 676 aa16.31■□□□□ 0.2
SNPH-203ENST00000614659 CLIC4Q9Y696 253 aa16.31■□□□□ 0.2
SNPH-203ENST00000614659 ATP8B1O43520 1251 aa16.31■□□□□ 0.2
SNPH-203ENST00000614659 MAGEA1P43355 309 aa16.31■□□□□ 0.2
SNPH-203ENST00000614659 PPM1FP49593 454 aaPredicted RBP16.31■□□□□ 0.2
SNPH-203ENST00000614659 PAK2Q13177 524 aa16.31■□□□□ 0.2
SNPH-203ENST00000614659 TRIM58Q8NG06 486 aa16.31■□□□□ 0.2
SNPH-203ENST00000614659 ZBTB21Q9ULJ3 1066 aa16.31■□□□□ 0.2
SNPH-203ENST00000614659 M0R2C6 588 aa16.31■□□□□ 0.2
SNPH-203ENST00000614659 GYG1P46976 350 aa16.31■□□□□ 0.2
SNPH-203ENST00000614659 TSNARE1Q96NA8 513 aa16.31■□□□□ 0.2
SNPH-203ENST00000614659 MYO1AQ9UBC5 1043 aa16.31■□□□□ 0.2
SNPH-203ENST00000614659 ABCC12Q96J65 1359 aa16.31■□□□□ 0.2
SNPH-203ENST00000614659 USP17L3A6NCW0 530 aa16.3■□□□□ 0.2
SNPH-203ENST00000614659 USP17L4A6NCW7 530 aa16.3■□□□□ 0.2
SNPH-203ENST00000614659 MTMR3Q13615 1198 aa16.3■□□□□ 0.2
SNPH-203ENST00000614659 CFAP221Q4G0U5 840 aa16.3■□□□□ 0.2
SNPH-203ENST00000614659 USP17L1Q7RTZ2 530 aa16.3■□□□□ 0.2
SNPH-203ENST00000614659 ADD1P35611 737 aaKnown RBP16.3■□□□□ 0.2
SNPH-203ENST00000614659 CCDC6Q16204 474 aa16.3■□□□□ 0.2
SNPH-203ENST00000614659 APOA5Q6Q788 366 aa16.3■□□□□ 0.2
SNPH-203ENST00000614659 C10orf67Q8IYJ2 551 aa16.3■□□□□ 0.2
SNPH-203ENST00000614659 CPXCR1Q8N123 301 aa16.3■□□□□ 0.2
SNPH-203ENST00000614659 ATP6V0A2Q9Y487 856 aa16.3■□□□□ 0.2
SNPH-203ENST00000614659 ARHGEF35A5YM69 484 aa16.3■□□□□ 0.2
SNPH-203ENST00000614659 OTUD6AQ7L8S5 288 aa16.3■□□□□ 0.2
SNPH-203ENST00000614659 NLRP10Q86W26 655 aa16.3■□□□□ 0.2
SNPH-203ENST00000614659 ZEB2O60315 1214 aa16.3■□□□□ 0.2
SNPH-203ENST00000614659 ATP2A2P16615 1042 aaKnown RBP16.3■□□□□ 0.2
SNPH-203ENST00000614659 U2AF2P26368 475 aaKnown RBP eCLIP16.3■□□□□ 0.2
SNPH-203ENST00000614659 ICA1Q05084 483 aa16.3■□□□□ 0.2
SNPH-203ENST00000614659 HAUS4Q9H6D7 363 aa16.3■□□□□ 0.2
SNPH-203ENST00000614659 HOMER2Q9NSB8 354 aa16.3■□□□□ 0.2
SNPH-203ENST00000614659 SMCO2A6NFE2 343 aa16.29■□□□□ 0.2
SNPH-203ENST00000614659 USP17L12C9JPN9 530 aa16.29■□□□□ 0.2
SNPH-203ENST00000614659 USP17L21D6R901 530 aa16.29■□□□□ 0.2
SNPH-203ENST00000614659 KIF23Q02241 960 aaPredicted RBP16.29■□□□□ 0.2
SNPH-203ENST00000614659 ABCB5Q2M3G0 1257 aa16.29■□□□□ 0.2
SNPH-203ENST00000614659 GREM2Q9H772 168 aa16.29■□□□□ 0.2
SNPH-203ENST00000614659 H7C1W4 665 aa16.29■□□□□ 0.2
SNPH-203ENST00000614659 SH2B2O14492 632 aaPredicted RBP16.29■□□□□ 0.2
SNPH-203ENST00000614659 GRIN3BO60391 1043 aa16.29■□□□□ 0.2
SNPH-203ENST00000614659 OR52Z1P0C646 297 aa16.29■□□□□ 0.2
SNPH-203ENST00000614659 SP4Q02446 784 aa16.29■□□□□ 0.2
SNPH-203ENST00000614659 RUFY4Q6ZNE9 571 aa16.29■□□□□ 0.2
SNPH-203ENST00000614659 UTP11Q9Y3A2 253 aaKnown RBP16.29■□□□□ 0.2
SNPH-203ENST00000614659 HSPA1LP34931 641 aa16.29■□□□□ 0.2
SNPH-203ENST00000614659 WDR44Q5JSH3 913 aa16.29■□□□□ 0.2
SNPH-203ENST00000614659 LINC00301Q8NCQ3 95 aa16.29■□□□□ 0.2
SNPH-203ENST00000614659 AK8Q96MA6 479 aa16.29■□□□□ 0.2
SNPH-203ENST00000614659 IQCGQ9H095 443 aaKnown RBP16.29■□□□□ 0.2
SNPH-203ENST00000614659 NRXN1Q9ULB1 1477 aa16.29■□□□□ 0.2
SNPH-203ENST00000614659 IGSF3O75054 1194 aa16.28■□□□□ 0.2
SNPH-203ENST00000614659 SASH1O94885 1247 aa16.28■□□□□ 0.2
SNPH-203ENST00000614659 PPP1R7Q15435 360 aa16.28■□□□□ 0.2
SNPH-203ENST00000614659 GSTA5Q7RTV2 222 aa16.28■□□□□ 0.2
SNPH-203ENST00000614659 SLFN12Q8IYM2 578 aa16.28■□□□□ 0.2
SNPH-203ENST00000614659 PNMA3Q9UL41 463 aa16.28■□□□□ 0.2
SNPH-203ENST00000614659 PPFIA1Q13136 1202 aa16.28■□□□□ 0.2
SNPH-203ENST00000614659 KCTD2Q14681 263 aa16.28■□□□□ 0.2
SNPH-203ENST00000614659 PPP2R5EQ16537 467 aa16.28■□□□□ 0.2
SNPH-203ENST00000614659 TRMT44Q8IYL2 757 aaKnown RBP16.28■□□□□ 0.2
SNPH-203ENST00000614659 KIFC2Q96AC6 838 aa16.28■□□□□ 0.2
SNPH-203ENST00000614659 PAGR1Q9BTK6 254 aa16.28■□□□□ 0.2
SNPH-203ENST00000614659 TRIM6Q9C030 488 aaPredicted RBP16.28■□□□□ 0.2
SNPH-203ENST00000614659 BSDC1Q9NW68 430 aaPredicted RBP16.28■□□□□ 0.2
SNPH-203ENST00000614659 PHLPP2Q6ZVD8 1323 aa16.28■□□□□ 0.2
SNPH-203ENST00000614659 USP32Q8NFA0 1604 aa16.28■□□□□ 0.2
SNPH-203ENST00000614659 LIFRP42702 1097 aa16.28■□□□□ 0.2
SNPH-203ENST00000614659 NEK8Q86SG6 692 aa16.28■□□□□ 0.2
SNPH-203ENST00000614659 CEP57Q86XR8 500 aa16.28■□□□□ 0.2
SNPH-203ENST00000614659 FNBP1Q96RU3 617 aa16.28■□□□□ 0.2
SNPH-203ENST00000614659 SAR1BQ9Y6B6 198 aa16.28■□□□□ 0.2
SNPH-203ENST00000614659 FRMPD1Q5SYB0 1578 aa16.28■□□□□ 0.2
SNPH-203ENST00000614659 HERC4Q5GLZ8 1057 aaPredicted RBP16.28■□□□□ 0.2
SNPH-203ENST00000614659 KRT26Q7Z3Y9 468 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms