RNA–Protein interactions for RNA: ENST00000614293.4

ABCA2-223, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5 BASIC

Gene ABCA2, Length 8,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-223	ENST00000614293	FAN1	Q9Y2M0	1017 aa		13.36	□□□□□ -0.27
ABCA2-223	ENST00000614293	POLR2M	P0CAP2	368 aa		13.36	□□□□□ -0.27
ABCA2-223	ENST00000614293	CFAP36	Q96G28	342 aa		13.36	□□□□□ -0.27
ABCA2-223	ENST00000614293	LARP6	Q9BRS8	491 aa	Known RBP	13.36	□□□□□ -0.27
ABCA2-223	ENST00000614293	PIDD1	Q9HB75	910 aa		13.36	□□□□□ -0.27
ABCA2-223	ENST00000614293	MBD4	O95243	580 aa		13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	TROVE2	P10155	538 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	SKIL	P12757	684 aa		13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	PHEX	P78562	749 aa		13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	CCDC105	Q8IYK2	499 aa		13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	SRPK1	Q96SB4	655 aa	Known RBP	13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	TBC1D2	Q9BYX2	928 aa		13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	PIK3CA	P42336	1068 aa		13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	WHAMMP3	Q1A5X7	153 aa		13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	ARHGEF1	Q92888	912 aa	Known RBP	13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	C8orf74	Q6P047	294 aa		13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	MTIF3	Q9H2K0	278 aa	Known RBP	13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	TMCC1	O94876	653 aa		13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	BANK1	Q8NDB2	785 aa		13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	RNF217	Q8TC41	542 aa		13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	RNF139	Q8WU17	664 aa		13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	PTK2B	Q14289	1009 aa		13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	FAM98C	Q17RN3	349 aa	Known RBP	13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	PATL1	Q86TB9	770 aa	Known RBP	13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	KIAA0556	O60303	1618 aa		13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	TBC1D9	Q6ZT07	1266 aa		13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	SNX29	Q8TEQ0	813 aa		13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	LRRC2	Q9BYS8	371 aa		13.35	□□□□□ -0.27
ABCA2-223	ENST00000614293	FAM160A1	Q05DH4	1040 aa		13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	NACC1	Q96RE7	527 aa		13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	TXK	P42681	527 aa		13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	PDE6C	P51160	858 aa		13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	RAPH1	Q70E73	1250 aa		13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	REXO1	Q8N1G1	1221 aa	Known RBP	13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	TRAIP	Q9BWF2	469 aa		13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	SLC39A6	Q13433	755 aa		13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	MAP7D3	Q8IWC1	876 aa		13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	SRRM1	Q8IYB3	904 aa	Known RBP	13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	ARHGAP45	Q92619	1136 aa		13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	ZMYM4	Q5VZL5	1548 aa		13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	ITGA6	P23229	1130 aa		13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	ZNF174	Q15697	407 aa		13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	C2CD5	Q86YS7	1000 aa		13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	LINS1	Q8NG48	757 aa		13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	TTF2	Q9UNY4	1162 aa	Known RBP	13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	PPP1R2P3	Q6NXS1	205 aa		13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	MIS18BP1	Q6P0N0	1132 aa		13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	TADA2B	Q86TJ2	420 aa		13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	YAF2	Q8IY57	180 aa		13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	PGBD1	Q96JS3	809 aa		13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	BPIFB4	P59827	614 aa		13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	TRIM42	Q8IWZ5	723 aa		13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	URGCP	Q8TCY9	931 aa		13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	MAST1	Q9Y2H9	1570 aa		13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	NOS1	P29475	1434 aa		13.34	□□□□□ -0.27
ABCA2-223	ENST00000614293	CSGALNACT2	Q8N6G5	542 aa		13.33	□□□□□ -0.27
ABCA2-223	ENST00000614293	DISC1	Q9NRI5	854 aa		13.33	□□□□□ -0.27
ABCA2-223	ENST00000614293	FLT4	P35916	1363 aa		13.33	□□□□□ -0.28
ABCA2-223	ENST00000614293	RAB42	Q8N4Z0	105 aa		13.33	□□□□□ -0.28
ABCA2-223	ENST00000614293	SYNRG	Q9UMZ2	1314 aa		13.33	□□□□□ -0.28
ABCA2-223	ENST00000614293	F13A1	P00488	732 aa		13.33	□□□□□ -0.28
ABCA2-223	ENST00000614293	ZSCAN23	Q3MJ62	389 aa		13.33	□□□□□ -0.28
ABCA2-223	ENST00000614293	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.33	□□□□□ -0.28
ABCA2-223	ENST00000614293	TNN	Q9UQP3	1299 aa		13.33	□□□□□ -0.28
ABCA2-223	ENST00000614293	PLXNC1	O60486	1568 aa		13.33	□□□□□ -0.28
ABCA2-223	ENST00000614293	HELB	Q8NG08	1087 aa	Predicted RBP	13.33	□□□□□ -0.28
ABCA2-223	ENST00000614293	CDHR1	Q96JP9	859 aa		13.33	□□□□□ -0.28
ABCA2-223	ENST00000614293	TXNDC9	O14530	226 aa		13.33	□□□□□ -0.28
ABCA2-223	ENST00000614293	SMIM24	O75264	130 aa		13.33	□□□□□ -0.28
ABCA2-223	ENST00000614293	CCDC84	Q86UT8	332 aa	Predicted RBP	13.33	□□□□□ -0.28
ABCA2-223	ENST00000614293	CCDC138	Q96M89	665 aa		13.33	□□□□□ -0.28
ABCA2-223	ENST00000614293	TEKT3	Q9BXF9	490 aa		13.33	□□□□□ -0.28
ABCA2-223	ENST00000614293	DRC3	Q9H069	523 aa		13.33	□□□□□ -0.28
ABCA2-223	ENST00000614293	TRIM37	O94972	964 aa		13.33	□□□□□ -0.28
ABCA2-223	ENST00000614293	ATXN8OS	P0DMR3	200 aa		13.33	□□□□□ -0.28
ABCA2-223	ENST00000614293	MYO1E	Q12965	1108 aa		13.33	□□□□□ -0.28
ABCA2-223	ENST00000614293	AOC3	Q16853	763 aa		13.33	□□□□□ -0.28
ABCA2-223	ENST00000614293	THEM5	Q8N1Q8	247 aa		13.33	□□□□□ -0.28
ABCA2-223	ENST00000614293	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.33	□□□□□ -0.28
ABCA2-223	ENST00000614293	XRCC5	P13010	732 aa	Known RBP	13.32	□□□□□ -0.28
ABCA2-223	ENST00000614293	ARMCX5	Q6P1M9	558 aa		13.32	□□□□□ -0.28
ABCA2-223	ENST00000614293	CTAGE3P	Q8IX95	158 aa		13.32	□□□□□ -0.28
ABCA2-223	ENST00000614293	RNF10	Q8N5U6	811 aa	Known RBP	13.32	□□□□□ -0.28
ABCA2-223	ENST00000614293	C2orf69	Q8N8R5	385 aa		13.32	□□□□□ -0.28
ABCA2-223	ENST00000614293	USP40	Q9NVE5	1235 aa		13.32	□□□□□ -0.28
ABCA2-223	ENST00000614293	CDV3	Q9UKY7	258 aa	Known RBP	13.32	□□□□□ -0.28
ABCA2-223	ENST00000614293	HPCAL4	Q9UM19	191 aa		13.32	□□□□□ -0.28
ABCA2-223	ENST00000614293	PEX26	Q7Z412	305 aa		13.32	□□□□□ -0.28
ABCA2-223	ENST00000614293	TMEM106C	Q9BVX2	250 aa		13.32	□□□□□ -0.28
ABCA2-223	ENST00000614293	WDR62	O43379	1518 aa		13.32	□□□□□ -0.28
ABCA2-223	ENST00000614293	EPHB1	P54762	984 aa		13.32	□□□□□ -0.28
ABCA2-223	ENST00000614293	FAM71B	Q8TC56	605 aa		13.32	□□□□□ -0.28
ABCA2-223	ENST00000614293	SNX21	Q969T3	373 aa		13.32	□□□□□ -0.28
ABCA2-223	ENST00000614293	ERO1A	Q96HE7	468 aa		13.32	□□□□□ -0.28
ABCA2-223	ENST00000614293	RUNDC3B	Q96NL0	473 aa		13.32	□□□□□ -0.28

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