RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 ATP2A1O14983 1001 aa26.94■■□□□ 1.9
FAM228B-208ENST00000613899 ZBED4O75132 1171 aa26.94■■□□□ 1.9
FAM228B-208ENST00000613899 BMP3P12645 472 aa26.94■■□□□ 1.9
FAM228B-208ENST00000613899 NMIQ13287 307 aaPredicted RBP26.94■■□□□ 1.9
FAM228B-208ENST00000613899 PLEKHM2Q8IWE5 1019 aa26.94■■□□□ 1.9
FAM228B-208ENST00000613899 KIFC2Q96AC6 838 aa26.94■■□□□ 1.9
FAM228B-208ENST00000613899 DIS3Q9Y2L1 958 aaKnown RBP26.94■■□□□ 1.9
FAM228B-208ENST00000613899 CCDC171Q6TFL3 1326 aa26.93■■□□□ 1.9
FAM228B-208ENST00000613899 ORC4O43929 436 aa26.93■■□□□ 1.9
FAM228B-208ENST00000613899 RBM27Q9P2N5 1060 aaKnown RBP26.93■■□□□ 1.9
FAM228B-208ENST00000613899 STX8Q9UNK0 236 aa26.93■■□□□ 1.9
FAM228B-208ENST00000613899 SEPT4O43236 478 aa26.92■■□□□ 1.9
FAM228B-208ENST00000613899 HSPD1P10809 573 aaKnown RBP26.92■■□□□ 1.9
FAM228B-208ENST00000613899 FXR1P51114 621 aaKnown RBP eCLIP26.92■■□□□ 1.9
FAM228B-208ENST00000613899 MFAP1P55081 439 aaKnown RBP26.92■■□□□ 1.9
FAM228B-208ENST00000613899 GMCL1Q96IK5 515 aa26.92■■□□□ 1.9
FAM228B-208ENST00000613899 SLC38A10Q9HBR0 1119 aa26.92■■□□□ 1.9
FAM228B-208ENST00000613899 NRBP1Q9UHY1 535 aa26.92■■□□□ 1.9
FAM228B-208ENST00000613899 ISY1Q9ULR0 285 aaKnown RBP26.92■■□□□ 1.9
FAM228B-208ENST00000613899 DNM1LO00429 736 aa26.91■■□□□ 1.9
FAM228B-208ENST00000613899 RANBP6O60518 1105 aaKnown RBP26.91■■□□□ 1.9
FAM228B-208ENST00000613899 FGAP02671 866 aa26.91■■□□□ 1.9
FAM228B-208ENST00000613899 PGK2P07205 417 aa26.91■■□□□ 1.9
FAM228B-208ENST00000613899 FDX1P10109 184 aa26.91■■□□□ 1.9
FAM228B-208ENST00000613899 STAT2P52630 851 aa26.91■■□□□ 1.9
FAM228B-208ENST00000613899 OAZ1P54368 228 aa26.91■■□□□ 1.9
FAM228B-208ENST00000613899 ZNF589Q86UQ0 364 aaPredicted RBP26.91■■□□□ 1.9
FAM228B-208ENST00000613899 CPXCR1Q8N123 301 aa26.91■■□□□ 1.9
FAM228B-208ENST00000613899 PRO3102Q9H379 93 aa26.91■■□□□ 1.9
FAM228B-208ENST00000613899 SUPT16HQ9Y5B9 1047 aaKnown RBP26.91■■□□□ 1.9
FAM228B-208ENST00000613899 FGRP09769 529 aa26.9■■□□□ 1.9
FAM228B-208ENST00000613899 SLC1A4P43007 532 aa26.9■■□□□ 1.9
FAM228B-208ENST00000613899 ZNF792Q3KQV3 632 aa26.9■■□□□ 1.9
FAM228B-208ENST00000613899 FAM160B2Q86V87 743 aa26.9■■□□□ 1.9
FAM228B-208ENST00000613899 TINF2Q9BSI4 451 aa26.9■■□□□ 1.9
FAM228B-208ENST00000613899 TOMM22Q9NS69 142 aa26.9■■□□□ 1.9
FAM228B-208ENST00000613899 TMEM232C9JQI7 657 aa26.89■■□□□ 1.9
FAM228B-208ENST00000613899 SDSP20132 328 aa26.89■■□□□ 1.9
FAM228B-208ENST00000613899 ARRDC4Q8NCT1 418 aa26.89■■□□□ 1.9
FAM228B-208ENST00000613899 CHURC1Q8WUH1 139 aa26.89■■□□□ 1.9
FAM228B-208ENST00000613899 INCENPQ9NQS7 918 aa26.89■■□□□ 1.9
FAM228B-208ENST00000613899 IL17RBQ9NRM6 502 aa26.89■■□□□ 1.9
FAM228B-208ENST00000613899 FBXO40Q9UH90 709 aa26.89■■□□□ 1.9
FAM228B-208ENST00000613899 RIPK3Q9Y572 518 aa26.89■■□□□ 1.9
FAM228B-208ENST00000613899 A0A1W2PPC1 479 aa26.88■■□□□ 1.89
FAM228B-208ENST00000613899 IKQ13123 557 aaPredicted RBP26.88■■□□□ 1.89
FAM228B-208ENST00000613899 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.88■■□□□ 1.89
FAM228B-208ENST00000613899 DDX11Q96FC9 970 aa26.88■■□□□ 1.89
FAM228B-208ENST00000613899 RAVER2Q9HCJ3 691 aaKnown RBP26.88■■□□□ 1.89
FAM228B-208ENST00000613899 ZMYND8Q9ULU4 1186 aaPredicted RBP26.88■■□□□ 1.89
FAM228B-208ENST00000613899 TACC3Q9Y6A5 838 aa26.88■■□□□ 1.89
FAM228B-208ENST00000613899 RANBP2P49792 3224 aaKnown RBP26.87■■□□□ 1.89
FAM228B-208ENST00000613899 NMT2O60551 498 aa26.87■■□□□ 1.89
FAM228B-208ENST00000613899 SLC4A3P48751 1232 aa26.87■■□□□ 1.89
FAM228B-208ENST00000613899 PRAMEF19Q5SWL8 479 aa26.87■■□□□ 1.89
FAM228B-208ENST00000613899 MSL3Q8N5Y2 521 aaKnown RBP26.87■■□□□ 1.89
FAM228B-208ENST00000613899 CHST13Q8NET6 341 aa26.87■■□□□ 1.89
FAM228B-208ENST00000613899 SENP6Q9GZR1 1112 aaPredicted RBP26.87■■□□□ 1.89
FAM228B-208ENST00000613899 LAMA4Q16363 1823 aa26.86■■□□□ 1.89
FAM228B-208ENST00000613899 KBTBD13C9JR72 458 aa26.86■■□□□ 1.89
FAM228B-208ENST00000613899 HIP1O00291 1037 aa26.86■■□□□ 1.89
FAM228B-208ENST00000613899 PLA2G6O60733 806 aa26.86■■□□□ 1.89
FAM228B-208ENST00000613899 PCP11498 1178 aaKnown RBP26.86■■□□□ 1.89
FAM228B-208ENST00000613899 MCCP23508 829 aa26.86■■□□□ 1.89
FAM228B-208ENST00000613899 NOVP48745 357 aa26.86■■□□□ 1.89
FAM228B-208ENST00000613899 LRRC26Q2I0M4 334 aa26.86■■□□□ 1.89
FAM228B-208ENST00000613899 RRP12Q5JTH9 1297 aaKnown RBP26.86■■□□□ 1.89
FAM228B-208ENST00000613899 STAG1Q8WVM7 1258 aa26.86■■□□□ 1.89
FAM228B-208ENST00000613899 DIAPH3Q9NSV4 1193 aa26.86■■□□□ 1.89
FAM228B-208ENST00000613899 ANO1Q5XXA6 986 aa26.85■■□□□ 1.89
FAM228B-208ENST00000613899 PCDH10Q9P2E7 1040 aa26.85■■□□□ 1.89
FAM228B-208ENST00000613899 CNPY2Q9Y2B0 182 aa26.85■■□□□ 1.89
FAM228B-208ENST00000613899 DNAJC25-GNG10A0A024R161 153 aa26.84■■□□□ 1.89
FAM228B-208ENST00000613899 HAND2P61296 217 aa26.84■■□□□ 1.89
FAM228B-208ENST00000613899 GJC2Q5T442 439 aaPredicted RBP26.84■■□□□ 1.89
FAM228B-208ENST00000613899 RCSD1Q6JBY9 416 aa26.84■■□□□ 1.89
FAM228B-208ENST00000613899 ANKRD35Q8N283 1001 aa26.84■■□□□ 1.89
FAM228B-208ENST00000613899 RNF41Q9H4P4 317 aaPredicted RBP26.84■■□□□ 1.89
FAM228B-208ENST00000613899 SYNGAP1Q96PV0 1343 aa26.84■■□□□ 1.89
FAM228B-208ENST00000613899 RARBP10826 455 aa26.83■■□□□ 1.89
FAM228B-208ENST00000613899 SYN1P17600 705 aa26.83■■□□□ 1.89
FAM228B-208ENST00000613899 AKNAD1Q5T1N1 836 aa26.83■■□□□ 1.89
FAM228B-208ENST00000613899 CWC27Q6UX04 472 aaKnown RBP26.83■■□□□ 1.89
FAM228B-208ENST00000613899 KCTD1Q719H9 257 aa26.83■■□□□ 1.89
FAM228B-208ENST00000613899 ZNF467Q7Z7K2 595 aaPredicted RBP26.83■■□□□ 1.89
FAM228B-208ENST00000613899 DCAF4Q8WV16 495 aa26.83■■□□□ 1.89
FAM228B-208ENST00000613899 GDF15Q99988 308 aa26.83■■□□□ 1.89
FAM228B-208ENST00000613899 TCP11L1Q9NUJ3 509 aa26.83■■□□□ 1.89
FAM228B-208ENST00000613899 SMCHD1A6NHR9 2005 aa26.83■■□□□ 1.89
FAM228B-208ENST00000613899 AKR1A1P14550 325 aa26.82■■□□□ 1.88
FAM228B-208ENST00000613899 MFSD6Q6ZSS7 791 aa26.82■■□□□ 1.88
FAM228B-208ENST00000613899 ACAD9Q9H845 621 aa26.82■■□□□ 1.88
FAM228B-208ENST00000613899 TOP1P11387 765 aaKnown RBP26.81■■□□□ 1.88
FAM228B-208ENST00000613899 BMP8BP34820 402 aa26.81■■□□□ 1.88
FAM228B-208ENST00000613899 CCDC96Q2M329 555 aa26.81■■□□□ 1.88
FAM228B-208ENST00000613899 TKFCQ3LXA3 575 aa26.81■■□□□ 1.88
FAM228B-208ENST00000613899 MAMDC4Q6UXC1 1216 aa26.81■■□□□ 1.88
FAM228B-208ENST00000613899 CHMP4CQ96CF2 233 aa26.81■■□□□ 1.88
FAM228B-208ENST00000613899 HOMER2Q9NSB8 354 aa26.81■■□□□ 1.88
FAM228B-208ENST00000613899 MTMR7Q9Y216 660 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms