RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 TMX3Q96JJ7 454 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 UROC1Q96N76 676 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 RGPD8O14715 1765 aaPredicted RBP5.25□□□□□ -1.57
HDDC2-208ENST00000609021 SLIT1O75093 1534 aa5.25□□□□□ -1.57
HDDC2-208ENST00000609021 AP3B1O00203 1094 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 CYTH3O43739 400 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 URI1O94763 535 aaPredicted RBP5.24□□□□□ -1.57
HDDC2-208ENST00000609021 RBP3P10745 1247 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 CCT8P50990 548 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 TBX4P57082 545 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 APOBRQ0VD83 1088 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 HLTFQ14527 1009 aaKnown RBP eCLIP5.24□□□□□ -1.57
HDDC2-208ENST00000609021 ZNF449Q6P9G9 518 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 SRGAP1Q7Z6B7 1085 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 PPFIBP1Q86W92 1011 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 BPHLQ86WA6 291 aaPredicted RBP5.24□□□□□ -1.57
HDDC2-208ENST00000609021 RAB11FIP4Q86YS3 637 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 SLC35B4Q969S0 331 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 C8orf48Q96LL4 319 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 CARD11Q9BXL7 1154 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 SLC39A2Q9NP94 309 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 BAIAP2L1Q9UHR4 511 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 PPP1R9AQ9ULJ8 1098 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 ATP9BO43861 1147 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 TADA3O75528 432 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 CCDC166P0CW27 439 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 TPD52P55327 224 aaPredicted RBP5.24□□□□□ -1.57
HDDC2-208ENST00000609021 NXNQ6DKJ4 435 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 FCHSD1Q86WN1 690 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 DZIP1LQ8IYY4 767 aaKnown RBP5.24□□□□□ -1.57
HDDC2-208ENST00000609021 LRRC43Q8N309 656 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 GPR161Q8N6U8 529 aaKnown RBP5.24□□□□□ -1.57
HDDC2-208ENST00000609021 TRIML2Q8N7C3 387 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 FAM200AQ8TCP9 573 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 KCNN1Q92952 543 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 PPP2R3CQ969Q6 453 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 ABCG4Q9H172 646 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 CCSER2Q9H7U1 834 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 PARVGQ9HBI0 331 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 ZFATQ9P243 1243 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 ORC3Q9UBD5 711 aaPredicted RBP5.24□□□□□ -1.57
HDDC2-208ENST00000609021 ZNF180Q9UJW8 692 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 ASAP1Q9ULH1 1129 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 CPS1P31327 1500 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 STXBP3O00186 592 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 FLOT1O75955 427 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 TMOD1P28289 359 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 ATP5DP30049 168 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 ADD2P35612 726 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 TNNI2P48788 182 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 EVCP57679 992 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 DR1Q01658 176 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 AKAP17AQ02040 695 aaKnown RBP5.24□□□□□ -1.57
HDDC2-208ENST00000609021 SEPT6Q14141 434 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 WASHC4Q2M389 1173 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 CFAP100Q494V2 611 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 USH1GQ495M9 461 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 EFCAB2Q5VUJ9 269 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 CHADLQ6NUI6 762 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 NOC3LQ8WTT2 800 aaKnown RBP5.24□□□□□ -1.57
HDDC2-208ENST00000609021 WDR60Q8WVS4 1066 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 FAM163AQ96GL9 167 aaPredicted RBP5.24□□□□□ -1.57
HDDC2-208ENST00000609021 RNPC3Q96LT9 517 aaKnown RBP5.24□□□□□ -1.57
HDDC2-208ENST00000609021 API5Q9BZZ5 524 aaKnown RBP5.24□□□□□ -1.57
HDDC2-208ENST00000609021 CNNM2Q9H8M5 875 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 FAM204AQ9H8W3 233 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 KMT5AQ9NQR1 393 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 CNGB3Q9NQW8 809 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 FKBP14Q9NWM8 211 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 KIAA1522Q9P206 1035 aaPredicted RBP5.24□□□□□ -1.57
HDDC2-208ENST00000609021 FAM184BQ9ULE4 1060 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 PHF24Q9UPV7 400 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 ARHGAP23Q9P227 1491 aa5.24□□□□□ -1.57
HDDC2-208ENST00000609021 LRPPRCP42704 1394 aaKnown RBP5.24□□□□□ -1.57
HDDC2-208ENST00000609021 PALM3A6NDB9 673 aaPredicted RBP5.23□□□□□ -1.57
HDDC2-208ENST00000609021 A6NJR5 290 aa5.23□□□□□ -1.57
HDDC2-208ENST00000609021 SPDYE16A6NNV3 312 aaPredicted RBP5.23□□□□□ -1.57
HDDC2-208ENST00000609021 A6NNZ2 444 aa5.23□□□□□ -1.57
HDDC2-208ENST00000609021 EFCAB8A8MWE9 144 aa5.23□□□□□ -1.57
HDDC2-208ENST00000609021 TTC34A8MYJ7 566 aa5.23□□□□□ -1.57
HDDC2-208ENST00000609021 TBC1D8O95759 1140 aa5.23□□□□□ -1.57
HDDC2-208ENST00000609021 SKIP12755 728 aa5.23□□□□□ -1.57
HDDC2-208ENST00000609021 KRT10P13645 584 aa5.23□□□□□ -1.57
HDDC2-208ENST00000609021 IDO1P14902 403 aa5.23□□□□□ -1.57
HDDC2-208ENST00000609021 DDX5P17844 614 aaKnown RBP5.23□□□□□ -1.57
HDDC2-208ENST00000609021 ALDH3A1P30838 453 aa5.23□□□□□ -1.57
HDDC2-208ENST00000609021 TUBA4AP68366 448 aa5.23□□□□□ -1.57
HDDC2-208ENST00000609021 CDK17Q00537 523 aa5.23□□□□□ -1.57
HDDC2-208ENST00000609021 PDE1BQ01064 536 aa5.23□□□□□ -1.57
HDDC2-208ENST00000609021 PPIDQ08752 370 aaKnown RBP5.23□□□□□ -1.57
HDDC2-208ENST00000609021 CETN1Q12798 172 aa5.23□□□□□ -1.57
HDDC2-208ENST00000609021 DIXDC1Q155Q3 683 aa5.23□□□□□ -1.57
HDDC2-208ENST00000609021 BBS9Q3SYG4 887 aa5.23□□□□□ -1.57
HDDC2-208ENST00000609021 TUBB8Q3ZCM7 444 aa5.23□□□□□ -1.57
HDDC2-208ENST00000609021 CEP78Q5JTW2 689 aa5.23□□□□□ -1.57
HDDC2-208ENST00000609021 PHLDB2Q86SQ0 1253 aa5.23□□□□□ -1.57
HDDC2-208ENST00000609021 GRAMD2AQ8IUY3 354 aa5.23□□□□□ -1.57
HDDC2-208ENST00000609021 MAGEC3Q8TD91 643 aa5.23□□□□□ -1.57
HDDC2-208ENST00000609021 LPIN2Q92539 896 aa5.23□□□□□ -1.57
HDDC2-208ENST00000609021 SKA1Q96BD8 255 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms