RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 TMEM192Q8IY95 271 aa8.67□□□□□ -1.02
LINC00458-206ENST00000607494 ZNF655Q8N720 491 aaPredicted RBP8.67□□□□□ -1.02
LINC00458-206ENST00000607494 USP35Q9P2H5 1018 aa8.67□□□□□ -1.02
LINC00458-206ENST00000607494 CNOT6Q9ULM6 557 aaKnown RBP8.67□□□□□ -1.02
LINC00458-206ENST00000607494 ROBO2Q9HCK4 1378 aa8.66□□□□□ -1.02
LINC00458-206ENST00000607494 SSU72P8A0A1W2PR75 194 aa8.66□□□□□ -1.02
LINC00458-206ENST00000607494 FAM86C2PA6NEL3 165 aa8.66□□□□□ -1.02
LINC00458-206ENST00000607494 NRDCO43847 1150 aa8.66□□□□□ -1.02
LINC00458-206ENST00000607494 MCM4P33991 863 aa8.66□□□□□ -1.02
LINC00458-206ENST00000607494 EPHB3P54753 998 aa8.66□□□□□ -1.02
LINC00458-206ENST00000607494 SLC14A2Q15849 920 aa8.66□□□□□ -1.02
LINC00458-206ENST00000607494 HS2ST1Q7LGA3 356 aa8.66□□□□□ -1.02
LINC00458-206ENST00000607494 NLRC3Q7RTR2 1065 aa8.66□□□□□ -1.02
LINC00458-206ENST00000607494 LINC00116Q8NCU8 138 aa8.66□□□□□ -1.02
LINC00458-206ENST00000607494 BCL11AQ9H165 835 aa8.66□□□□□ -1.02
LINC00458-206ENST00000607494 EHMT1Q9H9B1 1298 aa8.66□□□□□ -1.02
LINC00458-206ENST00000607494 MBD1Q9UIS9 605 aaPredicted RBP8.66□□□□□ -1.02
LINC00458-206ENST00000607494 SIGLEC6O43699 453 aa8.65□□□□□ -1.02
LINC00458-206ENST00000607494 CLEC3AO75596 197 aa8.65□□□□□ -1.02
LINC00458-206ENST00000607494 HOXA5P20719 270 aa8.65□□□□□ -1.02
LINC00458-206ENST00000607494 SRSF3P84103 164 aaKnown RBP8.65□□□□□ -1.02
LINC00458-206ENST00000607494 APOBRQ0VD83 1088 aa8.65□□□□□ -1.02
LINC00458-206ENST00000607494 MRPL58Q14197 206 aaKnown RBP8.65□□□□□ -1.02
LINC00458-206ENST00000607494 PANK1Q8TE04 598 aa8.65□□□□□ -1.02
LINC00458-206ENST00000607494 C20orf173Q96LM9 149 aa8.65□□□□□ -1.02
LINC00458-206ENST00000607494 GFOD1Q9NXC2 390 aa8.65□□□□□ -1.02
LINC00458-206ENST00000607494 GPR55Q9Y2T6 319 aaPredicted RBP8.65□□□□□ -1.02
LINC00458-206ENST00000607494 KCTD3Q9Y597 815 aa8.65□□□□□ -1.02
LINC00458-206ENST00000607494 NCANO14594 1321 aa8.64□□□□□ -1.03
LINC00458-206ENST00000607494 TCF3P15923 654 aa8.64□□□□□ -1.03
LINC00458-206ENST00000607494 PI3P19957 117 aa8.64□□□□□ -1.03
LINC00458-206ENST00000607494 VAMP1P23763 118 aa8.64□□□□□ -1.03
LINC00458-206ENST00000607494 CTSKP43235 329 aa8.64□□□□□ -1.03
LINC00458-206ENST00000607494 KIR2DL1P43626 348 aaPredicted RBP8.64□□□□□ -1.03
LINC00458-206ENST00000607494 KIR2DL2P43627 348 aaPredicted RBP8.64□□□□□ -1.03
LINC00458-206ENST00000607494 SLC6A18Q96N87 628 aa8.64□□□□□ -1.03
LINC00458-206ENST00000607494 MKRN2Q9H000 416 aaKnown RBP8.64□□□□□ -1.03
LINC00458-206ENST00000607494 NME1P15531 152 aaKnown RBP8.63□□□□□ -1.03
LINC00458-206ENST00000607494 BMP7P18075 431 aa8.63□□□□□ -1.03
LINC00458-206ENST00000607494 VIPR1P32241 457 aa8.63□□□□□ -1.03
LINC00458-206ENST00000607494 BUD31P41223 144 aaPredicted RBP8.63□□□□□ -1.03
LINC00458-206ENST00000607494 CEBPAP49715 358 aaPredicted RBP8.63□□□□□ -1.03
LINC00458-206ENST00000607494 TMEM87AQ8NBN3 555 aa8.63□□□□□ -1.03
LINC00458-206ENST00000607494 CHST7Q9NS84 486 aa8.63□□□□□ -1.03
LINC00458-206ENST00000607494 B8ZZF3 427 aa8.62□□□□□ -1.03
LINC00458-206ENST00000607494 PRRG2O14669 202 aa8.62□□□□□ -1.03
LINC00458-206ENST00000607494 CTSWP56202 376 aa8.62□□□□□ -1.03
LINC00458-206ENST00000607494 RTP1P59025 263 aa8.62□□□□□ -1.03
LINC00458-206ENST00000607494 HSF5Q4G112 596 aaPredicted RBP8.62□□□□□ -1.03
LINC00458-206ENST00000607494 CRTC3Q6UUV7 619 aa8.62□□□□□ -1.03
LINC00458-206ENST00000607494 FCRL2Q96LA5 508 aaPredicted RBP8.62□□□□□ -1.03
LINC00458-206ENST00000607494 FADS2P1A8MWK0 482 aa8.61□□□□□ -1.03
LINC00458-206ENST00000607494 TRIM13O60858 407 aa8.61□□□□□ -1.03
LINC00458-206ENST00000607494 EAF1Q96JC9 268 aaPredicted RBP8.61□□□□□ -1.03
LINC00458-206ENST00000607494 SLC9A7Q96T83 725 aa8.61□□□□□ -1.03
LINC00458-206ENST00000607494 KRTAP4-11Q9BYQ6 195 aa8.61□□□□□ -1.03
LINC00458-206ENST00000607494 CNTD2Q9H8S5 307 aa8.61□□□□□ -1.03
LINC00458-206ENST00000607494 CRTAC1Q9NQ79 661 aa8.61□□□□□ -1.03
LINC00458-206ENST00000607494 ERVK13-1Q9NX77 482 aa8.61□□□□□ -1.03
LINC00458-206ENST00000607494 RAPGEFL1Q9UHV5 662 aa8.61□□□□□ -1.03
LINC00458-206ENST00000607494 MEIS3P2A8K0S8 358 aa8.6□□□□□ -1.03
LINC00458-206ENST00000607494 RAD51AP2Q09MP3 1159 aa8.6□□□□□ -1.03
LINC00458-206ENST00000607494 NKD1Q969G9 470 aa8.6□□□□□ -1.03
LINC00458-206ENST00000607494 CDADC1Q9BWV3 514 aa8.6□□□□□ -1.03
LINC00458-206ENST00000607494 PARD6AQ9NPB6 346 aa8.6□□□□□ -1.03
LINC00458-206ENST00000607494 SIRT5Q9NXA8 310 aa8.6□□□□□ -1.03
LINC00458-206ENST00000607494 FBXL21Q9UKT6 434 aa8.6□□□□□ -1.03
LINC00458-206ENST00000607494 A0A0G2JLL6 359 aaPredicted RBP8.59□□□□□ -1.03
LINC00458-206ENST00000607494 C9IYK1 514 aa8.59□□□□□ -1.03
LINC00458-206ENST00000607494 TNFRSF10CO14798 259 aa8.59□□□□□ -1.03
LINC00458-206ENST00000607494 ZNF385BQ569K4 471 aa8.59□□□□□ -1.03
LINC00458-206ENST00000607494 LDLRAD1Q5T700 205 aa8.59□□□□□ -1.03
LINC00458-206ENST00000607494 REXO1Q8N1G1 1221 aaKnown RBP8.59□□□□□ -1.03
LINC00458-206ENST00000607494 ZCCHC4Q9H5U6 513 aa8.59□□□□□ -1.03
LINC00458-206ENST00000607494 EPB41L4AQ9HCS5 686 aaPredicted RBP8.59□□□□□ -1.03
LINC00458-206ENST00000607494 AP5S1Q9NUS5 200 aa8.59□□□□□ -1.03
LINC00458-206ENST00000607494 PCDHB12Q9Y5F1 795 aa8.59□□□□□ -1.03
LINC00458-206ENST00000607494 TAF6LQ9Y6J9 622 aa8.59□□□□□ -1.03
LINC00458-206ENST00000607494 ZNF205O95201 554 aa8.58□□□□□ -1.04
LINC00458-206ENST00000607494 ACRP10323 421 aa8.58□□□□□ -1.04
LINC00458-206ENST00000607494 PNLIPP16233 465 aa8.58□□□□□ -1.04
LINC00458-206ENST00000607494 ZNF165P49910 485 aa8.58□□□□□ -1.04
LINC00458-206ENST00000607494 CDR1P51861 262 aa8.58□□□□□ -1.04
LINC00458-206ENST00000607494 TCERG1LQ5VWI1 586 aa8.58□□□□□ -1.04
LINC00458-206ENST00000607494 TDRD10Q5VZ19 366 aaKnown RBP8.58□□□□□ -1.04
LINC00458-206ENST00000607494 SLCO6A1Q86UG4 719 aa8.58□□□□□ -1.04
LINC00458-206ENST00000607494 SLITRK4Q8IW52 837 aa8.58□□□□□ -1.04
LINC00458-206ENST00000607494 SIGLEC10Q96LC7 697 aa8.58□□□□□ -1.04
LINC00458-206ENST00000607494 KCNC2Q96PR1 638 aa8.58□□□□□ -1.04
LINC00458-206ENST00000607494 IRAK3Q9Y616 596 aa8.58□□□□□ -1.04
LINC00458-206ENST00000607494 RFXAPO00287 272 aa8.57□□□□□ -1.04
LINC00458-206ENST00000607494 SHOXO15266 292 aa8.57□□□□□ -1.04
LINC00458-206ENST00000607494 BMP8BP34820 402 aa8.57□□□□□ -1.04
LINC00458-206ENST00000607494 CCNFP41002 786 aa8.57□□□□□ -1.04
LINC00458-206ENST00000607494 ERVFRD-1P60508 538 aa8.57□□□□□ -1.04
LINC00458-206ENST00000607494 AUHQ13825 339 aaKnown RBP8.57□□□□□ -1.04
LINC00458-206ENST00000607494 VMACQ2NL98 169 aa8.57□□□□□ -1.04
LINC00458-206ENST00000607494 SPON2Q9BUD6 331 aa8.57□□□□□ -1.04
LINC00458-206ENST00000607494 KLHL14Q9P2G3 628 aa8.57□□□□□ -1.04
LINC00458-206ENST00000607494 TNFRSF10DQ9UBN6 386 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms