RNA–Protein interactions for RNA: ENST00000604724.5

LINC01235-201, Transcript of long intergenic non-protein coding RNA 1235, humanhuman

TSL 2 BASIC

Gene LINC01235, Length 2,328 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01235-201ENST00000604724 ZMYND12Q9H0C1 365 aa12.37□□□□□ -0.43
LINC01235-201ENST00000604724 DHX36Q9H2U1 1008 aaKnown RBP12.37□□□□□ -0.43
LINC01235-201ENST00000604724 GPCPD1Q9NPB8 672 aa12.37□□□□□ -0.43
LINC01235-201ENST00000604724 PI4KBQ9UBF8 816 aa12.37□□□□□ -0.43
LINC01235-201ENST00000604724 ZBTB12Q9Y330 459 aaPredicted RBP12.37□□□□□ -0.43
LINC01235-201ENST00000604724 CCDC194A0A1B0GVG4 234 aa12.37□□□□□ -0.43
LINC01235-201ENST00000604724 PSMD14O00487 310 aa12.37□□□□□ -0.43
LINC01235-201ENST00000604724 BMP15O95972 392 aa12.37□□□□□ -0.43
LINC01235-201ENST00000604724 INF2Q27J81 1249 aa12.37□□□□□ -0.43
LINC01235-201ENST00000604724 RTKN2Q8IZC4 609 aa12.37□□□□□ -0.43
LINC01235-201ENST00000604724 SLC16A10Q8TF71 515 aa12.37□□□□□ -0.43
LINC01235-201ENST00000604724 FERMT2Q96AC1 680 aa12.37□□□□□ -0.43
LINC01235-201ENST00000604724 NAT10Q9H0A0 1025 aaKnown RBP12.37□□□□□ -0.43
LINC01235-201ENST00000604724 SEC63Q9UGP8 760 aaKnown RBP12.37□□□□□ -0.43
LINC01235-201ENST00000604724 BMP6P22004 513 aa12.36□□□□□ -0.43
LINC01235-201ENST00000604724 ZNF543Q08ER8 600 aa12.36□□□□□ -0.43
LINC01235-201ENST00000604724 POSTNQ15063 836 aa12.36□□□□□ -0.43
LINC01235-201ENST00000604724 ASPRV1Q53RT3 343 aa12.36□□□□□ -0.43
LINC01235-201ENST00000604724 TTBK2Q6IQ55 1244 aa12.36□□□□□ -0.43
LINC01235-201ENST00000604724 RSBN1LQ6PCB5 846 aaPredicted RBP12.36□□□□□ -0.43
LINC01235-201ENST00000604724 C4orf32Q8N8J7 132 aa12.36□□□□□ -0.43
LINC01235-201ENST00000604724 DHX58Q96C10 678 aa12.36□□□□□ -0.43
LINC01235-201ENST00000604724 SMCO2A6NFE2 343 aa12.36□□□□□ -0.43
LINC01235-201ENST00000604724 GDF11O95390 407 aa12.36□□□□□ -0.43
LINC01235-201ENST00000604724 SMARCA1P28370 1054 aa12.36□□□□□ -0.43
LINC01235-201ENST00000604724 CERKLQ49MI3 558 aaPredicted RBP12.36□□□□□ -0.43
LINC01235-201ENST00000604724 TATDN1Q6P1N9 297 aa12.36□□□□□ -0.43
LINC01235-201ENST00000604724 KCTD1Q719H9 257 aa12.36□□□□□ -0.43
LINC01235-201ENST00000604724 BPIFA3Q9BQP9 254 aa12.36□□□□□ -0.43
LINC01235-201ENST00000604724 ATRNL1Q5VV63 1379 aa12.35□□□□□ -0.43
LINC01235-201ENST00000604724 CLRN2A0PK11 232 aa12.35□□□□□ -0.43
LINC01235-201ENST00000604724 NPM3O75607 178 aaKnown RBP12.35□□□□□ -0.43
LINC01235-201ENST00000604724 SLC16A2P36021 539 aa12.35□□□□□ -0.43
LINC01235-201ENST00000604724 JAG1P78504 1218 aa12.35□□□□□ -0.43
LINC01235-201ENST00000604724 NCAPHQ15003 741 aa12.35□□□□□ -0.43
LINC01235-201ENST00000604724 GALNT17Q6IS24 598 aa12.35□□□□□ -0.43
LINC01235-201ENST00000604724 SARM1Q6SZW1 724 aa12.35□□□□□ -0.43
LINC01235-201ENST00000604724 COA7Q96BR5 231 aa12.35□□□□□ -0.43
LINC01235-201ENST00000604724 TMEM60Q9H2L4 133 aa12.35□□□□□ -0.43
LINC01235-201ENST00000604724 JMJD4Q9H9V9 463 aa12.35□□□□□ -0.43
LINC01235-201ENST00000604724 NRBP1Q9UHY1 535 aa12.35□□□□□ -0.43
LINC01235-201ENST00000604724 ATF5Q9Y2D1 282 aaPredicted RBP12.35□□□□□ -0.43
LINC01235-201ENST00000604724 SRCAPQ6ZRS2 3230 aa12.34□□□□□ -0.43
LINC01235-201ENST00000604724 SPDYE2BA6NHP3 402 aa12.34□□□□□ -0.43
LINC01235-201ENST00000604724 PPP1R11O60927 126 aaPredicted RBP12.34□□□□□ -0.43
LINC01235-201ENST00000604724 VIL1P09327 827 aaKnown RBP12.34□□□□□ -0.43
LINC01235-201ENST00000604724 SPDYE6P0CI01 402 aa12.34□□□□□ -0.43
LINC01235-201ENST00000604724 EEF2P13639 858 aaKnown RBP12.34□□□□□ -0.43
LINC01235-201ENST00000604724 SEPT2Q15019 361 aa12.34□□□□□ -0.43
LINC01235-201ENST00000604724 SIAH1Q8IUQ4 282 aa12.34□□□□□ -0.43
LINC01235-201ENST00000604724 ELOA2Q8IYF1 753 aaPredicted RBP12.34□□□□□ -0.43
LINC01235-201ENST00000604724 ADGRF4Q8IZF3 695 aa12.34□□□□□ -0.43
LINC01235-201ENST00000604724 CCDC17Q96LX7 622 aa12.34□□□□□ -0.43
LINC01235-201ENST00000604724 GMLQ99445 158 aa12.34□□□□□ -0.43
LINC01235-201ENST00000604724 KCNF1Q9H3M0 494 aa12.34□□□□□ -0.43
LINC01235-201ENST00000604724 TCP10L2B9ZVM9 353 aa12.34□□□□□ -0.43
LINC01235-201ENST00000604724 RAD21O60216 631 aa12.34□□□□□ -0.43
LINC01235-201ENST00000604724 CASP1P29466 404 aa12.34□□□□□ -0.43
LINC01235-201ENST00000604724 CDC25AP30304 524 aa12.34□□□□□ -0.43
LINC01235-201ENST00000604724 RRP1BQ14684 758 aaKnown RBP12.34□□□□□ -0.43
LINC01235-201ENST00000604724 CCDC96Q2M329 555 aa12.34□□□□□ -0.43
LINC01235-201ENST00000604724 CCDC12Q8WUD4 166 aaPredicted RBP12.34□□□□□ -0.43
LINC01235-201ENST00000604724 CSRNP1Q96S65 589 aa12.34□□□□□ -0.43
LINC01235-201ENST00000604724 TMEM260Q9NX78 707 aa12.34□□□□□ -0.43
LINC01235-201ENST00000604724 ENTPD3O75355 529 aa12.33□□□□□ -0.44
LINC01235-201ENST00000604724 GRIPAP1Q4V328 841 aa12.33□□□□□ -0.44
LINC01235-201ENST00000604724 NT5DC1Q5TFE4 455 aa12.33□□□□□ -0.44
LINC01235-201ENST00000604724 TRIM34Q9BYJ4 488 aa12.33□□□□□ -0.44
LINC01235-201ENST00000604724 HSD3B7Q9H2F3 369 aa12.33□□□□□ -0.44
LINC01235-201ENST00000604724 C6orf50Q9HD87 102 aa12.33□□□□□ -0.44
LINC01235-201ENST00000604724 BIN2Q9UBW5 565 aaPredicted RBP12.33□□□□□ -0.44
LINC01235-201ENST00000604724 MAN1B1Q9UKM7 699 aa12.33□□□□□ -0.44
LINC01235-201ENST00000604724 ZNF500O60304 480 aaPredicted RBP12.33□□□□□ -0.44
LINC01235-201ENST00000604724 PTGS1P23219 599 aa12.33□□□□□ -0.44
LINC01235-201ENST00000604724 AFMP43652 599 aa12.33□□□□□ -0.44
LINC01235-201ENST00000604724 SARSP49591 514 aaKnown RBP12.33□□□□□ -0.44
LINC01235-201ENST00000604724 SOGA3Q5TF21 947 aa12.33□□□□□ -0.44
LINC01235-201ENST00000604724 JAKMIP3Q5VZ66 844 aa12.33□□□□□ -0.44
LINC01235-201ENST00000604724 ARL6IP4Q66PJ3 421 aaKnown RBP12.33□□□□□ -0.44
LINC01235-201ENST00000604724 DRC7Q8IY82 874 aa12.33□□□□□ -0.44
LINC01235-201ENST00000604724 FAM177A1Q8N128 213 aaPredicted RBP12.33□□□□□ -0.44
LINC01235-201ENST00000604724 BRCA1P38398 1863 aaKnown RBP12.32□□□□□ -0.44
LINC01235-201ENST00000604724 USP17L10C9JJH3 530 aa12.32□□□□□ -0.44
LINC01235-201ENST00000604724 SLFN14P0C7P3 912 aa12.32□□□□□ -0.44
LINC01235-201ENST00000604724 GNA11P29992 359 aa12.32□□□□□ -0.44
LINC01235-201ENST00000604724 ICA1Q05084 483 aa12.32□□□□□ -0.44
LINC01235-201ENST00000604724 E2F4Q16254 413 aa12.32□□□□□ -0.44
LINC01235-201ENST00000604724 CCDC144BQ3MJ40 725 aa12.32□□□□□ -0.44
LINC01235-201ENST00000604724 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.32□□□□□ -0.44
LINC01235-201ENST00000604724 CDAN1Q8IWY9 1227 aa12.32□□□□□ -0.44
LINC01235-201ENST00000604724 REXO1Q8N1G1 1221 aaKnown RBP12.32□□□□□ -0.44
LINC01235-201ENST00000604724 SPATA20Q8TB22 786 aa12.32□□□□□ -0.44
LINC01235-201ENST00000604724 STAMQ92783 540 aa12.32□□□□□ -0.44
LINC01235-201ENST00000604724 PAGE5Q96GU1 130 aa12.32□□□□□ -0.44
LINC01235-201ENST00000604724 KANSL2Q9H9L4 492 aa12.32□□□□□ -0.44
LINC01235-201ENST00000604724 PIM2Q9P1W9 311 aa12.32□□□□□ -0.44
LINC01235-201ENST00000604724 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.32□□□□□ -0.44
LINC01235-201ENST00000604724 HOOK1Q9UJC3 728 aaKnown RBP12.32□□□□□ -0.44
LINC01235-201ENST00000604724 ARFGEF1Q9Y6D6 1849 aa12.32□□□□□ -0.44
LINC01235-201ENST00000604724 ESYT2A0FGR8 921 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms