RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 PRDM5Q9NQX1 630 aaPredicted RBP15.69■□□□□ 0.1
RPS28-204ENST00000602140 MTMR4Q9NYA4 1195 aa15.69■□□□□ 0.1
RPS28-204ENST00000602140 CTDP1Q9Y5B0 961 aaPredicted RBP15.69■□□□□ 0.1
RPS28-204ENST00000602140 LAMA2P24043 3122 aaKnown RBP15.68■□□□□ 0.1
RPS28-204ENST00000602140 ZBED4O75132 1171 aa15.68■□□□□ 0.1
RPS28-204ENST00000602140 TTLL1O95922 423 aa15.68■□□□□ 0.1
RPS28-204ENST00000602140 PGK1P00558 417 aa15.68■□□□□ 0.1
RPS28-204ENST00000602140 ZNF865P0CJ78 1059 aaPredicted RBP15.68■□□□□ 0.1
RPS28-204ENST00000602140 LRRC47Q8N1G4 583 aaKnown RBP15.68■□□□□ 0.1
RPS28-204ENST00000602140 DDX11Q96FC9 970 aa15.68■□□□□ 0.1
RPS28-204ENST00000602140 NACAP1Q9BZK3 213 aa15.68■□□□□ 0.1
RPS28-204ENST00000602140 MTMR10Q9NXD2 777 aa15.68■□□□□ 0.1
RPS28-204ENST00000602140 PHF24Q9UPV7 400 aa15.68■□□□□ 0.1
RPS28-204ENST00000602140 CNPY2Q9Y2B0 182 aa15.68■□□□□ 0.1
RPS28-204ENST00000602140 PLXNA1Q9UIW2 1896 aa15.67■□□□□ 0.1
RPS28-204ENST00000602140 ATP2A1O14983 1001 aa15.67■□□□□ 0.1
RPS28-204ENST00000602140 TSPY3P0CV98 308 aa15.67■□□□□ 0.1
RPS28-204ENST00000602140 TSPY8P0CW00 308 aa15.67■□□□□ 0.1
RPS28-204ENST00000602140 AKR1A1P14550 325 aa15.67■□□□□ 0.1
RPS28-204ENST00000602140 PDE4BQ07343 736 aa15.67■□□□□ 0.1
RPS28-204ENST00000602140 ZMYM1Q5SVZ6 1142 aa15.67■□□□□ 0.1
RPS28-204ENST00000602140 RNF180Q86T96 592 aa15.67■□□□□ 0.1
RPS28-204ENST00000602140 LENG1Q96BZ8 264 aaPredicted RBP15.67■□□□□ 0.1
RPS28-204ENST00000602140 NAPBQ9H115 298 aa15.67■□□□□ 0.1
RPS28-204ENST00000602140 RAVER2Q9HCJ3 691 aaKnown RBP15.67■□□□□ 0.1
RPS28-204ENST00000602140 FEM1BQ9UK73 627 aa15.67■□□□□ 0.1
RPS28-204ENST00000602140 DNAJC25-GNG10A0A024R161 153 aa15.66■□□□□ 0.1
RPS28-204ENST00000602140 SLC3A2P08195 630 aaKnown RBP15.66■□□□□ 0.1
RPS28-204ENST00000602140 MX1P20591 662 aa15.66■□□□□ 0.1
RPS28-204ENST00000602140 TFAP4Q01664 338 aa15.66■□□□□ 0.1
RPS28-204ENST00000602140 TLE2Q04725 743 aa15.66■□□□□ 0.1
RPS28-204ENST00000602140 PPARAQ07869 468 aa15.66■□□□□ 0.1
RPS28-204ENST00000602140 C1orf53Q5VUE5 145 aa15.66■□□□□ 0.1
RPS28-204ENST00000602140 SH3RF1Q7Z6J0 888 aa15.66■□□□□ 0.1
RPS28-204ENST00000602140 MSL3Q8N5Y2 521 aaKnown RBP15.66■□□□□ 0.1
RPS28-204ENST00000602140 GMCL1P1Q8NEA9 526 aa15.66■□□□□ 0.1
RPS28-204ENST00000602140 NEDD1Q8NHV4 660 aa15.66■□□□□ 0.1
RPS28-204ENST00000602140 BADQ92934 168 aa15.66■□□□□ 0.1
RPS28-204ENST00000602140 SLC38A10Q9HBR0 1119 aa15.66■□□□□ 0.1
RPS28-204ENST00000602140 PDLIM7Q9NR12 457 aa15.66■□□□□ 0.1
RPS28-204ENST00000602140 SYNPO2Q9UMS6 1093 aa15.66■□□□□ 0.1
RPS28-204ENST00000602140 STXBP5LQ9Y2K9 1186 aa15.66■□□□□ 0.1
RPS28-204ENST00000602140 SMCHD1A6NHR9 2005 aa15.66■□□□□ 0.1
RPS28-204ENST00000602140 MYH4Q9Y623 1939 aa15.66■□□□□ 0.1
RPS28-204ENST00000602140 LTBP2Q14767 1821 aa15.66■□□□□ 0.1
RPS28-204ENST00000602140 PLIN4Q96Q06 1357 aa15.65■□□□□ 0.1
RPS28-204ENST00000602140 TRIM43BA6NCK2 446 aa15.65■□□□□ 0.1
RPS28-204ENST00000602140 SNAI1O95863 264 aaPredicted RBP15.65■□□□□ 0.1
RPS28-204ENST00000602140 BMP3P12645 472 aa15.65■□□□□ 0.1
RPS28-204ENST00000602140 SLFN13Q68D06 897 aa15.65■□□□□ 0.1
RPS28-204ENST00000602140 MAMDC4Q6UXC1 1216 aa15.65■□□□□ 0.1
RPS28-204ENST00000602140 ANKRD35Q8N283 1001 aa15.65■□□□□ 0.1
RPS28-204ENST00000602140 TRIM43Q96BQ3 446 aaPredicted RBP15.65■□□□□ 0.1
RPS28-204ENST00000602140 ISY1Q9ULR0 285 aaKnown RBP15.65■□□□□ 0.1
RPS28-204ENST00000602140 SYNGAP1Q96PV0 1343 aa15.65■□□□□ 0.1
RPS28-204ENST00000602140 A0A1W2PQ45 241 aaPredicted RBP15.64■□□□□ 0.09
RPS28-204ENST00000602140 A0A1W2PQY0 241 aa15.64■□□□□ 0.09
RPS28-204ENST00000602140 POTEB2H3BUK9 544 aa15.64■□□□□ 0.09
RPS28-204ENST00000602140 ADAMTS4O75173 837 aa15.64■□□□□ 0.09
RPS28-204ENST00000602140 SHHQ15465 462 aa15.64■□□□□ 0.09
RPS28-204ENST00000602140 CCDC129Q6ZRS4 1044 aa15.64■□□□□ 0.09
RPS28-204ENST00000602140 CHMP4CQ96CF2 233 aa15.64■□□□□ 0.09
RPS28-204ENST00000602140 FBXO40Q9UH90 709 aa15.64■□□□□ 0.09
RPS28-204ENST00000602140 ZHX1Q9UKY1 873 aaPredicted RBP15.64■□□□□ 0.09
RPS28-204ENST00000602140 FAM184BQ9ULE4 1060 aa15.64■□□□□ 0.09
RPS28-204ENST00000602140 TACC3Q9Y6A5 838 aa15.64■□□□□ 0.09
RPS28-204ENST00000602140 TMEM232C9JQI7 657 aa15.63■□□□□ 0.09
RPS28-204ENST00000602140 OAZ1P54368 228 aa15.63■□□□□ 0.09
RPS28-204ENST00000602140 RRP1P56182 461 aaKnown RBP15.63■□□□□ 0.09
RPS28-204ENST00000602140 C9orf50Q5SZB4 431 aa15.63■□□□□ 0.09
RPS28-204ENST00000602140 ANKRD45Q5TZF3 282 aa15.63■□□□□ 0.09
RPS28-204ENST00000602140 FAM109BQ6ICB4 259 aaPredicted RBP15.63■□□□□ 0.09
RPS28-204ENST00000602140 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.63■□□□□ 0.09
RPS28-204ENST00000602140 ZNF467Q7Z7K2 595 aaPredicted RBP15.63■□□□□ 0.09
RPS28-204ENST00000602140 CHST13Q8NET6 341 aa15.63■□□□□ 0.09
RPS28-204ENST00000602140 TSEN34Q9BSV6 310 aaKnown RBP15.63■□□□□ 0.09
RPS28-204ENST00000602140 HOMER2Q9NSB8 354 aa15.63■□□□□ 0.09
RPS28-204ENST00000602140 ZBTB47Q9UFB7 747 aaPredicted RBP15.63■□□□□ 0.09
RPS28-204ENST00000602140 SALL3Q9BXA9 1300 aa15.63■□□□□ 0.09
RPS28-204ENST00000602140 SYNRGQ9UMZ2 1314 aa15.63■□□□□ 0.09
RPS28-204ENST00000602140 A0A0C4DFX4 3053 aa15.62■□□□□ 0.09
RPS28-204ENST00000602140 DLL1O00548 723 aa15.62■□□□□ 0.09
RPS28-204ENST00000602140 FOXP2O15409 715 aa15.62■□□□□ 0.09
RPS28-204ENST00000602140 PQBP1O60828 265 aaKnown RBP15.62■□□□□ 0.09
RPS28-204ENST00000602140 CLTBP09497 229 aa15.62■□□□□ 0.09
RPS28-204ENST00000602140 FDX1P10109 184 aa15.62■□□□□ 0.09
RPS28-204ENST00000602140 ITGB8P26012 769 aa15.62■□□□□ 0.09
RPS28-204ENST00000602140 STAT2P52630 851 aa15.62■□□□□ 0.09
RPS28-204ENST00000602140 ACLYP53396 1101 aa15.62■□□□□ 0.09
RPS28-204ENST00000602140 CTDSPL2Q05D32 466 aa15.62■□□□□ 0.09
RPS28-204ENST00000602140 IKQ13123 557 aaPredicted RBP15.62■□□□□ 0.09
RPS28-204ENST00000602140 ACVR2BQ13705 512 aa15.62■□□□□ 0.09
RPS28-204ENST00000602140 FGD4Q96M96 766 aa15.62■□□□□ 0.09
RPS28-204ENST00000602140 FAM161BQ96MY7 647 aa15.62■□□□□ 0.09
RPS28-204ENST00000602140 INCENPQ9NQS7 918 aa15.62■□□□□ 0.09
RPS28-204ENST00000602140 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.62■□□□□ 0.09
RPS28-204ENST00000602140 STX8Q9UNK0 236 aa15.62■□□□□ 0.09
RPS28-204ENST00000602140 TSPY2A6NKD2 308 aa15.61■□□□□ 0.09
RPS28-204ENST00000602140 DUSP11O75319 330 aaKnown RBP15.61■□□□□ 0.09
RPS28-204ENST00000602140 MCCP23508 829 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms