RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 NECAB3Q96P71 396 aaPredicted RBP19.39■□□□□ 0.69
SSBP4-211ENST00000601614 SWAP70Q9UH65 585 aa19.39■□□□□ 0.69
SSBP4-211ENST00000601614 PPP1R9AQ9ULJ8 1098 aa19.39■□□□□ 0.69
SSBP4-211ENST00000601614 CNPY2Q9Y2B0 182 aa19.39■□□□□ 0.69
SSBP4-211ENST00000601614 PRKAB2O43741 272 aa19.38■□□□□ 0.69
SSBP4-211ENST00000601614 EEF2P13639 858 aaKnown RBP19.38■□□□□ 0.69
SSBP4-211ENST00000601614 MRPS5P82675 430 aaKnown RBP19.38■□□□□ 0.69
SSBP4-211ENST00000601614 AACSQ86V21 672 aa19.38■□□□□ 0.69
SSBP4-211ENST00000601614 PPP1R12CQ9BZL4 782 aa19.38■□□□□ 0.69
SSBP4-211ENST00000601614 ARMT1Q9H993 441 aa19.38■□□□□ 0.69
SSBP4-211ENST00000601614 CXXC1Q9P0U4 656 aaPredicted RBP19.38■□□□□ 0.69
SSBP4-211ENST00000601614 ELP1O95163 1332 aa19.37■□□□□ 0.69
SSBP4-211ENST00000601614 ASGR1P07306 291 aa19.37■□□□□ 0.69
SSBP4-211ENST00000601614 CST5P28325 142 aaPredicted RBP19.37■□□□□ 0.69
SSBP4-211ENST00000601614 FAM126BQ8IXS8 530 aa19.37■□□□□ 0.69
SSBP4-211ENST00000601614 NKX2-4Q9H2Z4 354 aa19.37■□□□□ 0.69
SSBP4-211ENST00000601614 SH2D4AQ9H788 454 aa19.37■□□□□ 0.69
SSBP4-211ENST00000601614 ZHX1Q9UKY1 873 aaPredicted RBP19.37■□□□□ 0.69
SSBP4-211ENST00000601614 FAM184BQ9ULE4 1060 aa19.37■□□□□ 0.69
SSBP4-211ENST00000601614 EXOC6BQ9Y2D4 811 aa19.37■□□□□ 0.69
SSBP4-211ENST00000601614 YBX2Q9Y2T7 364 aaKnown RBP19.37■□□□□ 0.69
SSBP4-211ENST00000601614 RIPK3Q9Y572 518 aa19.37■□□□□ 0.69
SSBP4-211ENST00000601614 MYH7P12883 1935 aa19.37■□□□□ 0.69
SSBP4-211ENST00000601614 SYNGAP1Q96PV0 1343 aa19.36■□□□□ 0.69
SSBP4-211ENST00000601614 DNAJC25-GNG10A0A024R161 153 aa19.36■□□□□ 0.69
SSBP4-211ENST00000601614 DUSP11O75319 330 aaKnown RBP19.36■□□□□ 0.69
SSBP4-211ENST00000601614 IGFBP4P22692 258 aa19.36■□□□□ 0.69
SSBP4-211ENST00000601614 CDK8P49336 464 aa19.36■□□□□ 0.69
SSBP4-211ENST00000601614 FAM83BQ5T0W9 1011 aa19.36■□□□□ 0.69
SSBP4-211ENST00000601614 MAMDC4Q6UXC1 1216 aa19.36■□□□□ 0.69
SSBP4-211ENST00000601614 GLT1D1Q96MS3 346 aa19.36■□□□□ 0.69
SSBP4-211ENST00000601614 MROH7Q68CQ1 1323 aa19.35■□□□□ 0.69
SSBP4-211ENST00000601614 ARVCFO00192 962 aa19.35■□□□□ 0.69
SSBP4-211ENST00000601614 C6orf222P0C671 652 aaPredicted RBP19.35■□□□□ 0.69
SSBP4-211ENST00000601614 CYP2C18P33260 490 aa19.35■□□□□ 0.69
SSBP4-211ENST00000601614 MSL3Q8N5Y2 521 aaKnown RBP19.35■□□□□ 0.69
SSBP4-211ENST00000601614 FGD4Q96M96 766 aa19.35■□□□□ 0.69
SSBP4-211ENST00000601614 NUP88Q99567 741 aaPredicted RBP19.35■□□□□ 0.69
SSBP4-211ENST00000601614 IL1RAPL2Q9NP60 686 aa19.35■□□□□ 0.69
SSBP4-211ENST00000601614 UMODL1Q5DID0 1318 aa19.34■□□□□ 0.69
SSBP4-211ENST00000601614 MYH4Q9Y623 1939 aa19.34■□□□□ 0.69
SSBP4-211ENST00000601614 CTAGE5O15320 804 aa19.34■□□□□ 0.69
SSBP4-211ENST00000601614 CHGBP05060 677 aa19.34■□□□□ 0.69
SSBP4-211ENST00000601614 TTF1Q15361 905 aaPredicted RBP19.34■□□□□ 0.69
SSBP4-211ENST00000601614 C12orf60Q5U649 245 aa19.34■□□□□ 0.69
SSBP4-211ENST00000601614 PSRC1Q6PGN9 363 aaPredicted RBP19.34■□□□□ 0.69
SSBP4-211ENST00000601614 TMEM199Q8N511 208 aa19.34■□□□□ 0.69
SSBP4-211ENST00000601614 HERVK_113Q902F9 699 aa19.34■□□□□ 0.69
SSBP4-211ENST00000601614 FAM122AQ96E09 287 aa19.34■□□□□ 0.69
SSBP4-211ENST00000601614 CCDC17Q96LX7 622 aa19.34■□□□□ 0.69
SSBP4-211ENST00000601614 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.34■□□□□ 0.69
SSBP4-211ENST00000601614 UPF3AQ9H1J1 476 aaKnown RBP19.34■□□□□ 0.69
SSBP4-211ENST00000601614 PRRC2BQ5JSZ5 2229 aaKnown RBP19.34■□□□□ 0.69
SSBP4-211ENST00000601614 A0A0U1RQG5 324 aaPredicted RBP19.33■□□□□ 0.68
SSBP4-211ENST00000601614 GOLIM4O00461 696 aa19.33■□□□□ 0.68
SSBP4-211ENST00000601614 CD4P01730 458 aa19.33■□□□□ 0.68
SSBP4-211ENST00000601614 RLBP1P12271 317 aa19.33■□□□□ 0.68
SSBP4-211ENST00000601614 TFF2Q03403 129 aa19.33■□□□□ 0.68
SSBP4-211ENST00000601614 ACVR2BQ13705 512 aa19.33■□□□□ 0.68
SSBP4-211ENST00000601614 RAB30Q15771 203 aa19.33■□□□□ 0.68
SSBP4-211ENST00000601614 ZKSCAN2Q63HK3 967 aa19.33■□□□□ 0.68
SSBP4-211ENST00000601614 SNRNP48Q6IEG0 339 aaKnown RBP19.33■□□□□ 0.68
SSBP4-211ENST00000601614 CEP85Q6P2H3 762 aa19.33■□□□□ 0.68
SSBP4-211ENST00000601614 CCDC174Q6PII3 467 aa19.33■□□□□ 0.68
SSBP4-211ENST00000601614 C16orf86Q6ZW13 317 aa19.33■□□□□ 0.68
SSBP4-211ENST00000601614 VTI1AQ96AJ9 217 aa19.33■□□□□ 0.68
SSBP4-211ENST00000601614 DNAJC2Q99543 621 aaKnown RBP19.33■□□□□ 0.68
SSBP4-211ENST00000601614 IL23AQ9NPF7 189 aa19.33■□□□□ 0.68
SSBP4-211ENST00000601614 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.33■□□□□ 0.68
SSBP4-211ENST00000601614 MSRAQ9UJ68 235 aa19.33■□□□□ 0.68
SSBP4-211ENST00000601614 LRRC37A2A6NM11 1700 aa19.32■□□□□ 0.68
SSBP4-211ENST00000601614 USP17L12C9JPN9 530 aa19.32■□□□□ 0.68
SSBP4-211ENST00000601614 USP17L21D6R901 530 aa19.32■□□□□ 0.68
SSBP4-211ENST00000601614 APBB1O00213 710 aa19.32■□□□□ 0.68
SSBP4-211ENST00000601614 RAD21O60216 631 aa19.32■□□□□ 0.68
SSBP4-211ENST00000601614 MBD4O95243 580 aa19.32■□□□□ 0.68
SSBP4-211ENST00000601614 BMP1P13497 986 aa19.32■□□□□ 0.68
SSBP4-211ENST00000601614 COPB2P35606 906 aa19.32■□□□□ 0.68
SSBP4-211ENST00000601614 GJA9P57773 515 aa19.32■□□□□ 0.68
SSBP4-211ENST00000601614 CCDC144BQ3MJ40 725 aa19.32■□□□□ 0.68
SSBP4-211ENST00000601614 PCSK9Q8NBP7 692 aaKnown RBP19.32■□□□□ 0.68
SSBP4-211ENST00000601614 TEX13BQ9BXU2 312 aa19.32■□□□□ 0.68
SSBP4-211ENST00000601614 GOPCQ9HD26 462 aa19.32■□□□□ 0.68
SSBP4-211ENST00000601614 XIRP2A4UGR9 3374 aa19.32■□□□□ 0.68
SSBP4-211ENST00000601614 HOXD11P31277 338 aaPredicted RBP19.31■□□□□ 0.68
SSBP4-211ENST00000601614 RABGGTBP53611 331 aa19.31■□□□□ 0.68
SSBP4-211ENST00000601614 DDX11Q96FC9 970 aa19.31■□□□□ 0.68
SSBP4-211ENST00000601614 SLF1Q9BQI6 1058 aa19.31■□□□□ 0.68
SSBP4-211ENST00000601614 KATNBL1Q9H079 304 aa19.31■□□□□ 0.68
SSBP4-211ENST00000601614 KANSL2Q9H9L4 492 aa19.31■□□□□ 0.68
SSBP4-211ENST00000601614 ATP8A2Q9NTI2 1148 aa19.31■□□□□ 0.68
SSBP4-211ENST00000601614 MYOGP15173 224 aa19.3■□□□□ 0.68
SSBP4-211ENST00000601614 BEX3Q00994 111 aa19.3■□□□□ 0.68
SSBP4-211ENST00000601614 GNASQ5JWF2 1037 aa19.3■□□□□ 0.68
SSBP4-211ENST00000601614 OTOP2Q7RTS6 562 aa19.3■□□□□ 0.68
SSBP4-211ENST00000601614 ZNF467Q7Z7K2 595 aaPredicted RBP19.3■□□□□ 0.68
SSBP4-211ENST00000601614 VWCEQ96DN2 955 aa19.3■□□□□ 0.68
SSBP4-211ENST00000601614 SLC28A3Q9HAS3 691 aa19.3■□□□□ 0.68
SSBP4-211ENST00000601614 SCN5AQ14524 2016 aa19.3■□□□□ 0.68
SSBP4-211ENST00000601614 ASTN1O14525 1302 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms