RNA–Protein interactions for RNA: ENST00000601471.1

LINC00649-212, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-212ENST00000601471 MTFR1Q15390 333 aa11.28□□□□□ -0.6
LINC00649-212ENST00000601471 BTNL9Q6UXG8 535 aa11.28□□□□□ -0.6
LINC00649-212ENST00000601471 TRMT44Q8IYL2 757 aaKnown RBP11.28□□□□□ -0.6
LINC00649-212ENST00000601471 ENAHQ8N8S7 591 aaPredicted RBP11.28□□□□□ -0.6
LINC00649-212ENST00000601471 KRT23Q9C075 422 aa11.28□□□□□ -0.6
LINC00649-212ENST00000601471 PPP4R2Q9NY27 417 aa11.28□□□□□ -0.6
LINC00649-212ENST00000601471 ZSWIM5Q9P217 1185 aa11.28□□□□□ -0.6
LINC00649-212ENST00000601471 LAMA2P24043 3122 aaKnown RBP11.28□□□□□ -0.6
LINC00649-212ENST00000601471 FRMPD3Q5JV73 1810 aa11.28□□□□□ -0.6
LINC00649-212ENST00000601471 PLXNA1Q9UIW2 1896 aa11.27□□□□□ -0.6
LINC00649-212ENST00000601471 RAD21O60216 631 aa11.27□□□□□ -0.61
LINC00649-212ENST00000601471 CDC45O75419 566 aa11.27□□□□□ -0.61
LINC00649-212ENST00000601471 STAT3P40763 770 aa11.27□□□□□ -0.61
LINC00649-212ENST00000601471 UBXN2AP68543 259 aa11.27□□□□□ -0.61
LINC00649-212ENST00000601471 CCDC178Q5BJE1 867 aa11.27□□□□□ -0.61
LINC00649-212ENST00000601471 STOX1Q6ZVD7 989 aa11.27□□□□□ -0.61
LINC00649-212ENST00000601471 FAM160B2Q86V87 743 aa11.27□□□□□ -0.61
LINC00649-212ENST00000601471 IQCA1Q86XH1 822 aa11.27□□□□□ -0.61
LINC00649-212ENST00000601471 SHISA4Q96DD7 197 aa11.27□□□□□ -0.61
LINC00649-212ENST00000601471 ZSCAN10Q96SZ4 725 aaPredicted RBP11.27□□□□□ -0.61
LINC00649-212ENST00000601471 RBM8AQ9Y5S9 174 aaKnown RBP11.27□□□□□ -0.61
LINC00649-212ENST00000601471 ZNF536O15090 1300 aa11.27□□□□□ -0.61
LINC00649-212ENST00000601471 TNKSO95271 1327 aa11.27□□□□□ -0.61
LINC00649-212ENST00000601471 PDE4DIPQ5VU43 2346 aa11.26□□□□□ -0.61
LINC00649-212ENST00000601471 TMEM232C9JQI7 657 aa11.26□□□□□ -0.61
LINC00649-212ENST00000601471 E7EWF7 191 aa11.26□□□□□ -0.61
LINC00649-212ENST00000601471 GJB1P08034 283 aa11.26□□□□□ -0.61
LINC00649-212ENST00000601471 CCL5P13501 91 aa11.26□□□□□ -0.61
LINC00649-212ENST00000601471 CYP2B6P20813 491 aa11.26□□□□□ -0.61
LINC00649-212ENST00000601471 ADORA2AP29274 412 aa11.26□□□□□ -0.61
LINC00649-212ENST00000601471 GJA8P48165 433 aa11.26□□□□□ -0.61
LINC00649-212ENST00000601471 ZNF543Q08ER8 600 aa11.26□□□□□ -0.61
LINC00649-212ENST00000601471 NECTIN1Q15223 517 aa11.26□□□□□ -0.61
LINC00649-212ENST00000601471 SEC23AQ15436 765 aa11.26□□□□□ -0.61
LINC00649-212ENST00000601471 KCTD1Q719H9 257 aa11.26□□□□□ -0.61
LINC00649-212ENST00000601471 CYB5R4Q7L1T6 521 aa11.26□□□□□ -0.61
LINC00649-212ENST00000601471 UBE2Q1Q7Z7E8 422 aa11.26□□□□□ -0.61
LINC00649-212ENST00000601471 CCAR1Q8IX12 1150 aaKnown RBP11.26□□□□□ -0.61
LINC00649-212ENST00000601471 MB21D2Q8IYB1 491 aaPredicted RBP11.26□□□□□ -0.61
LINC00649-212ENST00000601471 CHURC1Q8WUH1 139 aa11.26□□□□□ -0.61
LINC00649-212ENST00000601471 KIFC2Q96AC6 838 aa11.26□□□□□ -0.61
LINC00649-212ENST00000601471 ZKSCAN3Q9BRR0 538 aa11.26□□□□□ -0.61
LINC00649-212ENST00000601471 UNC93B1Q9H1C4 597 aa11.26□□□□□ -0.61
LINC00649-212ENST00000601471 FLRT1Q9NZU1 646 aa11.26□□□□□ -0.61
LINC00649-212ENST00000601471 RIPK3Q9Y572 518 aa11.26□□□□□ -0.61
LINC00649-212ENST00000601471 IVNS1ABPQ9Y6Y0 642 aa11.26□□□□□ -0.61
LINC00649-212ENST00000601471 ZNFX1Q9P2E3 1918 aaKnown RBP11.26□□□□□ -0.61
LINC00649-212ENST00000601471 LAMA3Q16787 3333 aa11.26□□□□□ -0.61
LINC00649-212ENST00000601471 ZBED4O75132 1171 aa11.25□□□□□ -0.61
LINC00649-212ENST00000601471 ZKSCAN1P17029 563 aaPredicted RBP11.25□□□□□ -0.61
LINC00649-212ENST00000601471 CAPN2P17655 700 aa11.25□□□□□ -0.61
LINC00649-212ENST00000601471 TRIM32Q13049 653 aa11.25□□□□□ -0.61
LINC00649-212ENST00000601471 PLS1Q14651 629 aa11.25□□□□□ -0.61
LINC00649-212ENST00000601471 CCL14Q16627 93 aa11.25□□□□□ -0.61
LINC00649-212ENST00000601471 OLFML2BQ68BL8 750 aa11.25□□□□□ -0.61
LINC00649-212ENST00000601471 SNRNP48Q6IEG0 339 aaKnown RBP11.25□□□□□ -0.61
LINC00649-212ENST00000601471 NCAPG2Q86XI2 1143 aa11.25□□□□□ -0.61
LINC00649-212ENST00000601471 PNMA1Q8ND90 353 aa11.25□□□□□ -0.61
LINC00649-212ENST00000601471 MTA3Q9BTC8 594 aa11.25□□□□□ -0.61
LINC00649-212ENST00000601471 TMEM106CQ9BVX2 250 aa11.25□□□□□ -0.61
LINC00649-212ENST00000601471 CRISPLD2Q9H0B8 497 aa11.25□□□□□ -0.61
LINC00649-212ENST00000601471 RANBP17Q9H2T7 1088 aaKnown RBP11.25□□□□□ -0.61
LINC00649-212ENST00000601471 PRR12Q9ULL5 1215 aa11.25□□□□□ -0.61
LINC00649-212ENST00000601471 LCTP09848 1927 aa11.25□□□□□ -0.61
LINC00649-212ENST00000601471 LRRC37A2A6NM11 1700 aa11.24□□□□□ -0.61
LINC00649-212ENST00000601471 DNAJC25-GNG10A0A024R161 153 aa11.24□□□□□ -0.61
LINC00649-212ENST00000601471 SLC27A2O14975 620 aa11.24□□□□□ -0.61
LINC00649-212ENST00000601471 COBLO75128 1261 aa11.24□□□□□ -0.61
LINC00649-212ENST00000601471 FCER1AP12319 257 aa11.24□□□□□ -0.61
LINC00649-212ENST00000601471 PRKAR2AP13861 404 aaKnown RBP11.24□□□□□ -0.61
LINC00649-212ENST00000601471 EN2P19622 333 aaPredicted RBP11.24□□□□□ -0.61
LINC00649-212ENST00000601471 ANTXR2P58335 489 aa11.24□□□□□ -0.61
LINC00649-212ENST00000601471 MLLT1Q03111 559 aaPredicted RBP11.24□□□□□ -0.61
LINC00649-212ENST00000601471 GPATCH4Q5T3I0 446 aaKnown RBP11.24□□□□□ -0.61
LINC00649-212ENST00000601471 WDR78Q5VTH9 848 aa11.24□□□□□ -0.61
LINC00649-212ENST00000601471 KIAA1211Q6ZU35 1233 aa11.24□□□□□ -0.61
LINC00649-212ENST00000601471 POTEDQ86YR6 584 aa11.24□□□□□ -0.61
LINC00649-212ENST00000601471 NCOA7Q8NI08 942 aa11.24□□□□□ -0.61
LINC00649-212ENST00000601471 NPLOC4Q8TAT6 608 aa11.24□□□□□ -0.61
LINC00649-212ENST00000601471 UBAC1Q9BSL1 405 aa11.24□□□□□ -0.61
LINC00649-212ENST00000601471 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.24□□□□□ -0.61
LINC00649-212ENST00000601471 RNF208Q9H0X6 261 aa11.24□□□□□ -0.61
LINC00649-212ENST00000601471 CWC22Q9HCG8 908 aaKnown RBP11.24□□□□□ -0.61
LINC00649-212ENST00000601471 ANO2Q9NQ90 1003 aa11.24□□□□□ -0.61
LINC00649-212ENST00000601471 DIS3Q9Y2L1 958 aaKnown RBP11.24□□□□□ -0.61
LINC00649-212ENST00000601471 RPTORQ8N122 1335 aa11.24□□□□□ -0.61
LINC00649-212ENST00000601471 ICAM1P05362 532 aa11.23□□□□□ -0.61
LINC00649-212ENST00000601471 CACNB2Q08289 660 aaPredicted RBP11.23□□□□□ -0.61
LINC00649-212ENST00000601471 TRDNQ13061 729 aa11.23□□□□□ -0.61
LINC00649-212ENST00000601471 KCTD2Q14681 263 aa11.23□□□□□ -0.61
LINC00649-212ENST00000601471 CCDC96Q2M329 555 aa11.23□□□□□ -0.61
LINC00649-212ENST00000601471 ZNF792Q3KQV3 632 aa11.23□□□□□ -0.61
LINC00649-212ENST00000601471 TKFCQ3LXA3 575 aa11.23□□□□□ -0.61
LINC00649-212ENST00000601471 TSGA10IPQ3SY00 556 aa11.23□□□□□ -0.61
LINC00649-212ENST00000601471 IFIT1BQ5T764 474 aaKnown RBP11.23□□□□□ -0.61
LINC00649-212ENST00000601471 SYDE2Q5VT97 1194 aa11.23□□□□□ -0.61
LINC00649-212ENST00000601471 CREB3L3Q68CJ9 461 aa11.23□□□□□ -0.61
LINC00649-212ENST00000601471 TTBK2Q6IQ55 1244 aa11.23□□□□□ -0.61
LINC00649-212ENST00000601471 SAMD1Q6SPF0 538 aaPredicted RBP11.23□□□□□ -0.61
LINC00649-212ENST00000601471 CASC1Q6TDU7 716 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms