RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-233	ENST00000600778	CHMP4C	Q96CF2	233 aa		13.74	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	FEM1B	Q9UK73	627 aa		13.74	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	ISY1	Q9ULR0	285 aa	Known RBP	13.74	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	ALPK3	Q96L96	1907 aa		13.74	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	PLIN4	Q96Q06	1357 aa		13.73	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	RANBP6	O60518	1105 aa	Known RBP	13.73	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	FGA	P02671	866 aa		13.73	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	COL6A1	P12109	1028 aa		13.73	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	BMP3	P12645	472 aa		13.73	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	COPB2	P35606	906 aa		13.73	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	FXR1	P51114	621 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	ALX1	Q15699	326 aa		13.73	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	SNRNP48	Q6IEG0	339 aa	Known RBP	13.73	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.73	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	PLEKHM2	Q8IWE5	1019 aa		13.73	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	TEX13B	Q9BXU2	312 aa		13.73	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	ANAPC4	Q9UJX5	808 aa		13.73	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.73	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	SYNPO2	Q9UMS6	1093 aa		13.73	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	STX8	Q9UNK0	236 aa		13.73	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	RIPK3	Q9Y572	518 aa		13.73	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	TACC3	Q9Y6A5	838 aa		13.73	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.72	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	TMEM232	C9JQI7	657 aa		13.72	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	NMT2	O60551	498 aa		13.72	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	HSPD1	P10809	573 aa	Known RBP	13.72	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	SYN1	P17600	705 aa		13.72	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	ZNF792	Q3KQV3	632 aa		13.72	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	TICAM2	Q86XR7	235 aa		13.72	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.72	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	RAVER2	Q9HCJ3	691 aa	Known RBP	13.72	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	IL17RB	Q9NRM6	502 aa		13.72	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	TOMM22	Q9NS69	142 aa		13.72	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	RANBP2	P49792	3224 aa	Known RBP	13.71	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	FRMPD3	Q5JV73	1810 aa		13.71	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	SEPT4	O43236	478 aa		13.71	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	CENPB	P07199	599 aa	Predicted RBP	13.71	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	SDS	P20132	328 aa		13.71	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	MCC	P23508	829 aa		13.71	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	IK	Q13123	557 aa	Predicted RBP	13.71	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	LRRC26	Q2I0M4	334 aa		13.71	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	RRP12	Q5JTH9	1297 aa	Known RBP	13.71	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	PPP4R3B	Q5MIZ7	849 aa		13.71	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	GJC2	Q5T442	439 aa	Predicted RBP	13.71	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	DDX11	Q96FC9	970 aa		13.71	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	TINF2	Q9BSI4	451 aa		13.71	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	PRO3102	Q9H379	93 aa		13.71	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	OSBPL3	Q9H4L5	887 aa		13.71	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	SLC38A10	Q9HBR0	1119 aa		13.71	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	DIS3	Q9Y2L1	958 aa	Known RBP	13.71	□□□□□ -0.21
SOX2-OT-233	ENST00000600778	CCDC171	Q6TFL3	1326 aa		13.7	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	DNM1L	O00429	736 aa		13.7	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	ATP2A1	O14983	1001 aa		13.7	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	ORC4	O43929	436 aa		13.7	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	MYCN	P04198	464 aa	Predicted RBP	13.7	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	SLC1A4	P43007	532 aa		13.7	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	STAT2	P52630	851 aa		13.7	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	HAND2	P61296	217 aa		13.7	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	ARRDC4	Q8NCT1	418 aa		13.7	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	CHURC1	Q8WUH1	139 aa		13.7	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	GMCL1	Q96IK5	515 aa		13.7	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	MTMR7	Q9Y216	660 aa		13.7	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	CEP290	O15078	2479 aa		13.7	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	FGR	P09769	529 aa		13.69	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	TAL1	P17542	331 aa	Predicted RBP	13.69	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	ATN1	P54259	1190 aa	Predicted RBP	13.69	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	MFAP1	P55081	439 aa	Known RBP	13.69	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	KCTD1	Q719H9	257 aa		13.69	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	FAM160B2	Q86V87	743 aa		13.69	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	STAG1	Q8WVM7	1258 aa		13.69	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	PCDH10	Q9P2E7	1040 aa		13.69	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	SZT2	Q5T011	3432 aa		13.69	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	KBTBD13	C9JR72	458 aa		13.68	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	FDX1	P10109	184 aa		13.68	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	OAZ1	P54368	228 aa		13.68	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	RCSD1	Q6JBY9	416 aa		13.68	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	CWC27	Q6UX04	472 aa	Known RBP	13.68	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	RASGRP2	Q7LDG7	609 aa		13.68	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	ANKRD35	Q8N283	1001 aa		13.68	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	GDF15	Q99988	308 aa		13.68	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	HOMER2	Q9NSB8	354 aa		13.68	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	PLXNA1	Q9UIW2	1896 aa		13.67	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	ZMYM6	O95789	1325 aa		13.67	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	DNAJC25-GNG10	A0A024R161	153 aa		13.67	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	PLA2G6	O60733	806 aa		13.67	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.67	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	NOV	P48745	357 aa		13.67	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	SNAP25	P60880	206 aa		13.67	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	MFSD6	Q6ZSS7	791 aa		13.67	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	CHST13	Q8NET6	341 aa		13.67	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	AGBL1	Q96MI9	1066 aa		13.67	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	DIAPH3	Q9NSV4	1193 aa		13.67	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	FBXO40	Q9UH90	709 aa		13.67	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	NRBP1	Q9UHY1	535 aa		13.67	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	CNPY2	Q9Y2B0	182 aa		13.67	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	HIP1	O00291	1037 aa		13.66	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	ZNF213	O14771	459 aa		13.66	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	RARB	P10826	455 aa		13.66	□□□□□ -0.22
SOX2-OT-233	ENST00000600778	AKR1A1	P14550	325 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms