RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 PATL2C9JE40 543 aaKnown RBP14.93□□□□□ -0.02
UPF1-208ENST00000600012 KBTBD13C9JR72 458 aa14.93□□□□□ -0.02
UPF1-208ENST00000600012 WDR46O15213 610 aaKnown RBP14.93□□□□□ -0.02
UPF1-208ENST00000600012 SEPT4O43236 478 aa14.93□□□□□ -0.02
UPF1-208ENST00000600012 FGAP02671 866 aa14.93□□□□□ -0.02
UPF1-208ENST00000600012 CYP21A2P08686 494 aa14.93□□□□□ -0.02
UPF1-208ENST00000600012 AKR1B1P15121 316 aa14.93□□□□□ -0.02
UPF1-208ENST00000600012 TDO2P48775 406 aa14.93□□□□□ -0.02
UPF1-208ENST00000600012 ATN1P54259 1190 aaPredicted RBP14.93□□□□□ -0.02
UPF1-208ENST00000600012 PLS1Q14651 629 aa14.93□□□□□ -0.02
UPF1-208ENST00000600012 RABEP1Q15276 862 aa14.93□□□□□ -0.02
UPF1-208ENST00000600012 C12orf60Q5U649 245 aa14.93□□□□□ -0.02
UPF1-208ENST00000600012 RNF20Q5VTR2 975 aa14.93□□□□□ -0.02
UPF1-208ENST00000600012 NCAPG2Q86XI2 1143 aa14.93□□□□□ -0.02
UPF1-208ENST00000600012 CLEC10AQ8IUN9 316 aa14.93□□□□□ -0.02
UPF1-208ENST00000600012 SIAH1Q8IUQ4 282 aa14.93□□□□□ -0.02
UPF1-208ENST00000600012 IFNL3Q8IZI9 196 aa14.93□□□□□ -0.02
UPF1-208ENST00000600012 ATG4CQ96DT6 458 aa14.93□□□□□ -0.02
UPF1-208ENST00000600012 IL17RAQ96F46 866 aa14.93□□□□□ -0.02
UPF1-208ENST00000600012 MTMR10Q9NXD2 777 aa14.93□□□□□ -0.02
UPF1-208ENST00000600012 PRKAG2Q9UGJ0 569 aa14.93□□□□□ -0.02
UPF1-208ENST00000600012 STXBP5LQ9Y2K9 1186 aa14.93□□□□□ -0.02
UPF1-208ENST00000600012 COL6A3P12111 3177 aa14.93□□□□□ -0.02
UPF1-208ENST00000600012 PLXNA1Q9UIW2 1896 aa14.93□□□□□ -0.02
UPF1-208ENST00000600012 ZMYM6O95789 1325 aa14.92□□□□□ -0.02
UPF1-208ENST00000600012 SMCHD1A6NHR9 2005 aa14.92□□□□□ -0.02
UPF1-208ENST00000600012 DLL1O00548 723 aa14.92□□□□□ -0.02
UPF1-208ENST00000600012 COBLO75128 1261 aa14.92□□□□□ -0.02
UPF1-208ENST00000600012 CDK8P49336 464 aa14.92□□□□□ -0.02
UPF1-208ENST00000600012 RTP1P59025 263 aa14.92□□□□□ -0.02
UPF1-208ENST00000600012 HAND2P61296 217 aa14.92□□□□□ -0.02
UPF1-208ENST00000600012 ADCK5Q3MIX3 580 aa14.92□□□□□ -0.02
UPF1-208ENST00000600012 GJC2Q5T442 439 aaPredicted RBP14.92□□□□□ -0.02
UPF1-208ENST00000600012 C16orf86Q6ZW13 317 aa14.92□□□□□ -0.02
UPF1-208ENST00000600012 SPICE1Q8N0Z3 855 aa14.92□□□□□ -0.02
UPF1-208ENST00000600012 NAPBQ9H115 298 aa14.92□□□□□ -0.02
UPF1-208ENST00000600012 CTNNA3Q9UI47 895 aa14.92□□□□□ -0.02
UPF1-208ENST00000600012 USP17L12C9JPN9 530 aa14.91□□□□□ -0.02
UPF1-208ENST00000600012 USP17L21D6R901 530 aa14.91□□□□□ -0.02
UPF1-208ENST00000600012 SLC25A27O95847 323 aa14.91□□□□□ -0.02
UPF1-208ENST00000600012 FCER1AP12319 257 aa14.91□□□□□ -0.02
UPF1-208ENST00000600012 ALX1Q15699 326 aa14.91□□□□□ -0.02
UPF1-208ENST00000600012 IMMTQ16891 758 aaKnown RBP14.91□□□□□ -0.02
UPF1-208ENST00000600012 STOX1Q6ZVD7 989 aa14.91□□□□□ -0.02
UPF1-208ENST00000600012 MAML3Q96JK9 1138 aa14.91□□□□□ -0.02
UPF1-208ENST00000600012 JAKMIP1Q96N16 626 aaKnown RBP14.91□□□□□ -0.02
UPF1-208ENST00000600012 UPF3BQ9BZI7 483 aaKnown RBP14.91□□□□□ -0.02
UPF1-208ENST00000600012 NACAP1Q9BZK3 213 aa14.91□□□□□ -0.02
UPF1-208ENST00000600012 GREB1LQ9C091 1923 aaPredicted RBP14.9□□□□□ -0.02
UPF1-208ENST00000600012 CYP2D7A0A087X1C5 515 aa14.9□□□□□ -0.02
UPF1-208ENST00000600012 CPA1P15085 419 aa14.9□□□□□ -0.02
UPF1-208ENST00000600012 COL9A3Q14050 684 aaPredicted RBP14.9□□□□□ -0.02
UPF1-208ENST00000600012 ANO1Q5XXA6 986 aa14.9□□□□□ -0.02
UPF1-208ENST00000600012 SAMD1Q6SPF0 538 aaPredicted RBP14.9□□□□□ -0.02
UPF1-208ENST00000600012 KANSL2Q9H9L4 492 aa14.9□□□□□ -0.02
UPF1-208ENST00000600012 ADAMTS5Q9UNA0 930 aa14.9□□□□□ -0.02
UPF1-208ENST00000600012 ATP11BQ9Y2G3 1177 aa14.9□□□□□ -0.02
UPF1-208ENST00000600012 CUL9Q8IWT3 2517 aa14.89□□□□□ -0.03
UPF1-208ENST00000600012 ZNF213O14771 459 aa14.89□□□□□ -0.03
UPF1-208ENST00000600012 CD2BP2O95400 341 aaKnown RBP14.89□□□□□ -0.03
UPF1-208ENST00000600012 EEF2P13639 858 aaKnown RBP14.89□□□□□ -0.03
UPF1-208ENST00000600012 CASTP20810 708 aaKnown RBP14.89□□□□□ -0.03
UPF1-208ENST00000600012 TMEM132BQ14DG7 1078 aa14.89□□□□□ -0.03
UPF1-208ENST00000600012 FAM109BQ6ICB4 259 aaPredicted RBP14.89□□□□□ -0.03
UPF1-208ENST00000600012 SLC39A5Q6ZMH5 540 aa14.89□□□□□ -0.03
UPF1-208ENST00000600012 TBC1D10CQ8IV04 446 aa14.89□□□□□ -0.03
UPF1-208ENST00000600012 GOPCQ9HD26 462 aa14.89□□□□□ -0.03
UPF1-208ENST00000600012 ARPP21Q9UBL0 812 aaPredicted RBP14.89□□□□□ -0.03
UPF1-208ENST00000600012 NRBP1Q9UHY1 535 aa14.89□□□□□ -0.03
UPF1-208ENST00000600012 DNAH12Q6ZR08 3092 aa14.89□□□□□ -0.03
UPF1-208ENST00000600012 E7EWF7 191 aa14.88□□□□□ -0.03
UPF1-208ENST00000600012 SMIM22K7EJ46 135 aa14.88□□□□□ -0.03
UPF1-208ENST00000600012 MYCNP04198 464 aaPredicted RBP14.88□□□□□ -0.03
UPF1-208ENST00000600012 COPB2P35606 906 aa14.88□□□□□ -0.03
UPF1-208ENST00000600012 NEK4P51957 841 aa14.88□□□□□ -0.03
UPF1-208ENST00000600012 CTDSPL2Q05D32 466 aa14.88□□□□□ -0.03
UPF1-208ENST00000600012 KRT32Q14532 448 aa14.88□□□□□ -0.03
UPF1-208ENST00000600012 SNX17Q15036 470 aa14.88□□□□□ -0.03
UPF1-208ENST00000600012 LRRC41Q15345 812 aa14.88□□□□□ -0.03
UPF1-208ENST00000600012 TSGA10IPQ3SY00 556 aa14.88□□□□□ -0.03
UPF1-208ENST00000600012 FAM47AQ5JRC9 791 aa14.88□□□□□ -0.03
UPF1-208ENST00000600012 PRAMEF19Q5SWL8 479 aa14.88□□□□□ -0.03
UPF1-208ENST00000600012 CTR9Q6PD62 1173 aa14.88□□□□□ -0.03
UPF1-208ENST00000600012 RIOX2Q8IUF8 465 aa14.88□□□□□ -0.03
UPF1-208ENST00000600012 MMP19Q99542 508 aa14.88□□□□□ -0.03
UPF1-208ENST00000600012 PPP1R9AQ9ULJ8 1098 aa14.88□□□□□ -0.03
UPF1-208ENST00000600012 ROBO3Q96MS0 1386 aa14.87□□□□□ -0.03
UPF1-208ENST00000600012 MINDY4BA8MYZ0 360 aa14.87□□□□□ -0.03
UPF1-208ENST00000600012 POTEB2H3BUK9 544 aa14.87□□□□□ -0.03
UPF1-208ENST00000600012 VWA5AO00534 786 aa14.87□□□□□ -0.03
UPF1-208ENST00000600012 STAT3P40763 770 aa14.87□□□□□ -0.03
UPF1-208ENST00000600012 ADCYAP1R1P41586 468 aa14.87□□□□□ -0.03
UPF1-208ENST00000600012 KCTD2Q14681 263 aa14.87□□□□□ -0.03
UPF1-208ENST00000600012 TRIM60Q495X7 471 aa14.87□□□□□ -0.03
UPF1-208ENST00000600012 C1orf53Q5VUE5 145 aa14.87□□□□□ -0.03
UPF1-208ENST00000600012 GIMAP6Q6P9H5 292 aa14.87□□□□□ -0.03
UPF1-208ENST00000600012 TM6SF1Q9BZW5 370 aa14.87□□□□□ -0.03
UPF1-208ENST00000600012 ZSWIM6Q9HCJ5 1215 aa14.87□□□□□ -0.03
UPF1-208ENST00000600012 FBXO28Q9NVF7 368 aa14.87□□□□□ -0.03
UPF1-208ENST00000600012 DIS3Q9Y2L1 958 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms