RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 HTATIP2Q9BUP3 242 aa16.67■□□□□ 0.26
LIG1-218ENST00000599322 TEX13BQ9BXU2 312 aa16.67■□□□□ 0.26
LIG1-218ENST00000599322 ADAMTS5Q9UNA0 930 aa16.67■□□□□ 0.26
LIG1-218ENST00000599322 TMEM232C9JQI7 657 aa16.66■□□□□ 0.26
LIG1-218ENST00000599322 HOXC6P09630 235 aa16.66■□□□□ 0.26
LIG1-218ENST00000599322 ADORA2AP29274 412 aa16.66■□□□□ 0.26
LIG1-218ENST00000599322 TRDNQ13061 729 aa16.66■□□□□ 0.26
LIG1-218ENST00000599322 CCDC96Q2M329 555 aa16.66■□□□□ 0.26
LIG1-218ENST00000599322 POTEEQ6S8J3 1075 aa16.66■□□□□ 0.26
LIG1-218ENST00000599322 KIAA1211Q6ZU35 1233 aa16.66■□□□□ 0.26
LIG1-218ENST00000599322 CPXCR1Q8N123 301 aa16.66■□□□□ 0.26
LIG1-218ENST00000599322 KRT23Q9C075 422 aa16.66■□□□□ 0.26
LIG1-218ENST00000599322 CNNM2Q9H8M5 875 aa16.66■□□□□ 0.26
LIG1-218ENST00000599322 INCENPQ9NQS7 918 aa16.66■□□□□ 0.26
LIG1-218ENST00000599322 TCP11L1Q9NUJ3 509 aa16.66■□□□□ 0.26
LIG1-218ENST00000599322 MTMR7Q9Y216 660 aa16.66■□□□□ 0.26
LIG1-218ENST00000599322 FARP2O94887 1054 aaPredicted RBP16.65■□□□□ 0.26
LIG1-218ENST00000599322 MCCP23508 829 aa16.65■□□□□ 0.26
LIG1-218ENST00000599322 SNRNP48Q6IEG0 339 aaKnown RBP16.65■□□□□ 0.26
LIG1-218ENST00000599322 RCSD1Q6JBY9 416 aa16.65■□□□□ 0.26
LIG1-218ENST00000599322 DCAF4Q8WV16 495 aa16.65■□□□□ 0.26
LIG1-218ENST00000599322 DPF3Q92784 378 aa16.65■□□□□ 0.26
LIG1-218ENST00000599322 DDX11Q96FC9 970 aa16.65■□□□□ 0.26
LIG1-218ENST00000599322 CCDC136Q96JN2 1154 aa16.65■□□□□ 0.26
LIG1-218ENST00000599322 PAK6Q9NQU5 681 aaPredicted RBP16.65■□□□□ 0.26
LIG1-218ENST00000599322 FBXO40Q9UH90 709 aa16.65■□□□□ 0.26
LIG1-218ENST00000599322 SZT2Q5T011 3432 aa16.65■□□□□ 0.26
LIG1-218ENST00000599322 GSPT1P15170 499 aaKnown RBP16.64■□□□□ 0.25
LIG1-218ENST00000599322 CNGA1P29973 690 aa16.64■□□□□ 0.25
LIG1-218ENST00000599322 OAZ1P54368 228 aa16.64■□□□□ 0.25
LIG1-218ENST00000599322 CHRDL2Q6WN34 429 aa16.64■□□□□ 0.25
LIG1-218ENST00000599322 ANKLE1Q8NAG6 615 aa16.64■□□□□ 0.25
LIG1-218ENST00000599322 IL17RBQ9NRM6 502 aa16.64■□□□□ 0.25
LIG1-218ENST00000599322 U3KPZ7 1027 aaPredicted RBP16.64■□□□□ 0.25
LIG1-218ENST00000599322 RANBP2P49792 3224 aaKnown RBP16.64■□□□□ 0.25
LIG1-218ENST00000599322 NMT2O60551 498 aa16.63■□□□□ 0.25
LIG1-218ENST00000599322 MSCO60682 206 aa16.63■□□□□ 0.25
LIG1-218ENST00000599322 PLA2G6O60733 806 aa16.63■□□□□ 0.25
LIG1-218ENST00000599322 CHMLP26374 656 aa16.63■□□□□ 0.25
LIG1-218ENST00000599322 CACNB2Q08289 660 aaPredicted RBP16.63■□□□□ 0.25
LIG1-218ENST00000599322 CCL14Q16627 93 aa16.63■□□□□ 0.25
LIG1-218ENST00000599322 CASC1Q6TDU7 716 aa16.63■□□□□ 0.25
LIG1-218ENST00000599322 CHMP4CQ96CF2 233 aa16.63■□□□□ 0.25
LIG1-218ENST00000599322 UBAC1Q9BSL1 405 aa16.63■□□□□ 0.25
LIG1-218ENST00000599322 PNMA2Q9UL42 364 aa16.63■□□□□ 0.25
LIG1-218ENST00000599322 GREB1LQ9C091 1923 aaPredicted RBP16.62■□□□□ 0.25
LIG1-218ENST00000599322 ATP2A1O14983 1001 aa16.62■□□□□ 0.25
LIG1-218ENST00000599322 TRIM32Q13049 653 aa16.62■□□□□ 0.25
LIG1-218ENST00000599322 MAP3K21Q5TCX8 1036 aa16.62■□□□□ 0.25
LIG1-218ENST00000599322 OLFML2BQ68BL8 750 aa16.62■□□□□ 0.25
LIG1-218ENST00000599322 KCTD1Q719H9 257 aa16.62■□□□□ 0.25
LIG1-218ENST00000599322 NECAB2Q7Z6G3 386 aa16.62■□□□□ 0.25
LIG1-218ENST00000599322 DGKHQ86XP1 1220 aa16.62■□□□□ 0.25
LIG1-218ENST00000599322 ANKRD35Q8N283 1001 aa16.62■□□□□ 0.25
LIG1-218ENST00000599322 CHST13Q8NET6 341 aa16.62■□□□□ 0.25
LIG1-218ENST00000599322 SLC38A10Q9HBR0 1119 aa16.62■□□□□ 0.25
LIG1-218ENST00000599322 RAVER2Q9HCJ3 691 aaKnown RBP16.62■□□□□ 0.25
LIG1-218ENST00000599322 RBM27Q9P2N5 1060 aaKnown RBP16.62■□□□□ 0.25
LIG1-218ENST00000599322 ZNF214Q9UL59 606 aaPredicted RBP16.62■□□□□ 0.25
LIG1-218ENST00000599322 MYH4Q9Y623 1939 aa16.62■□□□□ 0.25
LIG1-218ENST00000599322 FRMPD3Q5JV73 1810 aa16.61■□□□□ 0.25
LIG1-218ENST00000599322 KDM4AO75164 1064 aa16.61■□□□□ 0.25
LIG1-218ENST00000599322 TKFCQ3LXA3 575 aa16.61■□□□□ 0.25
LIG1-218ENST00000599322 TBC1D10CQ8IV04 446 aa16.61■□□□□ 0.25
LIG1-218ENST00000599322 NPLOC4Q8TAT6 608 aa16.61■□□□□ 0.25
LIG1-218ENST00000599322 TMEM47Q9BQJ4 181 aa16.61■□□□□ 0.25
LIG1-218ENST00000599322 CRISPLD2Q9H0B8 497 aa16.61■□□□□ 0.25
LIG1-218ENST00000599322 PRO3102Q9H379 93 aa16.61■□□□□ 0.25
LIG1-218ENST00000599322 KAT14Q9H8E8 782 aa16.61■□□□□ 0.25
LIG1-218ENST00000599322 DIS3Q9Y2L1 958 aaKnown RBP16.61■□□□□ 0.25
LIG1-218ENST00000599322 ERICH2A1L162 156 aa16.6■□□□□ 0.25
LIG1-218ENST00000599322 RALYLQ86SE5 291 aaKnown RBP16.6■□□□□ 0.25
LIG1-218ENST00000599322 REPS2Q8NFH8 660 aa16.6■□□□□ 0.25
LIG1-218ENST00000599322 NBPF3Q9H094 633 aa16.6■□□□□ 0.25
LIG1-218ENST00000599322 NR2E3Q9Y5X4 410 aa16.6■□□□□ 0.25
LIG1-218ENST00000599322 B4E1Z4 1266 aa16.59■□□□□ 0.25
LIG1-218ENST00000599322 CENPBP07199 599 aaPredicted RBP16.59■□□□□ 0.25
LIG1-218ENST00000599322 CYP2C19P33261 490 aa16.59■□□□□ 0.25
LIG1-218ENST00000599322 NOVP48745 357 aa16.59■□□□□ 0.25
LIG1-218ENST00000599322 SART3Q15020 963 aaKnown RBP16.59■□□□□ 0.25
LIG1-218ENST00000599322 MAML3Q96JK9 1138 aa16.59■□□□□ 0.25
LIG1-218ENST00000599322 ZSCAN10Q96SZ4 725 aaPredicted RBP16.59■□□□□ 0.25
LIG1-218ENST00000599322 ZKSCAN3Q9BRR0 538 aa16.59■□□□□ 0.25
LIG1-218ENST00000599322 ACAD9Q9H845 621 aa16.59■□□□□ 0.25
LIG1-218ENST00000599322 CNPY2Q9Y2B0 182 aa16.59■□□□□ 0.25
LIG1-218ENST00000599322 SGSM2O43147 1006 aa16.58■□□□□ 0.24
LIG1-218ENST00000599322 COBLO75128 1261 aa16.58■□□□□ 0.24
LIG1-218ENST00000599322 CCND3P30281 292 aaPredicted RBP16.58■□□□□ 0.24
LIG1-218ENST00000599322 GPATCH4Q5T3I0 446 aaKnown RBP16.58■□□□□ 0.24
LIG1-218ENST00000599322 SYDE2Q5VT97 1194 aa16.58■□□□□ 0.24
LIG1-218ENST00000599322 CCDC174Q6PII3 467 aa16.58■□□□□ 0.24
LIG1-218ENST00000599322 PAWRQ96IZ0 340 aaKnown RBP16.58■□□□□ 0.24
LIG1-218ENST00000599322 GPCPD1Q9NPB8 672 aa16.58■□□□□ 0.24
LIG1-218ENST00000599322 FLRT1Q9NZU1 646 aa16.58■□□□□ 0.24
LIG1-218ENST00000599322 DDX20Q9UHI6 824 aaKnown RBP16.58■□□□□ 0.24
LIG1-218ENST00000599322 NRBP1Q9UHY1 535 aa16.58■□□□□ 0.24
LIG1-218ENST00000599322 OGDHLQ9ULD0 1010 aa16.58■□□□□ 0.24
LIG1-218ENST00000599322 PRR12Q9ULL5 1215 aa16.58■□□□□ 0.24
LIG1-218ENST00000599322 TACC3Q9Y6A5 838 aa16.58■□□□□ 0.24
LIG1-218ENST00000599322 NEDD4P46934 1319 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms