RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 SLC35G1Q2M3R5 365 aa16.66■□□□□ 0.26
SHKBP1-217ENST00000598558 GPR142Q7Z601 462 aa16.66■□□□□ 0.26
SHKBP1-217ENST00000598558 STAG2Q8N3U4 1231 aa16.66■□□□□ 0.26
SHKBP1-217ENST00000598558 MB21D1Q8N884 522 aa16.66■□□□□ 0.26
SHKBP1-217ENST00000598558 UBA5Q9GZZ9 404 aa16.66■□□□□ 0.26
SHKBP1-217ENST00000598558 RAVER2Q9HCJ3 691 aaKnown RBP16.66■□□□□ 0.26
SHKBP1-217ENST00000598558 HPS5Q9UPZ3 1129 aa16.66■□□□□ 0.26
SHKBP1-217ENST00000598558 ZNF536O15090 1300 aa16.66■□□□□ 0.26
SHKBP1-217ENST00000598558 MYH4Q9Y623 1939 aa16.65■□□□□ 0.26
SHKBP1-217ENST00000598558 ERCC3P19447 782 aa16.65■□□□□ 0.26
SHKBP1-217ENST00000598558 STAT3P40763 770 aa16.65■□□□□ 0.26
SHKBP1-217ENST00000598558 STAT2P52630 851 aa16.65■□□□□ 0.26
SHKBP1-217ENST00000598558 TROAPQ12815 778 aa16.65■□□□□ 0.26
SHKBP1-217ENST00000598558 PKN2Q16513 984 aaKnown RBP16.65■□□□□ 0.26
SHKBP1-217ENST00000598558 MORN1Q5T089 497 aa16.65■□□□□ 0.26
SHKBP1-217ENST00000598558 PLEKHH3Q7Z736 793 aa16.65■□□□□ 0.26
SHKBP1-217ENST00000598558 FAM160B2Q86V87 743 aa16.65■□□□□ 0.26
SHKBP1-217ENST00000598558 CPXCR1Q8N123 301 aa16.65■□□□□ 0.26
SHKBP1-217ENST00000598558 CHURC1Q8WUH1 139 aa16.65■□□□□ 0.26
SHKBP1-217ENST00000598558 USP6NLQ92738 828 aa16.65■□□□□ 0.26
SHKBP1-217ENST00000598558 ABHD8Q96I13 439 aa16.65■□□□□ 0.26
SHKBP1-217ENST00000598558 EPB41L2O43491 1005 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-217ENST00000598558 ZBED4O75132 1171 aa16.64■□□□□ 0.25
SHKBP1-217ENST00000598558 GNRH1P01148 92 aa16.64■□□□□ 0.25
SHKBP1-217ENST00000598558 ZKSCAN1P17029 563 aaPredicted RBP16.64■□□□□ 0.25
SHKBP1-217ENST00000598558 MAPK4P31152 587 aa16.64■□□□□ 0.25
SHKBP1-217ENST00000598558 IKQ13123 557 aaPredicted RBP16.64■□□□□ 0.25
SHKBP1-217ENST00000598558 SYDE2Q5VT97 1194 aa16.64■□□□□ 0.25
SHKBP1-217ENST00000598558 DHX32Q7L7V1 743 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-217ENST00000598558 RIOX2Q8IUF8 465 aa16.64■□□□□ 0.25
SHKBP1-217ENST00000598558 AGBL1Q96MI9 1066 aa16.64■□□□□ 0.25
SHKBP1-217ENST00000598558 JAKMIP1Q96N16 626 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-217ENST00000598558 MYL10Q9BUA6 226 aa16.64■□□□□ 0.25
SHKBP1-217ENST00000598558 MAD2L2Q9UI95 211 aa16.64■□□□□ 0.25
SHKBP1-217ENST00000598558 A0A0G2JMZ2 1700 aa16.64■□□□□ 0.25
SHKBP1-217ENST00000598558 PALM3A6NDB9 673 aaPredicted RBP16.63■□□□□ 0.25
SHKBP1-217ENST00000598558 ATP2A1O14983 1001 aa16.63■□□□□ 0.25
SHKBP1-217ENST00000598558 PTPREP23469 700 aa16.63■□□□□ 0.25
SHKBP1-217ENST00000598558 CCNA1P78396 465 aa16.63■□□□□ 0.25
SHKBP1-217ENST00000598558 ARHGEF6Q15052 776 aa16.63■□□□□ 0.25
SHKBP1-217ENST00000598558 WDR78Q5VTH9 848 aa16.63■□□□□ 0.25
SHKBP1-217ENST00000598558 NBPF11Q86T75 865 aa16.63■□□□□ 0.25
SHKBP1-217ENST00000598558 NCAPG2Q86XI2 1143 aa16.63■□□□□ 0.25
SHKBP1-217ENST00000598558 RAB11FIP4Q86YS3 637 aa16.63■□□□□ 0.25
SHKBP1-217ENST00000598558 SHCBP1Q8NEM2 672 aa16.63■□□□□ 0.25
SHKBP1-217ENST00000598558 COA7Q96BR5 231 aa16.63■□□□□ 0.25
SHKBP1-217ENST00000598558 TMEM87BQ96K49 555 aa16.63■□□□□ 0.25
SHKBP1-217ENST00000598558 MTA3Q9BTC8 594 aa16.63■□□□□ 0.25
SHKBP1-217ENST00000598558 RANBP17Q9H2T7 1088 aaKnown RBP16.63■□□□□ 0.25
SHKBP1-217ENST00000598558 ERICH2A1L162 156 aa16.62■□□□□ 0.25
SHKBP1-217ENST00000598558 HOXD10P28358 340 aa16.62■□□□□ 0.25
SHKBP1-217ENST00000598558 SLC4A3P48751 1232 aa16.62■□□□□ 0.25
SHKBP1-217ENST00000598558 KRT32Q14532 448 aa16.62■□□□□ 0.25
SHKBP1-217ENST00000598558 GRM4Q14833 912 aa16.62■□□□□ 0.25
SHKBP1-217ENST00000598558 SNRNP48Q6IEG0 339 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-217ENST00000598558 CCDC174Q6PII3 467 aa16.62■□□□□ 0.25
SHKBP1-217ENST00000598558 SH3TC2Q8TF17 1288 aa16.62■□□□□ 0.25
SHKBP1-217ENST00000598558 BRPF3Q9ULD4 1205 aa16.62■□□□□ 0.25
SHKBP1-217ENST00000598558 PARP14Q460N5 1801 aa16.61■□□□□ 0.25
SHKBP1-217ENST00000598558 COBLO75128 1261 aa16.61■□□□□ 0.25
SHKBP1-217ENST00000598558 PARP1P09874 1014 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-217ENST00000598558 ELNP15502 786 aa16.61■□□□□ 0.25
SHKBP1-217ENST00000598558 RXRAP19793 462 aa16.61■□□□□ 0.25
SHKBP1-217ENST00000598558 CYP2B6P20813 491 aa16.61■□□□□ 0.25
SHKBP1-217ENST00000598558 LIFRP42702 1097 aa16.61■□□□□ 0.25
SHKBP1-217ENST00000598558 PRMT2P55345 433 aa16.61■□□□□ 0.25
SHKBP1-217ENST00000598558 IRF5Q13568 498 aa16.61■□□□□ 0.25
SHKBP1-217ENST00000598558 SART3Q15020 963 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-217ENST00000598558 CCL14Q16627 93 aa16.61■□□□□ 0.25
SHKBP1-217ENST00000598558 GPATCH4Q5T3I0 446 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-217ENST00000598558 ADGRF4Q8IZF3 695 aa16.61■□□□□ 0.25
SHKBP1-217ENST00000598558 ZNF654Q8IZM8 581 aa16.61■□□□□ 0.25
SHKBP1-217ENST00000598558 NPLOC4Q8TAT6 608 aa16.61■□□□□ 0.25
SHKBP1-217ENST00000598558 TEX13BQ9BXU2 312 aa16.61■□□□□ 0.25
SHKBP1-217ENST00000598558 SLC15A5A6NIM6 579 aa16.6■□□□□ 0.25
SHKBP1-217ENST00000598558 ADCY3O60266 1144 aa16.6■□□□□ 0.25
SHKBP1-217ENST00000598558 SLC25A27O95847 323 aa16.6■□□□□ 0.25
SHKBP1-217ENST00000598558 RPS6KB1P23443 525 aa16.6■□□□□ 0.25
SHKBP1-217ENST00000598558 TRIM32Q13049 653 aa16.6■□□□□ 0.25
SHKBP1-217ENST00000598558 GRB14Q14449 540 aa16.6■□□□□ 0.25
SHKBP1-217ENST00000598558 ASPRV1Q53RT3 343 aa16.6■□□□□ 0.25
SHKBP1-217ENST00000598558 SGMS1Q86VZ5 419 aa16.6■□□□□ 0.25
SHKBP1-217ENST00000598558 CCAR1Q8IX12 1150 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-217ENST00000598558 RAET1EQ8TD07 263 aa16.6■□□□□ 0.25
SHKBP1-217ENST00000598558 NUDT12Q9BQG2 462 aa16.6■□□□□ 0.25
SHKBP1-217ENST00000598558 MROH8Q9H579 483 aa16.6■□□□□ 0.25
SHKBP1-217ENST00000598558 JMJD4Q9H9V9 463 aa16.6■□□□□ 0.25
SHKBP1-217ENST00000598558 ZSWIM6Q9HCJ5 1215 aa16.6■□□□□ 0.25
SHKBP1-217ENST00000598558 VAT1LQ9HCJ6 419 aa16.6■□□□□ 0.25
SHKBP1-217ENST00000598558 FLRT1Q9NZU1 646 aa16.6■□□□□ 0.25
SHKBP1-217ENST00000598558 WDR19Q8NEZ3 1342 aa16.6■□□□□ 0.25
SHKBP1-217ENST00000598558 HTTP42858 3142 aa16.59■□□□□ 0.25
SHKBP1-217ENST00000598558 KLRF2D3W0D1 207 aa16.59■□□□□ 0.25
SHKBP1-217ENST00000598558 CYTH3O43739 400 aa16.59■□□□□ 0.25
SHKBP1-217ENST00000598558 FDX1P10109 184 aa16.59■□□□□ 0.25
SHKBP1-217ENST00000598558 CASTP20810 708 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-217ENST00000598558 ADORA2AP29274 412 aa16.59■□□□□ 0.25
SHKBP1-217ENST00000598558 GRK4P32298 578 aa16.59■□□□□ 0.25
SHKBP1-217ENST00000598558 OAZ1P54368 228 aa16.59■□□□□ 0.25
SHKBP1-217ENST00000598558 MAP2K5Q13163 448 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms