RNA–Protein interactions for RNA: ENST00000597297.1

PDE4C-210, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-210ENST00000597297 ELP3Q9H9T3 547 aa13.58□□□□□ -0.24
PDE4C-210ENST00000597297 WBP1LQ9NX94 342 aa13.58□□□□□ -0.24
PDE4C-210ENST00000597297 MAD2L2Q9UI95 211 aa13.58□□□□□ -0.24
PDE4C-210ENST00000597297 CLIC4Q9Y696 253 aa13.58□□□□□ -0.24
PDE4C-210ENST00000597297 hCG_1642624A0A1W2PR95 340 aa13.57□□□□□ -0.24
PDE4C-210ENST00000597297 FAM196BA6NMK8 535 aa13.57□□□□□ -0.24
PDE4C-210ENST00000597297 GJA5P36382 358 aa13.57□□□□□ -0.24
PDE4C-210ENST00000597297 VGLL4Q14135 290 aa13.57□□□□□ -0.24
PDE4C-210ENST00000597297 SPRYD7Q5W111 196 aa13.57□□□□□ -0.24
PDE4C-210ENST00000597297 ANO1Q5XXA6 986 aa13.57□□□□□ -0.24
PDE4C-210ENST00000597297 NOSTRINQ8IVI9 506 aa13.57□□□□□ -0.24
PDE4C-210ENST00000597297 KCNG4Q8TDN1 519 aa13.57□□□□□ -0.24
PDE4C-210ENST00000597297 CNKSR2Q8WXI2 1034 aa13.57□□□□□ -0.24
PDE4C-210ENST00000597297 SHISA4Q96DD7 197 aa13.57□□□□□ -0.24
PDE4C-210ENST00000597297 PHF20Q9BVI0 1012 aa13.57□□□□□ -0.24
PDE4C-210ENST00000597297 VPS54Q9P1Q0 977 aa13.57□□□□□ -0.24
PDE4C-210ENST00000597297 PALM3A6NDB9 673 aaPredicted RBP13.56□□□□□ -0.24
PDE4C-210ENST00000597297 BTBD18B2RXH4 712 aa13.56□□□□□ -0.24
PDE4C-210ENST00000597297 TBC1D12O60347 775 aa13.56□□□□□ -0.24
PDE4C-210ENST00000597297 HSPA1AP0DMV8 641 aaKnown RBP13.56□□□□□ -0.24
PDE4C-210ENST00000597297 HSPA1BP0DMV9 641 aaKnown RBP13.56□□□□□ -0.24
PDE4C-210ENST00000597297 XRCC6P12956 609 aaKnown RBP eCLIP13.56□□□□□ -0.24
PDE4C-210ENST00000597297 SCG2P13521 617 aa13.56□□□□□ -0.24
PDE4C-210ENST00000597297 MAP2K1Q02750 393 aaPredicted RBP13.56□□□□□ -0.24
PDE4C-210ENST00000597297 PFKFB3Q16875 520 aaPredicted RBP13.56□□□□□ -0.24
PDE4C-210ENST00000597297 STAG2Q8N3U4 1231 aa13.56□□□□□ -0.24
PDE4C-210ENST00000597297 WNK4Q96J92 1243 aa13.56□□□□□ -0.24
PDE4C-210ENST00000597297 LZTS2Q9BRK4 669 aa13.56□□□□□ -0.24
PDE4C-210ENST00000597297 MTMR4Q9NYA4 1195 aa13.56□□□□□ -0.24
PDE4C-210ENST00000597297 PI4KBQ9UBF8 816 aa13.56□□□□□ -0.24
PDE4C-210ENST00000597297 SPTLC2O15270 562 aa13.55□□□□□ -0.24
PDE4C-210ENST00000597297 ME1P48163 572 aa13.55□□□□□ -0.24
PDE4C-210ENST00000597297 SF3A1Q15459 793 aaKnown RBP13.55□□□□□ -0.24
PDE4C-210ENST00000597297 CCDC17Q96LX7 622 aa13.55□□□□□ -0.24
PDE4C-210ENST00000597297 DNAJC18Q9H819 358 aa13.55□□□□□ -0.24
PDE4C-210ENST00000597297 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.55□□□□□ -0.24
PDE4C-210ENST00000597297 DDX19AQ9NUU7 478 aaKnown RBP13.55□□□□□ -0.24
PDE4C-210ENST00000597297 PCDHA7Q9UN72 937 aa13.55□□□□□ -0.24
PDE4C-210ENST00000597297 CSADQ9Y600 493 aa13.55□□□□□ -0.24
PDE4C-210ENST00000597297 SNCAIPQ9Y6H5 919 aa13.55□□□□□ -0.24
PDE4C-210ENST00000597297 OTOFQ9HC10 1997 aa13.55□□□□□ -0.24
PDE4C-210ENST00000597297 KRT2P35908 639 aa13.54□□□□□ -0.24
PDE4C-210ENST00000597297 RRP1BQ14684 758 aaKnown RBP13.54□□□□□ -0.24
PDE4C-210ENST00000597297 SLC39A14Q15043 492 aa13.54□□□□□ -0.24
PDE4C-210ENST00000597297 FOXP4Q8IVH2 680 aaPredicted RBP13.54□□□□□ -0.24
PDE4C-210ENST00000597297 CCAR1Q8IX12 1150 aaKnown RBP13.54□□□□□ -0.24
PDE4C-210ENST00000597297 OPTNQ96CV9 577 aa13.54□□□□□ -0.24
PDE4C-210ENST00000597297 NUP62CLQ9H1M0 184 aa13.54□□□□□ -0.24
PDE4C-210ENST00000597297 TSPY26PQ9H489 355 aa13.54□□□□□ -0.24
PDE4C-210ENST00000597297 DACT1Q9NYF0 836 aa13.54□□□□□ -0.24
PDE4C-210ENST00000597297 MTMR7Q9Y216 660 aa13.54□□□□□ -0.24
PDE4C-210ENST00000597297 A0A1W2PQ27 194 aa13.54□□□□□ -0.24
PDE4C-210ENST00000597297 A0A1W2PQ64 194 aa13.54□□□□□ -0.24
PDE4C-210ENST00000597297 A0A1W2PQD8 194 aa13.54□□□□□ -0.24
PDE4C-210ENST00000597297 TTLL1O95922 423 aa13.54□□□□□ -0.24
PDE4C-210ENST00000597297 PARP1P09874 1014 aaKnown RBP13.54□□□□□ -0.24
PDE4C-210ENST00000597297 TM4SF4P48230 202 aa13.54□□□□□ -0.24
PDE4C-210ENST00000597297 NR5A1Q13285 461 aa13.54□□□□□ -0.24
PDE4C-210ENST00000597297 SLC35G1Q2M3R5 365 aa13.54□□□□□ -0.24
PDE4C-210ENST00000597297 PPP4R3BQ5MIZ7 849 aa13.54□□□□□ -0.24
PDE4C-210ENST00000597297 ADALQ6DHV7 355 aa13.54□□□□□ -0.24
PDE4C-210ENST00000597297 METTL16Q86W50 562 aaKnown RBP13.54□□□□□ -0.24
PDE4C-210ENST00000597297 OXER1Q8TDS5 423 aa13.54□□□□□ -0.24
PDE4C-210ENST00000597297 SPZ1Q9BXG8 430 aa13.54□□□□□ -0.24
PDE4C-210ENST00000597297 TRIM34Q9BYJ4 488 aa13.54□□□□□ -0.24
PDE4C-210ENST00000597297 CLSTN2Q9H4D0 955 aa13.54□□□□□ -0.24
PDE4C-210ENST00000597297 BRMS1Q9HCU9 246 aa13.54□□□□□ -0.24
PDE4C-210ENST00000597297 KLRF2D3W0D1 207 aa13.53□□□□□ -0.24
PDE4C-210ENST00000597297 MPHOSPH10O00566 681 aaKnown RBP13.53□□□□□ -0.24
PDE4C-210ENST00000597297 FOXN1O15353 648 aa13.53□□□□□ -0.24
PDE4C-210ENST00000597297 NR1I2O75469 434 aa13.53□□□□□ -0.24
PDE4C-210ENST00000597297 ZBTB48P10074 688 aaPredicted RBP13.53□□□□□ -0.24
PDE4C-210ENST00000597297 PTPAQ15257 358 aa13.53□□□□□ -0.24
PDE4C-210ENST00000597297 RILPL1Q5EBL4 403 aa13.53□□□□□ -0.24
PDE4C-210ENST00000597297 TATDN1Q6P1N9 297 aa13.53□□□□□ -0.24
PDE4C-210ENST00000597297 CCDC73Q6ZRK6 1079 aa13.53□□□□□ -0.24
PDE4C-210ENST00000597297 RASGRP2Q7LDG7 609 aa13.53□□□□□ -0.24
PDE4C-210ENST00000597297 ERO1BQ86YB8 467 aa13.53□□□□□ -0.24
PDE4C-210ENST00000597297 PIBF1Q8WXW3 757 aa13.53□□□□□ -0.24
PDE4C-210ENST00000597297 MRPS27Q92552 414 aaKnown RBP13.53□□□□□ -0.24
PDE4C-210ENST00000597297 OTUD5Q96G74 571 aa13.53□□□□□ -0.24
PDE4C-210ENST00000597297 RBSNQ9H1K0 784 aa13.53□□□□□ -0.24
PDE4C-210ENST00000597297 GOLPH3LQ9H4A5 285 aa13.53□□□□□ -0.24
PDE4C-210ENST00000597297 SH3GLB2Q9NR46 395 aa13.53□□□□□ -0.24
PDE4C-210ENST00000597297 SPDYE5A6NIY4 337 aa13.52□□□□□ -0.25
PDE4C-210ENST00000597297 USP17L5A8MUK1 530 aa13.52□□□□□ -0.25
PDE4C-210ENST00000597297 CYTH3O43739 400 aa13.52□□□□□ -0.25
PDE4C-210ENST00000597297 CTNND1O60716 968 aaKnown RBP13.52□□□□□ -0.25
PDE4C-210ENST00000597297 PPP6R2O75170 966 aa13.52□□□□□ -0.25
PDE4C-210ENST00000597297 GOLGA8HP0CJ92 632 aa13.52□□□□□ -0.25
PDE4C-210ENST00000597297 SMARCA1P28370 1054 aa13.52□□□□□ -0.25
PDE4C-210ENST00000597297 NPY5RQ15761 445 aa13.52□□□□□ -0.25
PDE4C-210ENST00000597297 CERKLQ49MI3 558 aaPredicted RBP13.52□□□□□ -0.25
PDE4C-210ENST00000597297 NOL9Q5SY16 702 aaKnown RBP13.52□□□□□ -0.25
PDE4C-210ENST00000597297 USP17L2Q6R6M4 530 aa13.52□□□□□ -0.25
PDE4C-210ENST00000597297 CLEC10AQ8IUN9 316 aa13.52□□□□□ -0.25
PDE4C-210ENST00000597297 LRRC47Q8N1G4 583 aaKnown RBP13.52□□□□□ -0.25
PDE4C-210ENST00000597297 FSIP1Q8NA03 581 aa13.52□□□□□ -0.25
PDE4C-210ENST00000597297 MS4A4AQ96JQ5 239 aa13.52□□□□□ -0.25
PDE4C-210ENST00000597297 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms