RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 VCAM1P19320 739 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 DDIT3P35638 169 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 OAZ1P54368 228 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 HUNKP57058 714 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 USP17L24Q0WX57 530 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 CCDC96Q2M329 555 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 SYDE2Q5VT97 1194 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 SPRYD7Q5W111 196 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 RGMBQ6NW40 437 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 PPP1R18Q6NYC8 613 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 LBX2Q6XYB7 198 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 PRPF38AQ8NAV1 312 aaKnown RBP10.16□□□□□ -0.78
SNRPA-202ENST00000596860 CCDC12Q8WUD4 166 aaPredicted RBP10.16□□□□□ -0.78
SNRPA-202ENST00000596860 CLMNQ96JQ2 1002 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 GLT8D2Q9H1C3 349 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 ZNF408Q9H9D4 720 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 PRDM10Q9NQV6 1147 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 HOXC10Q9NYD6 342 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 ORC3Q9UBD5 711 aaPredicted RBP10.16□□□□□ -0.78
SNRPA-202ENST00000596860 ADAMTS5Q9UNA0 930 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 FZD1Q9UP38 647 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 PNMA6FA0A0J9YX94 578 aa10.15□□□□□ -0.78
SNRPA-202ENST00000596860 MANSC4A6NHS7 340 aaPredicted RBP10.15□□□□□ -0.78
SNRPA-202ENST00000596860 TRIM75PA6NK02 468 aa10.15□□□□□ -0.78
SNRPA-202ENST00000596860 ATP2A1O14983 1001 aa10.15□□□□□ -0.78
SNRPA-202ENST00000596860 CYTH3O43739 400 aa10.15□□□□□ -0.78
SNRPA-202ENST00000596860 PLEKHA8P1O95397 391 aa10.15□□□□□ -0.78
SNRPA-202ENST00000596860 FDPSP14324 419 aaKnown RBP10.15□□□□□ -0.78
SNRPA-202ENST00000596860 RXRAP19793 462 aa10.15□□□□□ -0.78
SNRPA-202ENST00000596860 GJB2P29033 226 aa10.15□□□□□ -0.78
SNRPA-202ENST00000596860 HMGCS2P54868 508 aa10.15□□□□□ -0.78
SNRPA-202ENST00000596860 NUCB2P80303 420 aa10.15□□□□□ -0.78
SNRPA-202ENST00000596860 COG2Q14746 738 aa10.15□□□□□ -0.78
SNRPA-202ENST00000596860 PFKFB3Q16875 520 aaPredicted RBP10.15□□□□□ -0.78
SNRPA-202ENST00000596860 GALNT17Q6IS24 598 aa10.15□□□□□ -0.78
SNRPA-202ENST00000596860 CATSPERGQ6ZRH7 1159 aa10.15□□□□□ -0.78
SNRPA-202ENST00000596860 MOB2Q70IA6 237 aa10.15□□□□□ -0.78
SNRPA-202ENST00000596860 STAG2Q8N3U4 1231 aa10.15□□□□□ -0.78
SNRPA-202ENST00000596860 SAMD3Q8N6K7 520 aa10.15□□□□□ -0.78
SNRPA-202ENST00000596860 MB21D1Q8N884 522 aa10.15□□□□□ -0.78
SNRPA-202ENST00000596860 FAM184AQ8NB25 1140 aa10.15□□□□□ -0.78
SNRPA-202ENST00000596860 RRP36Q96EU6 259 aaKnown RBP10.15□□□□□ -0.78
SNRPA-202ENST00000596860 OTUD5Q96G74 571 aa10.15□□□□□ -0.78
SNRPA-202ENST00000596860 SLF1Q9BQI6 1058 aa10.15□□□□□ -0.78
SNRPA-202ENST00000596860 RANBP17Q9H2T7 1088 aaKnown RBP10.15□□□□□ -0.78
SNRPA-202ENST00000596860 SEC63Q9UGP8 760 aaKnown RBP10.15□□□□□ -0.78
SNRPA-202ENST00000596860 PNMA3Q9UL41 463 aa10.15□□□□□ -0.78
SNRPA-202ENST00000596860 PPP1R9AQ9ULJ8 1098 aa10.15□□□□□ -0.78
SNRPA-202ENST00000596860 AGTPBP1Q9UPW5 1226 aa10.15□□□□□ -0.78
SNRPA-202ENST00000596860 ESYT2A0FGR8 921 aa10.14□□□□□ -0.79
SNRPA-202ENST00000596860 RASSF10A6NK89 507 aa10.14□□□□□ -0.79
SNRPA-202ENST00000596860 TMEM232C9JQI7 657 aa10.14□□□□□ -0.79
SNRPA-202ENST00000596860 ZBTB5O15062 677 aa10.14□□□□□ -0.79
SNRPA-202ENST00000596860 SLC10A3P09131 477 aa10.14□□□□□ -0.79
SNRPA-202ENST00000596860 SCG2P13521 617 aa10.14□□□□□ -0.79
SNRPA-202ENST00000596860 FMR1Q06787 632 aaKnown RBP eCLIP10.14□□□□□ -0.79
SNRPA-202ENST00000596860 MOGSQ13724 837 aa10.14□□□□□ -0.79
SNRPA-202ENST00000596860 PKN1Q16512 942 aa10.14□□□□□ -0.79
SNRPA-202ENST00000596860 KIAA1755Q5JYT7 1200 aa10.14□□□□□ -0.79
SNRPA-202ENST00000596860 FAM83BQ5T0W9 1011 aa10.14□□□□□ -0.79
SNRPA-202ENST00000596860 KCTD1Q719H9 257 aa10.14□□□□□ -0.79
SNRPA-202ENST00000596860 ANKRD23Q86SG2 305 aa10.14□□□□□ -0.79
SNRPA-202ENST00000596860 RASAL3Q86YV0 1011 aa10.14□□□□□ -0.79
SNRPA-202ENST00000596860 CCDC144CPQ8IYA2 1237 aa10.14□□□□□ -0.79
SNRPA-202ENST00000596860 ADGRF4Q8IZF3 695 aa10.14□□□□□ -0.79
SNRPA-202ENST00000596860 CCDC148Q8NFR7 591 aa10.14□□□□□ -0.79
SNRPA-202ENST00000596860 MS4A4AQ96JQ5 239 aa10.14□□□□□ -0.79
SNRPA-202ENST00000596860 SLC26A6Q9BXS9 759 aa10.14□□□□□ -0.79
SNRPA-202ENST00000596860 RPAP3Q9H6T3 665 aaPredicted RBP10.14□□□□□ -0.79
SNRPA-202ENST00000596860 JMJD4Q9H9V9 463 aa10.14□□□□□ -0.79
SNRPA-202ENST00000596860 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.14□□□□□ -0.79
SNRPA-202ENST00000596860 PRR12Q9ULL5 1215 aa10.14□□□□□ -0.79
SNRPA-202ENST00000596860 FRMPD2Q68DX3 1309 aaPredicted RBP10.13□□□□□ -0.79
SNRPA-202ENST00000596860 JAK2O60674 1132 aa10.13□□□□□ -0.79
SNRPA-202ENST00000596860 GOLGA8HP0CJ92 632 aa10.13□□□□□ -0.79
SNRPA-202ENST00000596860 OSBPP22059 807 aa10.13□□□□□ -0.79
SNRPA-202ENST00000596860 CALML3P27482 149 aa10.13□□□□□ -0.79
SNRPA-202ENST00000596860 DSG3P32926 999 aa10.13□□□□□ -0.79
SNRPA-202ENST00000596860 COPB2P35606 906 aa10.13□□□□□ -0.79
SNRPA-202ENST00000596860 GJA5P36382 358 aa10.13□□□□□ -0.79
SNRPA-202ENST00000596860 SLC35G1Q2M3R5 365 aa10.13□□□□□ -0.79
SNRPA-202ENST00000596860 LARP1BQ659C4 914 aaKnown RBP10.13□□□□□ -0.79
SNRPA-202ENST00000596860 MCTP2Q6DN12 878 aa10.13□□□□□ -0.79
SNRPA-202ENST00000596860 CCDC84Q86UT8 332 aaPredicted RBP10.13□□□□□ -0.79
SNRPA-202ENST00000596860 RAB11FIP4Q86YS3 637 aa10.13□□□□□ -0.79
SNRPA-202ENST00000596860 FBXO18Q8NFZ0 1043 aa10.13□□□□□ -0.79
SNRPA-202ENST00000596860 PHKBQ93100 1093 aa10.13□□□□□ -0.79
SNRPA-202ENST00000596860 AMNQ9BXJ7 453 aa10.13□□□□□ -0.79
SNRPA-202ENST00000596860 SLC38A10Q9HBR0 1119 aa10.13□□□□□ -0.79
SNRPA-202ENST00000596860 GPCPD1Q9NPB8 672 aa10.13□□□□□ -0.79
SNRPA-202ENST00000596860 BARHL2Q9NY43 387 aa10.13□□□□□ -0.79
SNRPA-202ENST00000596860 V9GY48 417 aaPredicted RBP10.13□□□□□ -0.79
SNRPA-202ENST00000596860 COL11A1P12107 1806 aaPredicted RBP10.12□□□□□ -0.79
SNRPA-202ENST00000596860 WDR33Q9C0J8 1336 aaKnown RBP10.12□□□□□ -0.79
SNRPA-202ENST00000596860 RBBP6Q7Z6E9 1792 aaKnown RBP10.12□□□□□ -0.79
SNRPA-202ENST00000596860 STX6O43752 255 aa10.12□□□□□ -0.79
SNRPA-202ENST00000596860 FLOT1O75955 427 aa10.12□□□□□ -0.79
SNRPA-202ENST00000596860 SYT1P21579 422 aa10.12□□□□□ -0.79
SNRPA-202ENST00000596860 GNA11P29992 359 aa10.12□□□□□ -0.79
SNRPA-202ENST00000596860 CTCFP49711 727 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms