RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 FOXP2O15409 715 aa18.99■□□□□ 0.63
USHBP1-205ENST00000595993 ADCYAP1R1P41586 468 aa18.99■□□□□ 0.63
USHBP1-205ENST00000595993 SHHQ15465 462 aa18.99■□□□□ 0.63
USHBP1-205ENST00000595993 ZNF792Q3KQV3 632 aa18.99■□□□□ 0.63
USHBP1-205ENST00000595993 CCDC136Q96JN2 1154 aa18.99■□□□□ 0.63
USHBP1-205ENST00000595993 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.99■□□□□ 0.63
USHBP1-205ENST00000595993 FBXO28Q9NVF7 368 aa18.99■□□□□ 0.63
USHBP1-205ENST00000595993 PPP1R9AQ9ULJ8 1098 aa18.99■□□□□ 0.63
USHBP1-205ENST00000595993 SMCHD1A6NHR9 2005 aa18.99■□□□□ 0.63
USHBP1-205ENST00000595993 TRIM43BA6NCK2 446 aa18.98■□□□□ 0.63
USHBP1-205ENST00000595993 VWA5AO00534 786 aa18.98■□□□□ 0.63
USHBP1-205ENST00000595993 SDSP20132 328 aa18.98■□□□□ 0.63
USHBP1-205ENST00000595993 NMIQ13287 307 aaPredicted RBP18.98■□□□□ 0.63
USHBP1-205ENST00000595993 C9orf50Q5SZB4 431 aa18.98■□□□□ 0.63
USHBP1-205ENST00000595993 CTR9Q6PD62 1173 aa18.98■□□□□ 0.63
USHBP1-205ENST00000595993 TRIM43Q96BQ3 446 aaPredicted RBP18.98■□□□□ 0.63
USHBP1-205ENST00000595993 TINF2Q9BSI4 451 aa18.98■□□□□ 0.63
USHBP1-205ENST00000595993 ZNF865P0CJ78 1059 aaPredicted RBP18.97■□□□□ 0.63
USHBP1-205ENST00000595993 SH3RF1Q7Z6J0 888 aa18.97■□□□□ 0.63
USHBP1-205ENST00000595993 TICAM2Q86XR7 235 aa18.97■□□□□ 0.63
USHBP1-205ENST00000595993 AMOTL1Q8IY63 956 aa18.97■□□□□ 0.63
USHBP1-205ENST00000595993 BADQ92934 168 aa18.97■□□□□ 0.63
USHBP1-205ENST00000595993 MMP19Q99542 508 aa18.97■□□□□ 0.63
USHBP1-205ENST00000595993 XPNPEP3Q9NQH7 507 aa18.97■□□□□ 0.63
USHBP1-205ENST00000595993 HELLSQ9NRZ9 838 aa18.97■□□□□ 0.63
USHBP1-205ENST00000595993 PGK2P07205 417 aa18.96■□□□□ 0.63
USHBP1-205ENST00000595993 GNAT2P19087 354 aa18.96■□□□□ 0.63
USHBP1-205ENST00000595993 COPB2P35606 906 aa18.96■□□□□ 0.63
USHBP1-205ENST00000595993 STAT3P40763 770 aa18.96■□□□□ 0.63
USHBP1-205ENST00000595993 SMAD3P84022 425 aaKnown RBP18.96■□□□□ 0.63
USHBP1-205ENST00000595993 TLE2Q04725 743 aa18.96■□□□□ 0.63
USHBP1-205ENST00000595993 SBK1Q52WX2 424 aa18.96■□□□□ 0.63
USHBP1-205ENST00000595993 ZNF697Q5TEC3 545 aa18.96■□□□□ 0.63
USHBP1-205ENST00000595993 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.96■□□□□ 0.63
USHBP1-205ENST00000595993 GOPCQ9HD26 462 aa18.96■□□□□ 0.63
USHBP1-205ENST00000595993 ARPP21Q9UBL0 812 aaPredicted RBP18.96■□□□□ 0.63
USHBP1-205ENST00000595993 ADAMTS4O75173 837 aa18.95■□□□□ 0.62
USHBP1-205ENST00000595993 RARBP10826 455 aa18.95■□□□□ 0.62
USHBP1-205ENST00000595993 TAL1P17542 331 aaPredicted RBP18.95■□□□□ 0.62
USHBP1-205ENST00000595993 KCTD2Q14681 263 aa18.95■□□□□ 0.62
USHBP1-205ENST00000595993 VPS53Q5VIR6 699 aa18.95■□□□□ 0.62
USHBP1-205ENST00000595993 GIMAP6Q6P9H5 292 aa18.95■□□□□ 0.62
USHBP1-205ENST00000595993 ZNF589Q86UQ0 364 aaPredicted RBP18.95■□□□□ 0.62
USHBP1-205ENST00000595993 IFNL3Q8IZI9 196 aa18.95■□□□□ 0.62
USHBP1-205ENST00000595993 MSL3Q8N5Y2 521 aaKnown RBP18.95■□□□□ 0.62
USHBP1-205ENST00000595993 FERMT2Q96AC1 680 aa18.95■□□□□ 0.62
USHBP1-205ENST00000595993 DDRGK1Q96HY6 314 aa18.95■□□□□ 0.62
USHBP1-205ENST00000595993 PRDM5Q9NQX1 630 aaPredicted RBP18.95■□□□□ 0.62
USHBP1-205ENST00000595993 PATL2C9JE40 543 aaKnown RBP18.94■□□□□ 0.62
USHBP1-205ENST00000595993 KIAA0355O15063 1070 aa18.94■□□□□ 0.62
USHBP1-205ENST00000595993 ITGB8P26012 769 aa18.94■□□□□ 0.62
USHBP1-205ENST00000595993 MCMDC2Q4G0Z9 681 aa18.94■□□□□ 0.62
USHBP1-205ENST00000595993 FAM83BQ5T0W9 1011 aa18.94■□□□□ 0.62
USHBP1-205ENST00000595993 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.94■□□□□ 0.62
USHBP1-205ENST00000595993 RNF180Q86T96 592 aa18.94■□□□□ 0.62
USHBP1-205ENST00000595993 COL25A1Q9BXS0 654 aaPredicted RBP18.94■□□□□ 0.62
USHBP1-205ENST00000595993 TACC3Q9Y6A5 838 aa18.94■□□□□ 0.62
USHBP1-205ENST00000595993 DNAJC25-GNG10A0A024R161 153 aa18.93■□□□□ 0.62
USHBP1-205ENST00000595993 A0A1W2PQ45 241 aaPredicted RBP18.93■□□□□ 0.62
USHBP1-205ENST00000595993 A0A1W2PQY0 241 aa18.93■□□□□ 0.62
USHBP1-205ENST00000595993 ATP2A1O14983 1001 aa18.93■□□□□ 0.62
USHBP1-205ENST00000595993 PGK1P00558 417 aa18.93■□□□□ 0.62
USHBP1-205ENST00000595993 APPP05067 770 aa18.93■□□□□ 0.62
USHBP1-205ENST00000595993 AKR1A1P14550 325 aa18.93■□□□□ 0.62
USHBP1-205ENST00000595993 RASA1P20936 1047 aa18.93■□□□□ 0.62
USHBP1-205ENST00000595993 TDO2P48775 406 aa18.93■□□□□ 0.62
USHBP1-205ENST00000595993 MAMDC4Q6UXC1 1216 aa18.93■□□□□ 0.62
USHBP1-205ENST00000595993 FAM161BQ96MY7 647 aa18.93■□□□□ 0.62
USHBP1-205ENST00000595993 CDX2Q99626 313 aaPredicted RBP18.93■□□□□ 0.62
USHBP1-205ENST00000595993 TSEN34Q9BSV6 310 aaKnown RBP18.93■□□□□ 0.62
USHBP1-205ENST00000595993 SEMA6BQ9H3T3 888 aa18.93■□□□□ 0.62
USHBP1-205ENST00000595993 NYAP2Q9P242 653 aa18.93■□□□□ 0.62
USHBP1-205ENST00000595993 IGKV6D-41A0A0C4DH26 115 aa18.92■□□□□ 0.62
USHBP1-205ENST00000595993 MYCNP04198 464 aaPredicted RBP18.92■□□□□ 0.62
USHBP1-205ENST00000595993 CLTBP09497 229 aa18.92■□□□□ 0.62
USHBP1-205ENST00000595993 SAMD1Q6SPF0 538 aaPredicted RBP18.92■□□□□ 0.62
USHBP1-205ENST00000595993 ANKRD33Q7Z3H0 272 aa18.92■□□□□ 0.62
USHBP1-205ENST00000595993 TEX13BQ9BXU2 312 aa18.92■□□□□ 0.62
USHBP1-205ENST00000595993 IL25Q9H293 177 aa18.92■□□□□ 0.62
USHBP1-205ENST00000595993 TTYH1Q9H313 450 aaPredicted RBP18.92■□□□□ 0.62
USHBP1-205ENST00000595993 DIAPH3Q9NSV4 1193 aa18.92■□□□□ 0.62
USHBP1-205ENST00000595993 CCDC171Q6TFL3 1326 aa18.92■□□□□ 0.62
USHBP1-205ENST00000595993 SYNGAP1Q96PV0 1343 aa18.92■□□□□ 0.62
USHBP1-205ENST00000595993 MINDY4BA8MYZ0 360 aa18.91■□□□□ 0.62
USHBP1-205ENST00000595993 EPHB4P54760 987 aa18.91■□□□□ 0.62
USHBP1-205ENST00000595993 CCSAPQ6IQ19 270 aaPredicted RBP18.91■□□□□ 0.62
USHBP1-205ENST00000595993 CWC27Q6UX04 472 aaKnown RBP18.91■□□□□ 0.62
USHBP1-205ENST00000595993 ZNF467Q7Z7K2 595 aaPredicted RBP18.91■□□□□ 0.62
USHBP1-205ENST00000595993 KLHDC9Q8NEP7 349 aa18.91■□□□□ 0.62
USHBP1-205ENST00000595993 TOX2Q96NM4 488 aa18.91■□□□□ 0.62
USHBP1-205ENST00000595993 SLF1Q9BQI6 1058 aa18.91■□□□□ 0.62
USHBP1-205ENST00000595993 RIPK3Q9Y572 518 aa18.91■□□□□ 0.62
USHBP1-205ENST00000595993 CHD9Q3L8U1 2897 aa18.91■□□□□ 0.62
USHBP1-205ENST00000595993 MYH4Q9Y623 1939 aa18.9■□□□□ 0.62
USHBP1-205ENST00000595993 TMEM265A0A087WTH1 108 aa18.9■□□□□ 0.62
USHBP1-205ENST00000595993 F5H6K3 240 aa18.9■□□□□ 0.62
USHBP1-205ENST00000595993 SNAI1O95863 264 aaPredicted RBP18.9■□□□□ 0.62
USHBP1-205ENST00000595993 NDUFB10O96000 172 aa18.9■□□□□ 0.62
USHBP1-205ENST00000595993 KLRC3Q07444 240 aa18.9■□□□□ 0.62
USHBP1-205ENST00000595993 ERICH6BQ5W0A0 696 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms