RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 MCCP23508 829 aa20.46■□□□□ 0.87
IRF3-208ENST00000594387 CACNB2Q08289 660 aaPredicted RBP20.46■□□□□ 0.87
IRF3-208ENST00000594387 TRIM32Q13049 653 aa20.46■□□□□ 0.87
IRF3-208ENST00000594387 CCL14Q16627 93 aa20.46■□□□□ 0.87
IRF3-208ENST00000594387 SNRNP48Q6IEG0 339 aaKnown RBP20.46■□□□□ 0.87
IRF3-208ENST00000594387 RCSD1Q6JBY9 416 aa20.46■□□□□ 0.87
IRF3-208ENST00000594387 CENPQQ7L2Z9 268 aaPredicted RBP20.46■□□□□ 0.87
IRF3-208ENST00000594387 CPXCR1Q8N123 301 aa20.46■□□□□ 0.87
IRF3-208ENST00000594387 GMCL1Q96IK5 515 aa20.46■□□□□ 0.87
IRF3-208ENST00000594387 TTC14Q96N46 770 aa20.46■□□□□ 0.87
IRF3-208ENST00000594387 MTMR7Q9Y216 660 aa20.46■□□□□ 0.87
IRF3-208ENST00000594387 NMT2O60551 498 aa20.45■□□□□ 0.86
IRF3-208ENST00000594387 TOP1P11387 765 aaKnown RBP20.45■□□□□ 0.86
IRF3-208ENST00000594387 IQCA1Q86XH1 822 aa20.45■□□□□ 0.86
IRF3-208ENST00000594387 SHISA4Q96DD7 197 aa20.45■□□□□ 0.86
IRF3-208ENST00000594387 NEFLP07196 543 aa20.44■□□□□ 0.86
IRF3-208ENST00000594387 CNGA1P29973 690 aa20.44■□□□□ 0.86
IRF3-208ENST00000594387 CCDC96Q2M329 555 aa20.44■□□□□ 0.86
IRF3-208ENST00000594387 MAP3K21Q5TCX8 1036 aa20.44■□□□□ 0.86
IRF3-208ENST00000594387 PRPF38BQ5VTL8 546 aaKnown RBP20.44■□□□□ 0.86
IRF3-208ENST00000594387 ANKLE1Q8NAG6 615 aa20.44■□□□□ 0.86
IRF3-208ENST00000594387 NPLOC4Q8TAT6 608 aa20.44■□□□□ 0.86
IRF3-208ENST00000594387 DCAF4Q8WV16 495 aa20.44■□□□□ 0.86
IRF3-208ENST00000594387 DPF3Q92784 378 aa20.44■□□□□ 0.86
IRF3-208ENST00000594387 CHMP4CQ96CF2 233 aa20.44■□□□□ 0.86
IRF3-208ENST00000594387 DDX11Q96FC9 970 aa20.44■□□□□ 0.86
IRF3-208ENST00000594387 KRT23Q9C075 422 aa20.44■□□□□ 0.86
IRF3-208ENST00000594387 ZNF214Q9UL59 606 aaPredicted RBP20.44■□□□□ 0.86
IRF3-208ENST00000594387 CHMLP26374 656 aa20.43■□□□□ 0.86
IRF3-208ENST00000594387 OAZ1P54368 228 aa20.43■□□□□ 0.86
IRF3-208ENST00000594387 OLFML2BQ68BL8 750 aa20.43■□□□□ 0.86
IRF3-208ENST00000594387 CRISPLD2Q9H0B8 497 aa20.43■□□□□ 0.86
IRF3-208ENST00000594387 CNNM2Q9H8M5 875 aa20.43■□□□□ 0.86
IRF3-208ENST00000594387 FBXO40Q9UH90 709 aa20.43■□□□□ 0.86
IRF3-208ENST00000594387 FRMPD3Q5JV73 1810 aa20.42■□□□□ 0.86
IRF3-208ENST00000594387 ATP2A1O14983 1001 aa20.42■□□□□ 0.86
IRF3-208ENST00000594387 MSCO60682 206 aa20.42■□□□□ 0.86
IRF3-208ENST00000594387 TRDNQ13061 729 aa20.42■□□□□ 0.86
IRF3-208ENST00000594387 KCTD1Q719H9 257 aa20.42■□□□□ 0.86
IRF3-208ENST00000594387 TBC1D10CQ8IV04 446 aa20.42■□□□□ 0.86
IRF3-208ENST00000594387 REPS2Q8NFH8 660 aa20.42■□□□□ 0.86
IRF3-208ENST00000594387 TMEM47Q9BQJ4 181 aa20.42■□□□□ 0.86
IRF3-208ENST00000594387 SLC38A10Q9HBR0 1119 aa20.42■□□□□ 0.86
IRF3-208ENST00000594387 RAVER2Q9HCJ3 691 aaKnown RBP20.42■□□□□ 0.86
IRF3-208ENST00000594387 TACC3Q9Y6A5 838 aa20.42■□□□□ 0.86
IRF3-208ENST00000594387 PLA2G6O60733 806 aa20.41■□□□□ 0.86
IRF3-208ENST00000594387 COBLO75128 1261 aa20.41■□□□□ 0.86
IRF3-208ENST00000594387 KDM4AO75164 1064 aa20.41■□□□□ 0.86
IRF3-208ENST00000594387 KIAA1211Q6ZU35 1233 aa20.41■□□□□ 0.86
IRF3-208ENST00000594387 NECAB2Q7Z6G3 386 aa20.41■□□□□ 0.86
IRF3-208ENST00000594387 FLRT1Q9NZU1 646 aa20.41■□□□□ 0.86
IRF3-208ENST00000594387 DIS3Q9Y2L1 958 aaKnown RBP20.41■□□□□ 0.86
IRF3-208ENST00000594387 MYH6P13533 1939 aa20.41■□□□□ 0.86
IRF3-208ENST00000594387 CCND3P30281 292 aaPredicted RBP20.4■□□□□ 0.86
IRF3-208ENST00000594387 CYP2C19P33261 490 aa20.4■□□□□ 0.86
IRF3-208ENST00000594387 NOVP48745 357 aa20.4■□□□□ 0.86
IRF3-208ENST00000594387 DGKHQ86XP1 1220 aa20.4■□□□□ 0.86
IRF3-208ENST00000594387 ANKRD35Q8N283 1001 aa20.4■□□□□ 0.86
IRF3-208ENST00000594387 CHST13Q8NET6 341 aa20.4■□□□□ 0.86
IRF3-208ENST00000594387 CCDC136Q96JN2 1154 aa20.4■□□□□ 0.86
IRF3-208ENST00000594387 NBPF3Q9H094 633 aa20.4■□□□□ 0.86
IRF3-208ENST00000594387 U3KPZ7 1027 aaPredicted RBP20.4■□□□□ 0.86
IRF3-208ENST00000594387 NEDD4P46934 1319 aa20.39■□□□□ 0.85
IRF3-208ENST00000594387 MAML3Q96JK9 1138 aa20.39■□□□□ 0.85
IRF3-208ENST00000594387 ZKSCAN3Q9BRR0 538 aa20.39■□□□□ 0.85
IRF3-208ENST00000594387 UBAC1Q9BSL1 405 aa20.39■□□□□ 0.85
IRF3-208ENST00000594387 KAT14Q9H8E8 782 aa20.39■□□□□ 0.85
IRF3-208ENST00000594387 NR2E3Q9Y5X4 410 aa20.39■□□□□ 0.85
IRF3-208ENST00000594387 SMCHD1A6NHR9 2005 aa20.39■□□□□ 0.85
IRF3-208ENST00000594387 B4E1Z4 1266 aa20.38■□□□□ 0.85
IRF3-208ENST00000594387 PGK2P07205 417 aa20.38■□□□□ 0.85
IRF3-208ENST00000594387 TKFCQ3LXA3 575 aa20.38■□□□□ 0.85
IRF3-208ENST00000594387 PAWRQ96IZ0 340 aaKnown RBP20.38■□□□□ 0.85
IRF3-208ENST00000594387 GPCPD1Q9NPB8 672 aa20.38■□□□□ 0.85
IRF3-208ENST00000594387 OGDHLQ9ULD0 1010 aa20.38■□□□□ 0.85
IRF3-208ENST00000594387 PRR12Q9ULL5 1215 aa20.38■□□□□ 0.85
IRF3-208ENST00000594387 HTTP42858 3142 aa20.38■□□□□ 0.85
IRF3-208ENST00000594387 CCDC174Q6PII3 467 aa20.37■□□□□ 0.85
IRF3-208ENST00000594387 ZSCAN10Q96SZ4 725 aaPredicted RBP20.37■□□□□ 0.85
IRF3-208ENST00000594387 ACAD9Q9H845 621 aa20.37■□□□□ 0.85
IRF3-208ENST00000594387 DDX20Q9UHI6 824 aaKnown RBP20.37■□□□□ 0.85
IRF3-208ENST00000594387 PNMA2Q9UL42 364 aa20.37■□□□□ 0.85
IRF3-208ENST00000594387 RIPK3Q9Y572 518 aa20.37■□□□□ 0.85
IRF3-208ENST00000594387 SGSM2O43147 1006 aa20.36■□□□□ 0.85
IRF3-208ENST00000594387 CASC1Q6TDU7 716 aa20.36■□□□□ 0.85
IRF3-208ENST00000594387 RALYLQ86SE5 291 aaKnown RBP20.36■□□□□ 0.85
IRF3-208ENST00000594387 TINF2Q9BSI4 451 aa20.36■□□□□ 0.85
IRF3-208ENST00000594387 C11orf49Q9H6J7 331 aa20.36■□□□□ 0.85
IRF3-208ENST00000594387 HOMER2Q9NSB8 354 aa20.36■□□□□ 0.85
IRF3-208ENST00000594387 ZSWIM5Q9P217 1185 aa20.36■□□□□ 0.85
IRF3-208ENST00000594387 NRBP1Q9UHY1 535 aa20.36■□□□□ 0.85
IRF3-208ENST00000594387 CNPY2Q9Y2B0 182 aa20.36■□□□□ 0.85
IRF3-208ENST00000594387 FRMPD2Q68DX3 1309 aaPredicted RBP20.35■□□□□ 0.85
IRF3-208ENST00000594387 ERICH2A1L162 156 aa20.35■□□□□ 0.85
IRF3-208ENST00000594387 EVI5O60447 810 aa20.35■□□□□ 0.85
IRF3-208ENST00000594387 ALAS1P13196 640 aa20.35■□□□□ 0.85
IRF3-208ENST00000594387 CYBAP13498 195 aa20.35■□□□□ 0.85
IRF3-208ENST00000594387 ZNF792Q3KQV3 632 aa20.35■□□□□ 0.85
IRF3-208ENST00000594387 GPATCH4Q5T3I0 446 aaKnown RBP20.35■□□□□ 0.85
IRF3-208ENST00000594387 SYDE2Q5VT97 1194 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms