RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-221ENST00000593639 DCP1AQ9NPI6 582 aaPredicted RBP11.15□□□□□ -0.62
SRRM1-221ENST00000593639 MSRAQ9UJ68 235 aa11.15□□□□□ -0.62
SRRM1-221ENST00000593639 FAM184BQ9ULE4 1060 aa11.15□□□□□ -0.62
SRRM1-221ENST00000593639 NOP58Q9Y2X3 529 aaKnown RBP11.15□□□□□ -0.62
SRRM1-221ENST00000593639 PIEZO1Q92508 2521 aa11.14□□□□□ -0.63
SRRM1-221ENST00000593639 MROH7Q68CQ1 1323 aa11.14□□□□□ -0.63
SRRM1-221ENST00000593639 SYNGAP1Q96PV0 1343 aa11.14□□□□□ -0.63
SRRM1-221ENST00000593639 ARVCFO00192 962 aa11.14□□□□□ -0.63
SRRM1-221ENST00000593639 APBB1O00213 710 aa11.14□□□□□ -0.63
SRRM1-221ENST00000593639 DUSP11O75319 330 aaKnown RBP11.14□□□□□ -0.63
SRRM1-221ENST00000593639 ASGR1P07306 291 aa11.14□□□□□ -0.63
SRRM1-221ENST00000593639 CST5P28325 142 aaPredicted RBP11.14□□□□□ -0.63
SRRM1-221ENST00000593639 CYP2C18P33260 490 aa11.14□□□□□ -0.63
SRRM1-221ENST00000593639 LCORLQ8N3X6 602 aa11.14□□□□□ -0.63
SRRM1-221ENST00000593639 TMEM57Q8N5G2 664 aa11.14□□□□□ -0.63
SRRM1-221ENST00000593639 MSL3Q8N5Y2 521 aaKnown RBP11.14□□□□□ -0.63
SRRM1-221ENST00000593639 C1QTNF1Q9BXJ1 281 aa11.14□□□□□ -0.63
SRRM1-221ENST00000593639 SH2D4AQ9H788 454 aa11.14□□□□□ -0.63
SRRM1-221ENST00000593639 SLC28A3Q9HAS3 691 aa11.14□□□□□ -0.63
SRRM1-221ENST00000593639 IL23AQ9NPF7 189 aa11.14□□□□□ -0.63
SRRM1-221ENST00000593639 SWAP70Q9UH65 585 aa11.14□□□□□ -0.63
SRRM1-221ENST00000593639 PPP1R9AQ9ULJ8 1098 aa11.14□□□□□ -0.63
SRRM1-221ENST00000593639 DNAJC25-GNG10A0A024R161 153 aa11.13□□□□□ -0.63
SRRM1-221ENST00000593639 A0A0U1RQG5 324 aaPredicted RBP11.13□□□□□ -0.63
SRRM1-221ENST00000593639 IPO8O15397 1037 aaKnown RBP11.13□□□□□ -0.63
SRRM1-221ENST00000593639 C6orf222P0C671 652 aaPredicted RBP11.13□□□□□ -0.63
SRRM1-221ENST00000593639 EEF2P13639 858 aaKnown RBP11.13□□□□□ -0.63
SRRM1-221ENST00000593639 PDE6AP16499 860 aa11.13□□□□□ -0.63
SRRM1-221ENST00000593639 KCNQ1P51787 676 aa11.13□□□□□ -0.63
SRRM1-221ENST00000593639 RABGGTBP53611 331 aa11.13□□□□□ -0.63
SRRM1-221ENST00000593639 ACVR2BQ13705 512 aa11.13□□□□□ -0.63
SRRM1-221ENST00000593639 SLC9C2Q5TAH2 1124 aa11.13□□□□□ -0.63
SRRM1-221ENST00000593639 MAMDC4Q6UXC1 1216 aa11.13□□□□□ -0.63
SRRM1-221ENST00000593639 MICALL1Q8N3F8 863 aa11.13□□□□□ -0.63
SRRM1-221ENST00000593639 FRAT1Q92837 279 aaPredicted RBP11.13□□□□□ -0.63
SRRM1-221ENST00000593639 VTI1AQ96AJ9 217 aa11.13□□□□□ -0.63
SRRM1-221ENST00000593639 EPHX3Q9H6B9 360 aa11.13□□□□□ -0.63
SRRM1-221ENST00000593639 RIPK3Q9Y572 518 aa11.13□□□□□ -0.63
SRRM1-221ENST00000593639 UMODL1Q5DID0 1318 aa11.12□□□□□ -0.63
SRRM1-221ENST00000593639 ZNF532Q9HCE3 1301 aa11.12□□□□□ -0.63
SRRM1-221ENST00000593639 CYP2D7A0A087X1C5 515 aa11.12□□□□□ -0.63
SRRM1-221ENST00000593639 TCRBV5S4A2TA0A5A2 114 aa11.12□□□□□ -0.63
SRRM1-221ENST00000593639 CTAGE5O15320 804 aa11.12□□□□□ -0.63
SRRM1-221ENST00000593639 PRKAB2O43741 272 aa11.12□□□□□ -0.63
SRRM1-221ENST00000593639 CD4P01730 458 aa11.12□□□□□ -0.63
SRRM1-221ENST00000593639 FGBP02675 491 aa11.12□□□□□ -0.63
SRRM1-221ENST00000593639 MYOGP15173 224 aa11.12□□□□□ -0.63
SRRM1-221ENST00000593639 COPB2P35606 906 aa11.12□□□□□ -0.63
SRRM1-221ENST00000593639 GJA9P57773 515 aa11.12□□□□□ -0.63
SRRM1-221ENST00000593639 GNASQ5JWF2 1037 aa11.12□□□□□ -0.63
SRRM1-221ENST00000593639 FAM83BQ5T0W9 1011 aa11.12□□□□□ -0.63
SRRM1-221ENST00000593639 OTOP2Q7RTS6 562 aa11.12□□□□□ -0.63
SRRM1-221ENST00000593639 PCSK9Q8NBP7 692 aaKnown RBP11.12□□□□□ -0.63
SRRM1-221ENST00000593639 FGD4Q96M96 766 aa11.12□□□□□ -0.63
SRRM1-221ENST00000593639 LRFN3Q9BTN0 628 aa11.12□□□□□ -0.63
SRRM1-221ENST00000593639 UPF3AQ9H1J1 476 aaKnown RBP11.12□□□□□ -0.63
SRRM1-221ENST00000593639 TSPYL2Q9H2G4 693 aaPredicted RBP11.12□□□□□ -0.63
SRRM1-221ENST00000593639 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.12□□□□□ -0.63
SRRM1-221ENST00000593639 CDK8P49336 464 aa11.11□□□□□ -0.63
SRRM1-221ENST00000593639 CCDC144BQ3MJ40 725 aa11.11□□□□□ -0.63
SRRM1-221ENST00000593639 SLFNL1Q499Z3 407 aa11.11□□□□□ -0.63
SRRM1-221ENST00000593639 PPP2R2DQ66LE6 453 aa11.11□□□□□ -0.63
SRRM1-221ENST00000593639 SNRNP48Q6IEG0 339 aaKnown RBP11.11□□□□□ -0.63
SRRM1-221ENST00000593639 ZNF467Q7Z7K2 595 aaPredicted RBP11.11□□□□□ -0.63
SRRM1-221ENST00000593639 AACSQ86V21 672 aa11.11□□□□□ -0.63
SRRM1-221ENST00000593639 VWCEQ96DN2 955 aa11.11□□□□□ -0.63
SRRM1-221ENST00000593639 DDX11Q96FC9 970 aa11.11□□□□□ -0.63
SRRM1-221ENST00000593639 CCDC17Q96LX7 622 aa11.11□□□□□ -0.63
SRRM1-221ENST00000593639 NUP88Q99567 741 aaPredicted RBP11.11□□□□□ -0.63
SRRM1-221ENST00000593639 TEX13BQ9BXU2 312 aa11.11□□□□□ -0.63
SRRM1-221ENST00000593639 HIPK3Q9H422 1215 aa11.11□□□□□ -0.63
SRRM1-221ENST00000593639 ARMT1Q9H993 441 aa11.11□□□□□ -0.63
SRRM1-221ENST00000593639 SPC25Q9HBM1 224 aa11.11□□□□□ -0.63
SRRM1-221ENST00000593639 MYH1P12882 1939 aa11.11□□□□□ -0.63
SRRM1-221ENST00000593639 SMCHD1A6NHR9 2005 aa11.11□□□□□ -0.63
SRRM1-221ENST00000593639 MYO9BQ13459 2157 aa11.1□□□□□ -0.63
SRRM1-221ENST00000593639 ERC2O15083 957 aa11.1□□□□□ -0.63
SRRM1-221ENST00000593639 TLR3O15455 904 aaKnown RBP11.1□□□□□ -0.63
SRRM1-221ENST00000593639 RAD21O60216 631 aa11.1□□□□□ -0.63
SRRM1-221ENST00000593639 CCL23P55773 120 aa11.1□□□□□ -0.63
SRRM1-221ENST00000593639 NKX3-2P78367 333 aa11.1□□□□□ -0.63
SRRM1-221ENST00000593639 BEX3Q00994 111 aa11.1□□□□□ -0.63
SRRM1-221ENST00000593639 TTF1Q15361 905 aaPredicted RBP11.1□□□□□ -0.63
SRRM1-221ENST00000593639 SKIV2LQ15477 1246 aaKnown RBP11.1□□□□□ -0.63
SRRM1-221ENST00000593639 C12orf60Q5U649 245 aa11.1□□□□□ -0.63
SRRM1-221ENST00000593639 SLC43A3Q8NBI5 491 aa11.1□□□□□ -0.63
SRRM1-221ENST00000593639 SLF1Q9BQI6 1058 aa11.1□□□□□ -0.63
SRRM1-221ENST00000593639 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.1□□□□□ -0.63
SRRM1-221ENST00000593639 KATNBL1Q9H079 304 aa11.1□□□□□ -0.63
SRRM1-221ENST00000593639 WNT8AQ9H1J5 351 aa11.1□□□□□ -0.63
SRRM1-221ENST00000593639 MTIF3Q9H2K0 278 aaKnown RBP11.1□□□□□ -0.63
SRRM1-221ENST00000593639 ABHD16BQ9H3Z7 469 aa11.1□□□□□ -0.63
SRRM1-221ENST00000593639 KANSL2Q9H9L4 492 aa11.1□□□□□ -0.63
SRRM1-221ENST00000593639 GOPCQ9HD26 462 aa11.1□□□□□ -0.63
SRRM1-221ENST00000593639 HCN4Q9Y3Q4 1203 aa11.1□□□□□ -0.63
SRRM1-221ENST00000593639 ARIH1Q9Y4X5 557 aaPredicted RBP11.1□□□□□ -0.63
SRRM1-221ENST00000593639 TRANK1O15050 2925 aa11.1□□□□□ -0.63
SRRM1-221ENST00000593639 GRIN2DO15399 1336 aa11.09□□□□□ -0.63
SRRM1-221ENST00000593639 MYO5AQ9Y4I1 1855 aaKnown RBP11.09□□□□□ -0.63
SRRM1-221ENST00000593639 RFXAPO00287 272 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms