RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 DDX11Q96FC9 970 aa21.34■■□□□ 1.01
CIRBP-243ENST00000593128 LBHD1Q9BQE6 289 aaPredicted RBP21.34■■□□□ 1.01
CIRBP-243ENST00000593128 PRDM5Q9NQX1 630 aaPredicted RBP21.34■■□□□ 1.01
CIRBP-243ENST00000593128 MTMR4Q9NYA4 1195 aa21.34■■□□□ 1.01
CIRBP-243ENST00000593128 IGKV6D-41A0A0C4DH26 115 aa21.33■■□□□ 1.01
CIRBP-243ENST00000593128 IKQ13123 557 aaPredicted RBP21.33■■□□□ 1.01
CIRBP-243ENST00000593128 SLFN13Q68D06 897 aa21.33■■□□□ 1.01
CIRBP-243ENST00000593128 PRPF38AQ8NAV1 312 aaKnown RBP21.33■■□□□ 1.01
CIRBP-243ENST00000593128 TINF2Q9BSI4 451 aa21.33■■□□□ 1.01
CIRBP-243ENST00000593128 RAVER2Q9HCJ3 691 aaKnown RBP21.33■■□□□ 1.01
CIRBP-243ENST00000593128 RIPK3Q9Y572 518 aa21.33■■□□□ 1.01
CIRBP-243ENST00000593128 RARBP10826 455 aa21.32■■□□□ 1
CIRBP-243ENST00000593128 TAL1P17542 331 aaPredicted RBP21.32■■□□□ 1
CIRBP-243ENST00000593128 ADCYAP1R1P41586 468 aa21.32■■□□□ 1
CIRBP-243ENST00000593128 CTDSPL2Q05D32 466 aa21.32■■□□□ 1
CIRBP-243ENST00000593128 ZNF792Q3KQV3 632 aa21.32■■□□□ 1
CIRBP-243ENST00000593128 XPNPEP3Q9NQH7 507 aa21.32■■□□□ 1
CIRBP-243ENST00000593128 MTMR7Q9Y216 660 aa21.32■■□□□ 1
CIRBP-243ENST00000593128 CNPY2Q9Y2B0 182 aa21.32■■□□□ 1
CIRBP-243ENST00000593128 LRRC41Q15345 812 aa21.31■■□□□ 1
CIRBP-243ENST00000593128 NEDD1Q8NHV4 660 aa21.31■■□□□ 1
CIRBP-243ENST00000593128 LENG1Q96BZ8 264 aaPredicted RBP21.31■■□□□ 1
CIRBP-243ENST00000593128 FEM1BQ9UK73 627 aa21.31■■□□□ 1
CIRBP-243ENST00000593128 SMCHD1A6NHR9 2005 aa21.31■■□□□ 1
CIRBP-243ENST00000593128 TSPY2A6NKD2 308 aa21.3■■□□□ 1
CIRBP-243ENST00000593128 PGK1P00558 417 aa21.3■■□□□ 1
CIRBP-243ENST00000593128 BMP3P12645 472 aa21.3■■□□□ 1
CIRBP-243ENST00000593128 TRIM60Q495X7 471 aa21.3■■□□□ 1
CIRBP-243ENST00000593128 SLC39A5Q6ZMH5 540 aa21.3■■□□□ 1
CIRBP-243ENST00000593128 INCENPQ9NQS7 918 aa21.3■■□□□ 1
CIRBP-243ENST00000593128 HOMER2Q9NSB8 354 aa21.3■■□□□ 1
CIRBP-243ENST00000593128 ZHX1Q9UKY1 873 aaPredicted RBP21.3■■□□□ 1
CIRBP-243ENST00000593128 STX8Q9UNK0 236 aa21.3■■□□□ 1
CIRBP-243ENST00000593128 DIS3Q9Y2L1 958 aaKnown RBP21.3■■□□□ 1
CIRBP-243ENST00000593128 TMEM232C9JQI7 657 aa21.29■■□□□ 1
CIRBP-243ENST00000593128 ANKRD35Q8N283 1001 aa21.29■■□□□ 1
CIRBP-243ENST00000593128 GMCL1P1Q8NEA9 526 aa21.29■■□□□ 1
CIRBP-243ENST00000593128 MKL1Q969V6 931 aa21.29■■□□□ 1
CIRBP-243ENST00000593128 EVI5LQ96CN4 794 aa21.29■■□□□ 1
CIRBP-243ENST00000593128 LAMA3Q16787 3333 aa21.29■■□□□ 1
CIRBP-243ENST00000593128 AKR1A1P14550 325 aa21.28■■□□□ 1
CIRBP-243ENST00000593128 VPS53Q5VIR6 699 aa21.28■■□□□ 1
CIRBP-243ENST00000593128 Q7L0L9 218 aa21.28■■□□□ 1
CIRBP-243ENST00000593128 RNF180Q86T96 592 aa21.28■■□□□ 1
CIRBP-243ENST00000593128 SLC38A10Q9HBR0 1119 aa21.28■■□□□ 1
CIRBP-243ENST00000593128 TOMM22Q9NS69 142 aa21.28■■□□□ 1
CIRBP-243ENST00000593128 NRBP1Q9UHY1 535 aa21.28■■□□□ 1
CIRBP-243ENST00000593128 SALL3Q9BXA9 1300 aa21.28■■□□□ 1
CIRBP-243ENST00000593128 PLIN4Q96Q06 1357 aa21.27■■□□□ 1
CIRBP-243ENST00000593128 TRIM6-TRIM34B2RNG4 842 aa21.27■■□□□ 1
CIRBP-243ENST00000593128 RANBP6O60518 1105 aaKnown RBP21.27■■□□□ 1
CIRBP-243ENST00000593128 MCCP23508 829 aa21.27■■□□□ 1
CIRBP-243ENST00000593128 SLC1A4P43007 532 aa21.27■■□□□ 1
CIRBP-243ENST00000593128 PDE1AP54750 535 aa21.27■■□□□ 1
CIRBP-243ENST00000593128 DEFB123Q8N688 67 aa21.27■■□□□ 1
CIRBP-243ENST00000593128 NMT2O60551 498 aa21.26■□□□□ 0.99
CIRBP-243ENST00000593128 ZNF865P0CJ78 1059 aaPredicted RBP21.26■□□□□ 0.99
CIRBP-243ENST00000593128 STAT2P52630 851 aa21.26■□□□□ 0.99
CIRBP-243ENST00000593128 LRIT3Q3SXY7 679 aa21.26■□□□□ 0.99
CIRBP-243ENST00000593128 RRP12Q5JTH9 1297 aaKnown RBP21.26■□□□□ 0.99
CIRBP-243ENST00000593128 B4GALNT3Q6L9W6 998 aa21.26■□□□□ 0.99
CIRBP-243ENST00000593128 LNPKQ9C0E8 428 aa21.26■□□□□ 0.99
CIRBP-243ENST00000593128 LTBP2Q14767 1821 aa21.26■□□□□ 0.99
CIRBP-243ENST00000593128 FOXP2O15409 715 aa21.25■□□□□ 0.99
CIRBP-243ENST00000593128 SNAP25P60880 206 aa21.25■□□□□ 0.99
CIRBP-243ENST00000593128 HDAC1Q13547 482 aaPredicted RBP21.25■□□□□ 0.99
CIRBP-243ENST00000593128 CCDC174Q6PII3 467 aa21.25■□□□□ 0.99
CIRBP-243ENST00000593128 KCTD1Q719H9 257 aa21.25■□□□□ 0.99
CIRBP-243ENST00000593128 RILPL2Q969X0 211 aa21.25■□□□□ 0.99
CIRBP-243ENST00000593128 FAM227BQ96M60 508 aa21.25■□□□□ 0.99
CIRBP-243ENST00000593128 FBXO40Q9UH90 709 aa21.25■□□□□ 0.99
CIRBP-243ENST00000593128 SYNPO2Q9UMS6 1093 aa21.25■□□□□ 0.99
CIRBP-243ENST00000593128 ATP2A1O14983 1001 aa21.24■□□□□ 0.99
CIRBP-243ENST00000593128 CCDC96Q2M329 555 aa21.24■□□□□ 0.99
CIRBP-243ENST00000593128 PPP4R3BQ5MIZ7 849 aa21.24■□□□□ 0.99
CIRBP-243ENST00000593128 RASGRP2Q7LDG7 609 aa21.24■□□□□ 0.99
CIRBP-243ENST00000593128 CHURC1Q8WUH1 139 aa21.24■□□□□ 0.99
CIRBP-243ENST00000593128 HELLSQ9NRZ9 838 aa21.24■□□□□ 0.99
CIRBP-243ENST00000593128 FAM184BQ9ULE4 1060 aa21.24■□□□□ 0.99
CIRBP-243ENST00000593128 PHF24Q9UPV7 400 aa21.24■□□□□ 0.99
CIRBP-243ENST00000593128 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.24■□□□□ 0.99
CIRBP-243ENST00000593128 MCM3APO60318 1980 aa21.24■□□□□ 0.99
CIRBP-243ENST00000593128 SYNGAP1Q96PV0 1343 aa21.24■□□□□ 0.99
CIRBP-243ENST00000593128 DNAJC25-GNG10A0A024R161 153 aa21.23■□□□□ 0.99
CIRBP-243ENST00000593128 A0A0D9SFI3 127 aa21.23■□□□□ 0.99
CIRBP-243ENST00000593128 PQBP1O60828 265 aaKnown RBP21.23■□□□□ 0.99
CIRBP-243ENST00000593128 SNAI1O95863 264 aaPredicted RBP21.23■□□□□ 0.99
CIRBP-243ENST00000593128 FAM160B2Q86V87 743 aa21.23■□□□□ 0.99
CIRBP-243ENST00000593128 CHST13Q8NET6 341 aa21.23■□□□□ 0.99
CIRBP-243ENST00000593128 STAG1Q8WVM7 1258 aa21.23■□□□□ 0.99
CIRBP-243ENST00000593128 BADQ92934 168 aa21.23■□□□□ 0.99
CIRBP-243ENST00000593128 GMCL1Q96IK5 515 aa21.23■□□□□ 0.99
CIRBP-243ENST00000593128 AGBL1Q96MI9 1066 aa21.23■□□□□ 0.99
CIRBP-243ENST00000593128 SYNRGQ9UMZ2 1314 aa21.23■□□□□ 0.99
CIRBP-243ENST00000593128 A0A1W2PQ45 241 aaPredicted RBP21.22■□□□□ 0.99
CIRBP-243ENST00000593128 A0A1W2PQY0 241 aa21.22■□□□□ 0.99
CIRBP-243ENST00000593128 ALAS1P13196 640 aa21.22■□□□□ 0.99
CIRBP-243ENST00000593128 OAZ1P54368 228 aa21.22■□□□□ 0.99
CIRBP-243ENST00000593128 TLE2Q04725 743 aa21.22■□□□□ 0.99
CIRBP-243ENST00000593128 MCMDC2Q4G0Z9 681 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms